RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C TY1A-JR2P47099 440 aa8.1□□□□□ -1.11
NYV1YLR093C TY1A-DR1Q03856 440 aa8.1□□□□□ -1.11
NYV1YLR093C TY1A-ML1Q04706 440 aaKnown RBP8.1□□□□□ -1.11
NYV1YLR093C TY1A-BRQ12217 440 aa8.1□□□□□ -1.11
NYV1YLR093C TY1A-NL2Q12470 440 aa8.1□□□□□ -1.11
NYV1YLR093C TY1A-GR2Q12485 440 aa8.1□□□□□ -1.11
NYV1YLR093C DSF2P38213 736 aa8.09□□□□□ -1.11
NYV1YLR093C SEC2P17065 759 aa8.08□□□□□ -1.12
NYV1YLR093C MAM3Q12296 706 aa8.08□□□□□ -1.12
NYV1YLR093C TRK1P12685 1235 aa8.07□□□□□ -1.12
NYV1YLR093C ERG12P07277 443 aa8.06□□□□□ -1.12
NYV1YLR093C GCD11P32481 527 aaKnown RBP8.06□□□□□ -1.12
NYV1YLR093C CLB5P30283 435 aa8.05□□□□□ -1.12
NYV1YLR093C SPT16P32558 1035 aaKnown RBP8.02□□□□□ -1.13
NYV1YLR093C IES2P40154 320 aa8.01□□□□□ -1.13
NYV1YLR093C PAT1P25644 796 aaKnown RBP7.99□□□□□ -1.13
NYV1YLR093C CST6P40535 587 aa7.99□□□□□ -1.13
NYV1YLR093C NUP42P49686 430 aaKnown RBP7.98□□□□□ -1.13
NYV1YLR093C LAM6Q08001 693 aa7.98□□□□□ -1.13
NYV1YLR093C RRN7P40992 514 aa7.97□□□□□ -1.13
NYV1YLR093C KEX2P13134 814 aa7.96□□□□□ -1.14
NYV1YLR093C RTF1P53064 558 aa7.96□□□□□ -1.14
NYV1YLR093C ERF2Q06551 359 aa7.94□□□□□ -1.14
NYV1YLR093C SIT4P20604 311 aa7.92□□□□□ -1.14
NYV1YLR093C SPB4P25808 606 aaPredicted RBP7.92□□□□□ -1.14
NYV1YLR093C BDP1P46678 594 aa7.91□□□□□ -1.14
NYV1YLR093C TEA1P47988 759 aa7.91□□□□□ -1.14
NYV1YLR093C AGE1Q04412 482 aa7.9□□□□□ -1.14
NYV1YLR093C CLA4P48562 842 aa7.89□□□□□ -1.15
NYV1YLR093C YNL115CP53925 644 aa7.89□□□□□ -1.15
NYV1YLR093C FRK1Q03002 865 aaPredicted RBP7.89□□□□□ -1.15
NYV1YLR093C PAC1P39946 494 aaKnown RBP7.88□□□□□ -1.15
NYV1YLR093C AIR1P40507 360 aaKnown RBP7.88□□□□□ -1.15
NYV1YLR093C CDC4P07834 779 aa7.87□□□□□ -1.15
NYV1YLR093C MOD5P07884 428 aa7.87□□□□□ -1.15
NYV1YLR093C DIT2P21595 489 aa7.87□□□□□ -1.15
NYV1YLR093C TUB4P53378 473 aa7.86□□□□□ -1.15
NYV1YLR093C HED1Q03937 162 aa7.86□□□□□ -1.15
NYV1YLR093C BRE2P43132 505 aa7.85□□□□□ -1.15
NYV1YLR093C NIS1P53939 407 aa7.84□□□□□ -1.15
NYV1YLR093C RGA1P39083 1007 aa7.82□□□□□ -1.16
NYV1YLR093C GCR2Q01722 534 aa7.82□□□□□ -1.16
NYV1YLR093C TPD3P31383 635 aa7.8□□□□□ -1.16
NYV1YLR093C FPK1P53739 893 aa7.78□□□□□ -1.16
NYV1YLR093C KXD1P53158 218 aa7.76□□□□□ -1.17
NYV1YLR093C YMR196WQ04336 1088 aa7.76□□□□□ -1.17
NYV1YLR093C SLY41P22215 453 aa7.74□□□□□ -1.17
NYV1YLR093C YNR021WP53723 404 aaKnown RBP7.74□□□□□ -1.17
NYV1YLR093C RRD1P40454 393 aaKnown RBP7.73□□□□□ -1.17
NYV1YLR093C HXT10P43581 546 aa7.73□□□□□ -1.17
NYV1YLR093C HST2P53686 357 aa7.73□□□□□ -1.17
NYV1YLR093C MET32Q12041 191 aa7.73□□□□□ -1.17
NYV1YLR093C RGA2Q06407 1009 aa7.72□□□□□ -1.17
NYV1YLR093C PDC1P06169 563 aaKnown RBP7.71□□□□□ -1.18
NYV1YLR093C AFT1P22149 690 aa7.71□□□□□ -1.18
NYV1YLR093C PUS5Q06244 254 aa7.71□□□□□ -1.18
NYV1YLR093C PUS6P53294 404 aa7.7□□□□□ -1.18
NYV1YLR093C ATF2P53296 535 aa7.7□□□□□ -1.18
NYV1YLR093C RQC2Q12532 1038 aaKnown RBP7.7□□□□□ -1.18
NYV1YLR093C RPA14P50106 137 aa7.69□□□□□ -1.18
NYV1YLR093C ASH1P34233 588 aa7.68□□□□□ -1.18
NYV1YLR093C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
NYV1YLR093C YPL062WQ02781 134 aa7.68□□□□□ -1.18
NYV1YLR093C TBF1Q02457 562 aa7.67□□□□□ -1.18
NYV1YLR093C YPR097WQ06839 1073 aa7.67□□□□□ -1.18
NYV1YLR093C ALR1Q08269 859 aa7.67□□□□□ -1.18
NYV1YLR093C HST3P53687 447 aa7.66□□□□□ -1.18
NYV1YLR093C SYH1Q02875 849 aaKnown RBP7.66□□□□□ -1.18
NYV1YLR093C ENV9Q08651 330 aa7.66□□□□□ -1.18
NYV1YLR093C MMP1Q12372 583 aa7.66□□□□□ -1.18
NYV1YLR093C MET22P32179 357 aa7.65□□□□□ -1.18
NYV1YLR093C GLN1P32288 370 aaKnown RBP7.65□□□□□ -1.18
NYV1YLR093C YDL206WQ12424 762 aa7.65□□□□□ -1.18
NYV1YLR093C TRM1P15565 570 aaKnown RBP7.64□□□□□ -1.19
NYV1YLR093C GLC3P32775 704 aa7.64□□□□□ -1.19
NYV1YLR093C AIM7Q12156 149 aa7.64□□□□□ -1.19
NYV1YLR093C SCJ1P25303 377 aa7.63□□□□□ -1.19
NYV1YLR093C MSB3P48566 633 aaPredicted RBP7.62□□□□□ -1.19
NYV1YLR093C GAR1P28007 205 aaKnown RBP7.61□□□□□ -1.19
NYV1YLR093C YDR444WQ04093 687 aa7.59□□□□□ -1.19
NYV1YLR093C ESS1P22696 170 aa7.58□□□□□ -1.2
NYV1YLR093C LCB5Q06147 687 aaKnown RBP7.58□□□□□ -1.2
NYV1YLR093C GBP2P25555 427 aaKnown RBP RIP-Chip data7.57□□□□□ -1.2not detected
NYV1YLR093C RTT106P40161 455 aa7.57□□□□□ -1.2
NYV1YLR093C YJR115WP47152 169 aa7.57□□□□□ -1.2
NYV1YLR093C KIP2P28743 706 aa7.56□□□□□ -1.2
NYV1YLR093C MRT4P33201 236 aaKnown RBP7.56□□□□□ -1.2
NYV1YLR093C RSC30P38781 883 aa7.56□□□□□ -1.2
NYV1YLR093C IXR1P33417 597 aa7.55□□□□□ -1.2
NYV1YLR093C YJU3P28321 313 aa7.53□□□□□ -1.2
NYV1YLR093C VAC17P25591 423 aa7.52□□□□□ -1.21
NYV1YLR093C KTR1P27810 393 aaKnown RBP7.52□□□□□ -1.21
NYV1YLR093C TYW1Q08960 810 aaKnown RBP7.52□□□□□ -1.21
NYV1YLR093C UGA3P26370 528 aa7.51□□□□□ -1.21
NYV1YLR093C CSN12P47130 423 aa7.5□□□□□ -1.21
NYV1YLR093C PKH3Q03306 898 aaPredicted RBP7.49□□□□□ -1.21
NYV1YLR093C PTK2P47116 818 aaKnown RBP7.48□□□□□ -1.21
NYV1YLR093C YDL176WQ12027 708 aa7.48□□□□□ -1.21
NYV1YLR093C LEU3P08638 886 aa7.46□□□□□ -1.22
NYV1YLR093C ARG8P18544 423 aa7.44□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms