RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W UBP9P39967 754 aa10.02□□□□□ -0.81
SNF7YLR025W ATH1P48016 1211 aa10.02□□□□□ -0.81
SNF7YLR025W GYP5Q12344 894 aa10.02□□□□□ -0.81
SNF7YLR025W GUT1P32190 709 aa10.01□□□□□ -0.81
SNF7YLR025W PAF1P38351 445 aa10□□□□□ -0.81
SNF7YLR025W YOL036WQ08206 761 aa9.99□□□□□ -0.81
SNF7YLR025W MSB4Q12317 492 aa9.99□□□□□ -0.81
SNF7YLR025W ABP1P15891 592 aaKnown RBP9.98□□□□□ -0.81
SNF7YLR025W GDB1Q06625 1536 aa9.97□□□□□ -0.81
SNF7YLR025W SET4P42948 560 aa9.96□□□□□ -0.82
SNF7YLR025W WSC3Q12215 556 aa9.96□□□□□ -0.82
SNF7YLR025W ARO1P08566 1588 aaKnown RBP9.96□□□□□ -0.82
SNF7YLR025W PDR10P51533 1564 aa9.96□□□□□ -0.82
SNF7YLR025W SPB4P25808 606 aaPredicted RBP9.95□□□□□ -0.82
SNF7YLR025W MMS1Q06211 1407 aa9.95□□□□□ -0.82
SNF7YLR025W MET5P47169 1442 aa9.94□□□□□ -0.82
SNF7YLR025W LEU3P08638 886 aa9.94□□□□□ -0.82
SNF7YLR025W YBL029C-AQ3E756 94 aa9.94□□□□□ -0.82
SNF7YLR025W PDR12Q02785 1511 aa9.93□□□□□ -0.82
SNF7YLR025W REF2P42073 533 aaPredicted RBP9.93□□□□□ -0.82
SNF7YLR025W VNX1P42839 908 aa9.92□□□□□ -0.82
SNF7YLR025W SPO14P36126 1683 aa9.91□□□□□ -0.82
SNF7YLR025W EAP1P36041 632 aaKnown RBP9.91□□□□□ -0.82
SNF7YLR025W DCW1P36091 449 aa9.9□□□□□ -0.82
SNF7YLR025W HTA1P04911 132 aaKnown RBP9.89□□□□□ -0.83
SNF7YLR025W HTA2P04912 132 aa9.89□□□□□ -0.83
SNF7YLR025W PBS2P08018 668 aa9.89□□□□□ -0.83
SNF7YLR025W BUD3P25558 1636 aa9.89□□□□□ -0.83
SNF7YLR025W SEC3P33332 1336 aaKnown RBP9.88□□□□□ -0.83
SNF7YLR025W GCN2P15442 1659 aa9.88□□□□□ -0.83
SNF7YLR025W ENP1P38333 483 aaKnown RBP9.87□□□□□ -0.83
SNF7YLR025W BNR1P40450 1375 aa9.87□□□□□ -0.83
SNF7YLR025W DSF2P38213 736 aa9.85□□□□□ -0.83
SNF7YLR025W TIF11P38912 153 aaKnown RBP9.85□□□□□ -0.83
SNF7YLR025W YGR273CP53329 174 aa9.85□□□□□ -0.83
SNF7YLR025W SPP1Q03012 353 aa9.85□□□□□ -0.83
SNF7YLR025W YRF1-1P0CX20 1796 aa9.85□□□□□ -0.83
SNF7YLR025W YRF1-5P0CX21 1796 aa9.85□□□□□ -0.83
SNF7YLR025W YRF1-8P0CX22 1796 aa9.85□□□□□ -0.83
SNF7YLR025W IQG1Q12280 1495 aa9.85□□□□□ -0.83
SNF7YLR025W MAK21Q12176 1025 aaKnown RBP9.84□□□□□ -0.83
SNF7YLR025W YSP2Q06681 1438 aa9.83□□□□□ -0.84
SNF7YLR025W SOL3P38858 249 aa9.83□□□□□ -0.84
SNF7YLR025W ORC1P54784 914 aaPredicted RBP9.83□□□□□ -0.84
SNF7YLR025W BUD31P25337 157 aaPredicted RBP9.82□□□□□ -0.84
SNF7YLR025W LEO1P38439 464 aa9.82□□□□□ -0.84
SNF7YLR025W UBP14P38237 781 aaKnown RBP9.81□□□□□ -0.84
SNF7YLR025W ULI1P43604 169 aa9.81□□□□□ -0.84
SNF7YLR025W TRP5P00931 707 aaKnown RBP9.8□□□□□ -0.84
SNF7YLR025W COX6P00427 148 aa9.79□□□□□ -0.84
SNF7YLR025W VHR2P40041 505 aa9.79□□□□□ -0.84
SNF7YLR025W SPT7P35177 1332 aa9.79□□□□□ -0.84
SNF7YLR025W NOP2P40991 618 aaKnown RBP9.78□□□□□ -0.84
SNF7YLR025W NST1P53935 1240 aa9.78□□□□□ -0.84
SNF7YLR025W YEL023CP39992 682 aa9.77□□□□□ -0.85
SNF7YLR025W YLR326WQ06170 240 aaKnown RBP9.77□□□□□ -0.85
SNF7YLR025W SCT1P32784 759 aa9.76□□□□□ -0.85
SNF7YLR025W PTC4P38089 393 aa9.76□□□□□ -0.85
SNF7YLR025W MAM3Q12296 706 aa9.76□□□□□ -0.85
SNF7YLR025W JIP4Q03361 876 aa9.75□□□□□ -0.85
SNF7YLR025W IOC2Q12072 812 aa9.75□□□□□ -0.85
SNF7YLR025W AI4P03878 556 aa9.74□□□□□ -0.85
SNF7YLR025W KEX1P09620 729 aa9.74□□□□□ -0.85
SNF7YLR025W MPH3P0CE00 602 aa9.74□□□□□ -0.85
SNF7YLR025W YDR090CQ03193 310 aa9.74□□□□□ -0.85
SNF7YLR025W SEC7P11075 2009 aaKnown RBP9.73□□□□□ -0.85
SNF7YLR025W LTE1P07866 1435 aa9.73□□□□□ -0.85
SNF7YLR025W RPN1P38764 993 aaKnown RBP9.72□□□□□ -0.85
SNF7YLR025W DRS2P39524 1355 aa9.72□□□□□ -0.85
SNF7YLR025W TAF5P38129 798 aa9.71□□□□□ -0.86
SNF7YLR025W KIC1P38692 1080 aa9.71□□□□□ -0.86
SNF7YLR025W MHP1P43638 1398 aa9.71□□□□□ -0.86
SNF7YLR025W RAD54P32863 898 aa9.7□□□□□ -0.86
SNF7YLR025W ESL2P36168 1195 aa9.69□□□□□ -0.86
SNF7YLR025W YNL035CP53962 389 aaKnown RBP9.69□□□□□ -0.86
SNF7YLR025W URN1Q06525 465 aaKnown RBP9.69□□□□□ -0.86
SNF7YLR025W TRM3Q07527 1436 aa9.68□□□□□ -0.86
SNF7YLR025W DAN4P47179 1161 aa9.68□□□□□ -0.86
SNF7YLR025W YOR093CQ12275 1648 aa9.67□□□□□ -0.86
SNF7YLR025W RTC1Q08281 1341 aa9.67□□□□□ -0.86
SNF7YLR025W PCS60P38137 543 aaKnown RBP RIP-Chip data9.67□□□□□ -0.86not detected
SNF7YLR025W IES2P40154 320 aa9.67□□□□□ -0.86
SNF7YLR025W RAV1P47104 1357 aa9.66□□□□□ -0.86
SNF7YLR025W LDB19Q12502 818 aa9.66□□□□□ -0.86
SNF7YLR025W PDR5P33302 1511 aaKnown RBP9.65□□□□□ -0.86
SNF7YLR025W NUP42P49686 430 aaKnown RBP9.64□□□□□ -0.87
SNF7YLR025W KIP3P53086 805 aaKnown RBP9.64□□□□□ -0.87
SNF7YLR025W CHC1P22137 1653 aaKnown RBP9.64□□□□□ -0.87
SNF7YLR025W ILV3P39522 585 aaKnown RBP9.63□□□□□ -0.87
SNF7YLR025W YNR021WP53723 404 aaKnown RBP9.63□□□□□ -0.87
SNF7YLR025W DOP1Q03921 1698 aa9.62□□□□□ -0.87
SNF7YLR025W RTG1P32607 177 aa9.62□□□□□ -0.87
SNF7YLR025W SEC61P32915 480 aa9.62□□□□□ -0.87
SNF7YLR025W PDS5Q04264 1277 aa9.62□□□□□ -0.87
SNF7YLR025W DIT2P21595 489 aa9.6□□□□□ -0.87
SNF7YLR025W NAP1P25293 417 aaKnown RBP9.6□□□□□ -0.87
SNF7YLR025W SLI15P38283 698 aa9.58□□□□□ -0.88
SNF7YLR025W NCR1Q12200 1170 aa9.57□□□□□ -0.88
SNF7YLR025W IML1P47170 1584 aa9.57□□□□□ -0.88
SNF7YLR025W TFG1P41895 735 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms