RNA–Protein interactions for RNA: YLR106C

MDN1, Transcript of Huge dynein-related AAA-type ATPase (midasin), yeast

Gene MDN1, Length 14,733 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDN1	YLR106C	PDI1	P17967	522 aa	Known RBP	4.26	□□□□□ -1.73
MDN1	YLR106C	NOP8	Q08287	484 aa	Predicted RBP	4.26	□□□□□ -1.73
MDN1	YLR106C	MAK21	Q12176	1025 aa	Known RBP	4.26	□□□□□ -1.73
MDN1	YLR106C	SIS2	P36024	562 aa		4.26	□□□□□ -1.73
MDN1	YLR106C	RTR1	P40084	226 aa	Predicted RBP	4.25	□□□□□ -1.73
MDN1	YLR106C	GRX4	P32642	244 aa		4.25	□□□□□ -1.73
MDN1	YLR106C	URB1	P34241	1764 aa	Known RBP	4.25	□□□□□ -1.73
MDN1	YLR106C	ALD4	P46367	519 aa	Known RBP	4.25	□□□□□ -1.73
MDN1	YLR106C	CAB1	Q04430	367 aa		4.24	□□□□□ -1.73
MDN1	YLR106C	VMR1	P38735	1592 aa		4.24	□□□□□ -1.73
MDN1	YLR106C	LEU2	P04173	364 aa	Predicted RBP	4.24	□□□□□ -1.73
MDN1	YLR106C	VPS27	P40343	622 aa	Known RBP	4.24	□□□□□ -1.73
MDN1	YLR106C	APC1	P53886	1748 aa		4.24	□□□□□ -1.73
MDN1	YLR106C	CAB3	P36076	571 aa		4.24	□□□□□ -1.73
MDN1	YLR106C	FAS2	P19097	1887 aa	Known RBP	4.24	□□□□□ -1.73
MDN1	YLR106C	ITT1	Q04638	464 aa		4.23	□□□□□ -1.73
MDN1	YLR106C	MTR4	P47047	1073 aa	Known RBP	4.23	□□□□□ -1.73
MDN1	YLR106C	ECM16	Q04217	1267 aa	Known RBP	4.22	□□□□□ -1.73
MDN1	YLR106C	PSD2	P53037	1138 aa	Known RBP	4.22	□□□□□ -1.73
MDN1	YLR106C	YDL144C	Q07589	356 aa		4.22	□□□□□ -1.73
MDN1	YLR106C	MAK10	Q02197	733 aa		4.21	□□□□□ -1.74
MDN1	YLR106C	TPM1	P17536	199 aa	Known RBP	4.21	□□□□□ -1.74
MDN1	YLR106C	CSE4	P36012	229 aa		4.21	□□□□□ -1.74
MDN1	YLR106C	SUP35	P05453	685 aa	Known RBP	4.2	□□□□□ -1.74
MDN1	YLR106C	YSP2	Q06681	1438 aa		4.2	□□□□□ -1.74
MDN1	YLR106C	TY4B-H	P0C2J7	1802 aa		4.2	□□□□□ -1.74
MDN1	YLR106C	TY4B-J	P47024	1803 aa		4.2	□□□□□ -1.74
MDN1	YLR106C	COG8	Q04632	607 aa		4.19	□□□□□ -1.74
MDN1	YLR106C	TY3B-G	Q99315	1547 aa		4.18	□□□□□ -1.74
MDN1	YLR106C	UTP10	P42945	1769 aa	Known RBP	4.18	□□□□□ -1.74
MDN1	YLR106C	MEC3	Q02574	474 aa		4.18	□□□□□ -1.74
MDN1	YLR106C	NSE3	Q05541	303 aa		4.18	□□□□□ -1.74
MDN1	YLR106C	IOC4	Q04213	475 aa		4.18	□□□□□ -1.74
MDN1	YLR106C	RRP5	Q05022	1729 aa	Known RBP	4.18	□□□□□ -1.74
MDN1	YLR106C	RIM15	P43565	1770 aa		4.18	□□□□□ -1.74
MDN1	YLR106C	ZDS1	P50111	915 aa	Known RBP	4.17	□□□□□ -1.74
MDN1	YLR106C	RTG3	P38165	486 aa		4.17	□□□□□ -1.74
MDN1	YLR106C	RCM1	P53972	490 aa		4.17	□□□□□ -1.74
MDN1	YLR106C	MAM1	P40065	302 aa		4.17	□□□□□ -1.74
MDN1	YLR106C	ENP2	P48234	707 aa	Known RBP	4.17	□□□□□ -1.74
MDN1	YLR106C	DPS1	P04802	557 aa	Known RBP	4.16	□□□□□ -1.74
MDN1	YLR106C	MIF2	P35201	549 aa		4.16	□□□□□ -1.74
MDN1	YLR106C	AOS1	Q06624	347 aa		4.16	□□□□□ -1.74
MDN1	YLR106C	FKH1	P40466	484 aa		4.16	□□□□□ -1.74
MDN1	YLR106C	YJL181W	P46987	611 aa		4.16	□□□□□ -1.74
MDN1	YLR106C	NCB2	Q92317	146 aa		4.16	□□□□□ -1.74
MDN1	YLR106C	TAP42	Q04372	366 aa		4.16	□□□□□ -1.74
MDN1	YLR106C	TYS1	P36421	394 aa	Known RBP	4.16	□□□□□ -1.74
MDN1	YLR106C	RPC31	P17890	251 aa		4.15	□□□□□ -1.74
MDN1	YLR106C	RAD9	P14737	1309 aa		4.15	□□□□□ -1.74
MDN1	YLR106C	CTF4	Q01454	927 aa		4.15	□□□□□ -1.74
MDN1	YLR106C	YNR029C	P53729	429 aa	Known RBP	4.15	□□□□□ -1.75
MDN1	YLR106C	DAL5	P15365	543 aa		4.14	□□□□□ -1.75
MDN1	YLR106C	YLR419W	Q06698	1435 aa	Known RBP	4.14	□□□□□ -1.75
MDN1	YLR106C	GYP7	P48365	746 aa		4.14	□□□□□ -1.75
MDN1	YLR106C	TPD3	P31383	635 aa		4.14	□□□□□ -1.75
MDN1	YLR106C	YPR148C	Q06523	435 aa		4.13	□□□□□ -1.75
MDN1	YLR106C	GAS4	Q08271	471 aa		4.13	□□□□□ -1.75
MDN1	YLR106C	KRI1	P42846	591 aa	Known RBP	4.13	□□□□□ -1.75
MDN1	YLR106C	IML1	P47170	1584 aa		4.13	□□□□□ -1.75
MDN1	YLR106C	PKH1	Q03407	766 aa		4.12	□□□□□ -1.75
MDN1	YLR106C	PRS1	P32895	427 aa	Known RBP	4.12	□□□□□ -1.75
MDN1	YLR106C	ATG13	Q06628	738 aa		4.12	□□□□□ -1.75
MDN1	YLR106C	KRE5	P22023	1365 aa		4.12	□□□□□ -1.75
MDN1	YLR106C	RVB2	Q12464	471 aa	Known RBP	4.12	□□□□□ -1.75
MDN1	YLR106C	TCB1	Q12466	1186 aa		4.12	□□□□□ -1.75
MDN1	YLR106C	UGA3	P26370	528 aa		4.11	□□□□□ -1.75
MDN1	YLR106C	BDP1	P46678	594 aa		4.11	□□□□□ -1.75
MDN1	YLR106C	MDG1	P53885	366 aa		4.11	□□□□□ -1.75
MDN1	YLR106C	RPS24A	P0CX31	135 aa	Known RBP	4.11	□□□□□ -1.75
MDN1	YLR106C	RPS24B	P0CX32	135 aa	Known RBP	4.11	□□□□□ -1.75
MDN1	YLR106C	EBP2	P36049	427 aa	Known RBP	4.11	□□□□□ -1.75
MDN1	YLR106C	CPS1	P27614	576 aa		4.11	□□□□□ -1.75
MDN1	YLR106C	PRP45	P28004	379 aa	Predicted RBP	4.11	□□□□□ -1.75
MDN1	YLR106C	PSK1	P31374	1356 aa		4.11	□□□□□ -1.75
MDN1	YLR106C	LAM6	Q08001	693 aa		4.11	□□□□□ -1.75
MDN1	YLR106C	MPP10	P47083	593 aa	Known RBP	4.1	□□□□□ -1.75
MDN1	YLR106C	PRP40	P33203	583 aa	Known RBP	4.1	□□□□□ -1.75
MDN1	YLR106C	NMD2	P38798	1089 aa	Known RBP	4.1	□□□□□ -1.75
MDN1	YLR106C	PRP5	P21372	849 aa	Predicted RBP	4.1	□□□□□ -1.75
MDN1	YLR106C	PUF6	Q04373	656 aa	Known RBP	4.1	□□□□□ -1.75
MDN1	YLR106C	UBP1	P25037	809 aa		4.09	□□□□□ -1.75
MDN1	YLR106C	KCC4	P25389	1037 aa		4.09	□□□□□ -1.75
MDN1	YLR106C	RPO41	P13433	1351 aa	Known RBP	4.09	□□□□□ -1.75
MDN1	YLR106C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
MDN1	YLR106C	HGH1	P48362	394 aa	Known RBP	4.09	□□□□□ -1.75
MDN1	YLR106C	YEF3	P16521	1044 aa	Known RBP	4.09	□□□□□ -1.75
MDN1	YLR106C	RRT14	P40470	206 aa		4.09	□□□□□ -1.75
MDN1	YLR106C	VPS24	P36095	224 aa	Known RBP	4.09	□□□□□ -1.75
MDN1	YLR106C	SSF1	P38789	453 aa	Predicted RBP	4.09	□□□□□ -1.75
MDN1	YLR106C	ETT1	Q08421	412 aa	Known RBP	4.09	□□□□□ -1.75
MDN1	YLR106C	LEO1	P38439	464 aa		4.09	□□□□□ -1.76
MDN1	YLR106C	AKL1	P38080	1108 aa	Known RBP	4.08	□□□□□ -1.76
MDN1	YLR106C	YML133C	Q03099	1374 aa		4.08	□□□□□ -1.76
MDN1	YLR106C	YLL067C	Q07888	1374 aa		4.08	□□□□□ -1.76
MDN1	YLR106C	YLL066C	Q99208	1374 aa		4.08	□□□□□ -1.76
MDN1	YLR106C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.08	□□□□□ -1.76
MDN1	YLR106C	PRD1	P25375	712 aa		4.08	□□□□□ -1.76
MDN1	YLR106C	YBR287W	P38355	427 aa		4.08	□□□□□ -1.76
MDN1	YLR106C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms