RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C TY1A-PR1P0CX58 440 aa10.36□□□□□ -0.75
SED5YLR026C TY1A-ORP0CX59 440 aa10.36□□□□□ -0.75
SED5YLR026C TY1A-PR2P0CX60 440 aa10.36□□□□□ -0.75
SED5YLR026C TY1A-DR5P0CX65 440 aa10.36□□□□□ -0.75
SED5YLR026C TY1A-ER2P0CX66 440 aa10.36□□□□□ -0.75
SED5YLR026C TY1A-GR3P0CX67 440 aa10.36□□□□□ -0.75
SED5YLR026C TY1A-LR1P0CX68 440 aa10.36□□□□□ -0.75
SED5YLR026C TY1A-MR2P0CX69 440 aa10.36□□□□□ -0.75
SED5YLR026C TY1A-JR2P47099 440 aa10.36□□□□□ -0.75
SED5YLR026C TY1A-DR1Q03856 440 aa10.36□□□□□ -0.75
SED5YLR026C TY1A-ML1Q04706 440 aaKnown RBP10.36□□□□□ -0.75
SED5YLR026C TY1A-BRQ12217 440 aa10.36□□□□□ -0.75
SED5YLR026C TY1A-NL2Q12470 440 aa10.36□□□□□ -0.75
SED5YLR026C TY1A-GR2Q12485 440 aa10.36□□□□□ -0.75
SED5YLR026C SEC2P17065 759 aa10.34□□□□□ -0.75
SED5YLR026C NIS1P53939 407 aa10.34□□□□□ -0.75
SED5YLR026C SAS4Q04003 481 aa10.33□□□□□ -0.76
SED5YLR026C DPS1P04802 557 aaKnown RBP10.29□□□□□ -0.76
SED5YLR026C SDH2P21801 266 aa10.29□□□□□ -0.76
SED5YLR026C SIT4P20604 311 aa10.27□□□□□ -0.77
SED5YLR026C FPK1P53739 893 aa10.27□□□□□ -0.77
SED5YLR026C RRN7P40992 514 aa10.25□□□□□ -0.77
SED5YLR026C YNL115CP53925 644 aa10.25□□□□□ -0.77
SED5YLR026C YMR196WQ04336 1088 aa10.25□□□□□ -0.77
SED5YLR026C AIM7Q12156 149 aa10.25□□□□□ -0.77
SED5YLR026C RAS1P01119 309 aa10.23□□□□□ -0.77
SED5YLR026C SPT16P32558 1035 aaKnown RBP10.23□□□□□ -0.77
SED5YLR026C SCJ1P25303 377 aa10.21□□□□□ -0.77
SED5YLR026C RTF1P53064 558 aa10.21□□□□□ -0.77
SED5YLR026C MRF1P30775 413 aaPredicted RBP10.2□□□□□ -0.78
SED5YLR026C RPN1P38764 993 aaKnown RBP10.19□□□□□ -0.78
SED5YLR026C KIN1P13185 1064 aa10.17□□□□□ -0.78
SED5YLR026C SLY41P22215 453 aa10.17□□□□□ -0.78
SED5YLR026C AMS1P22855 1083 aa10.17□□□□□ -0.78
SED5YLR026C TUB4P53378 473 aa10.17□□□□□ -0.78
SED5YLR026C AGE1Q04412 482 aa10.17□□□□□ -0.78
SED5YLR026C TYW1Q08960 810 aaKnown RBP10.17□□□□□ -0.78
SED5YLR026C ERG12P07277 443 aa10.16□□□□□ -0.78
SED5YLR026C PAT1P25644 796 aaKnown RBP10.16□□□□□ -0.78
SED5YLR026C PAC1P39946 494 aaKnown RBP10.16□□□□□ -0.78
SED5YLR026C HST2P53686 357 aa10.16□□□□□ -0.78
SED5YLR026C YEL077CQ3E7X8 1277 aa10.15□□□□□ -0.78
SED5YLR026C MMP1Q12372 583 aa10.14□□□□□ -0.79
SED5YLR026C GLN1P32288 370 aaKnown RBP10.12□□□□□ -0.79
SED5YLR026C ESS1P22696 170 aa10.11□□□□□ -0.79
SED5YLR026C KTR1P27810 393 aaKnown RBP10.11□□□□□ -0.79
SED5YLR026C CST6P40535 587 aa10.11□□□□□ -0.79
SED5YLR026C CSN12P47130 423 aa10.08□□□□□ -0.8
SED5YLR026C YJU3P28321 313 aa10.07□□□□□ -0.8
SED5YLR026C FRK1Q03002 865 aaPredicted RBP10.07□□□□□ -0.8
SED5YLR026C BDP1P46678 594 aa10.05□□□□□ -0.8
SED5YLR026C LAM6Q08001 693 aa10.05□□□□□ -0.8
SED5YLR026C TRM1P15565 570 aaKnown RBP10.04□□□□□ -0.8
SED5YLR026C PUS6P53294 404 aa10.04□□□□□ -0.8
SED5YLR026C PKH3Q03306 898 aaPredicted RBP10.02□□□□□ -0.81
SED5YLR026C SRC1Q03707 834 aa10.02□□□□□ -0.81
SED5YLR026C MOD5P07884 428 aa10.01□□□□□ -0.81
SED5YLR026C TBF1Q02457 562 aa10.01□□□□□ -0.81
SED5YLR026C GUA1P38625 525 aaKnown RBP10□□□□□ -0.81
SED5YLR026C CLA4P48562 842 aa9.99□□□□□ -0.81
SED5YLR026C YDL206WQ12424 762 aa9.99□□□□□ -0.81
SED5YLR026C KXD1P53158 218 aa9.98□□□□□ -0.81
SED5YLR026C PDC1P06169 563 aaKnown RBP9.97□□□□□ -0.81
SED5YLR026C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.97□□□□□ -0.81not detected
SED5YLR026C PUS5Q06244 254 aa9.96□□□□□ -0.82
SED5YLR026C ARG8P18544 423 aa9.95□□□□□ -0.82
SED5YLR026C RSC30P38781 883 aa9.94□□□□□ -0.82
SED5YLR026C HXT10P43581 546 aa9.94□□□□□ -0.82
SED5YLR026C RPA14P50106 137 aa9.94□□□□□ -0.82
SED5YLR026C AIR1P40507 360 aaKnown RBP9.93□□□□□ -0.82
SED5YLR026C ALR1Q08269 859 aa9.93□□□□□ -0.82
SED5YLR026C SSA2P10592 639 aaKnown RBP9.92□□□□□ -0.82
SED5YLR026C YPR097WQ06839 1073 aa9.91□□□□□ -0.82
SED5YLR026C RAD59Q12223 238 aa9.91□□□□□ -0.82
SED5YLR026C TPD3P31383 635 aa9.89□□□□□ -0.83
SED5YLR026C RRD1P40454 393 aaKnown RBP9.89□□□□□ -0.83
SED5YLR026C TRK1P12685 1235 aa9.88□□□□□ -0.83
SED5YLR026C LEO1P38439 464 aa9.87□□□□□ -0.83
SED5YLR026C HED1Q03937 162 aa9.85□□□□□ -0.83
SED5YLR026C HPC2Q01448 625 aa9.82□□□□□ -0.84
SED5YLR026C CDC4P07834 779 aa9.8□□□□□ -0.84
SED5YLR026C TFB3Q03290 321 aa9.8□□□□□ -0.84
SED5YLR026C KIP2P28743 706 aa9.78□□□□□ -0.84
SED5YLR026C SYH1Q02875 849 aaKnown RBP9.78□□□□□ -0.84
SED5YLR026C MET32Q12041 191 aa9.78□□□□□ -0.84
SED5YLR026C PKC1P24583 1151 aa9.76□□□□□ -0.85
SED5YLR026C BRL1P38770 471 aa9.76□□□□□ -0.85
SED5YLR026C IXR1P33417 597 aa9.75□□□□□ -0.85
SED5YLR026C ITT1Q04638 464 aa9.74□□□□□ -0.85
SED5YLR026C VAC17P25591 423 aa9.73□□□□□ -0.85
SED5YLR026C MAK16P10962 306 aaPredicted RBP9.71□□□□□ -0.86
SED5YLR026C ASH1P34233 588 aa9.71□□□□□ -0.86
SED5YLR026C YBL036CP38197 257 aa9.7□□□□□ -0.86
SED5YLR026C FIG4P42837 879 aa9.7□□□□□ -0.86
SED5YLR026C BRE2P43132 505 aa9.67□□□□□ -0.86
SED5YLR026C HST3P53687 447 aa9.67□□□□□ -0.86
SED5YLR026C AFT1P22149 690 aa9.65□□□□□ -0.86
SED5YLR026C CSE4P36012 229 aa9.65□□□□□ -0.86
SED5YLR026C TEC1P18412 486 aa9.64□□□□□ -0.87
SED5YLR026C APP1P53933 587 aa9.63□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms