RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W TFB4Q12004 338 aa2.23□□□□□ -2.05
PRP16YKR086W MOD5P07884 428 aa2.22□□□□□ -2.05
PRP16YKR086W SIT4P20604 311 aa2.22□□□□□ -2.05
PRP16YKR086W DIT2P21595 489 aa2.22□□□□□ -2.05
PRP16YKR086W PSE1P32337 1089 aaKnown RBP2.22□□□□□ -2.05
PRP16YKR086W CKB1P43639 278 aa2.22□□□□□ -2.05
PRP16YKR086W TUM1Q08686 304 aaKnown RBP2.22□□□□□ -2.05
PRP16YKR086W YRR1Q12172 810 aa2.22□□□□□ -2.05
PRP16YKR086W NUD1P32336 851 aa2.21□□□□□ -2.06
PRP16YKR086W YMR196WQ04336 1088 aa2.21□□□□□ -2.06
PRP16YKR086W DPS1P04802 557 aaKnown RBP2.21□□□□□ -2.06
PRP16YKR086W CST6P40535 587 aa2.2□□□□□ -2.06
PRP16YKR086W SWR1Q05471 1514 aa2.2□□□□□ -2.06
PRP16YKR086W AMS1P22855 1083 aa2.19□□□□□ -2.06
PRP16YKR086W IES2P40154 320 aa2.19□□□□□ -2.06
PRP16YKR086W NIS1P53939 407 aa2.19□□□□□ -2.06
PRP16YKR086W YPR109WQ06104 294 aa2.19□□□□□ -2.06
PRP16YKR086W CLA4P48562 842 aa2.19□□□□□ -2.06
PRP16YKR086W SAS4Q04003 481 aa2.19□□□□□ -2.06
PRP16YKR086W LAM6Q08001 693 aa2.19□□□□□ -2.06
PRP16YKR086W MAM3Q12296 706 aa2.19□□□□□ -2.06
PRP16YKR086W PRT1P06103 763 aaKnown RBP2.19□□□□□ -2.06
PRP16YKR086W NPL4P33755 580 aa2.19□□□□□ -2.06
PRP16YKR086W PAC1P39946 494 aaKnown RBP2.18□□□□□ -2.06
PRP16YKR086W KOG1P38873 1557 aa2.18□□□□□ -2.06
PRP16YKR086W KTR1P27810 393 aaKnown RBP2.18□□□□□ -2.06
PRP16YKR086W KEX2P13134 814 aa2.17□□□□□ -2.06
PRP16YKR086W AIR1P40507 360 aaKnown RBP2.17□□□□□ -2.06
PRP16YKR086W RSC30P38781 883 aa2.17□□□□□ -2.06
PRP16YKR086W GLC3P32775 704 aa2.16□□□□□ -2.06
PRP16YKR086W TUB4P53378 473 aa2.16□□□□□ -2.06
PRP16YKR086W TPD3P31383 635 aa2.16□□□□□ -2.06
PRP16YKR086W HGH1P48362 394 aaKnown RBP2.16□□□□□ -2.06
PRP16YKR086W RPL34BP40525 121 aaKnown RBP2.15□□□□□ -2.06
PRP16YKR086W RTF1P53064 558 aa2.15□□□□□ -2.06
PRP16YKR086W SSK2P53599 1579 aa2.15□□□□□ -2.06
PRP16YKR086W BDP1P46678 594 aa2.15□□□□□ -2.07
PRP16YKR086W FPK1P53739 893 aa2.15□□□□□ -2.07
PRP16YKR086W GCD11P32481 527 aaKnown RBP2.14□□□□□ -2.07
PRP16YKR086W GYP1Q08484 637 aa2.14□□□□□ -2.07
PRP16YKR086W TY1B-DR4Q07793 1604 aa2.14□□□□□ -2.07
PRP16YKR086W HST2P53686 357 aa2.14□□□□□ -2.07
PRP16YKR086W RGA2Q06407 1009 aa2.14□□□□□ -2.07
PRP16YKR086W RRN7P40992 514 aa2.13□□□□□ -2.07
PRP16YKR086W YNR021WP53723 404 aaKnown RBP2.13□□□□□ -2.07
PRP16YKR086W YNL115CP53925 644 aa2.13□□□□□ -2.07
PRP16YKR086W TBF1Q02457 562 aa2.13□□□□□ -2.07
PRP16YKR086W SCJ1P25303 377 aa2.13□□□□□ -2.07
PRP16YKR086W CLB5P30283 435 aa2.13□□□□□ -2.07
PRP16YKR086W MET32Q12041 191 aa2.13□□□□□ -2.07
PRP16YKR086W PDC1P06169 563 aaKnown RBP2.12□□□□□ -2.07
PRP16YKR086W TEA1P47988 759 aa2.12□□□□□ -2.07
PRP16YKR086W AIM7Q12156 149 aa2.12□□□□□ -2.07
PRP16YKR086W RRD1P40454 393 aaKnown RBP2.12□□□□□ -2.07
PRP16YKR086W LEU3P08638 886 aa2.12□□□□□ -2.07
PRP16YKR086W RPN1P38764 993 aaKnown RBP2.12□□□□□ -2.07
PRP16YKR086W INO80P53115 1489 aa2.11□□□□□ -2.07
PRP16YKR086W RGA1P39083 1007 aa2.11□□□□□ -2.07
PRP16YKR086W YPR084WQ06821 456 aa2.11□□□□□ -2.07
PRP16YKR086W TRK1P12685 1235 aa2.11□□□□□ -2.07
PRP16YKR086W YJU3P28321 313 aa2.11□□□□□ -2.07
PRP16YKR086W MRF1P30775 413 aaPredicted RBP2.11□□□□□ -2.07
PRP16YKR086W HED1Q03937 162 aa2.11□□□□□ -2.07
PRP16YKR086W HXT10P43581 546 aa2.1□□□□□ -2.07
PRP16YKR086W YDL176WQ12027 708 aa2.1□□□□□ -2.07
PRP16YKR086W PAT1P25644 796 aaKnown RBP2.1□□□□□ -2.07
PRP16YKR086W YPR097WQ06839 1073 aa2.1□□□□□ -2.07
PRP16YKR086W TRM1P15565 570 aaKnown RBP2.1□□□□□ -2.07
PRP16YKR086W ARG8P18544 423 aa2.1□□□□□ -2.07
PRP16YKR086W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
PRP16YKR086W TYW1Q08960 810 aaKnown RBP2.1□□□□□ -2.07
PRP16YKR086W TCB3Q03640 1545 aaKnown RBP2.09□□□□□ -2.07
PRP16YKR086W CDC4P07834 779 aa2.09□□□□□ -2.07
PRP16YKR086W PUS5Q06244 254 aa2.09□□□□□ -2.07
PRP16YKR086W THO2P53552 1597 aaKnown RBP2.09□□□□□ -2.07
PRP16YKR086W KIN1P13185 1064 aa2.09□□□□□ -2.08
PRP16YKR086W MRT4P33201 236 aaKnown RBP2.09□□□□□ -2.08
PRP16YKR086W BRL1P38770 471 aa2.09□□□□□ -2.08
PRP16YKR086W RPA14P50106 137 aa2.09□□□□□ -2.08
PRP16YKR086W PKH3Q03306 898 aaPredicted RBP2.09□□□□□ -2.08
PRP16YKR086W YEL077CQ3E7X8 1277 aa2.09□□□□□ -2.08
PRP16YKR086W ESS1P22696 170 aa2.08□□□□□ -2.08
PRP16YKR086W SPT16P32558 1035 aaKnown RBP2.08□□□□□ -2.08
PRP16YKR086W VAC17P25591 423 aa2.08□□□□□ -2.08
PRP16YKR086W FRK1Q03002 865 aaPredicted RBP2.08□□□□□ -2.08
PRP16YKR086W ERG12P07277 443 aa2.08□□□□□ -2.08
PRP16YKR086W AFT1P22149 690 aa2.08□□□□□ -2.08
PRP16YKR086W SLY41P22215 453 aa2.08□□□□□ -2.08
PRP16YKR086W YBL036CP38197 257 aa2.08□□□□□ -2.08
PRP16YKR086W APL6P46682 809 aa2.08□□□□□ -2.08
PRP16YKR086W DMA2P53924 522 aa2.08□□□□□ -2.08
PRP16YKR086W YDL206WQ12424 762 aa2.08□□□□□ -2.08
PRP16YKR086W GBP2P25555 427 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
PRP16YKR086W CSN12P47130 423 aa2.07□□□□□ -2.08
PRP16YKR086W PUS6P53294 404 aa2.07□□□□□ -2.08
PRP16YKR086W GUA1P38625 525 aaKnown RBP2.06□□□□□ -2.08
PRP16YKR086W ITT1Q04638 464 aa2.06□□□□□ -2.08
PRP16YKR086W MMP1Q12372 583 aa2.06□□□□□ -2.08
PRP16YKR086W GLN1P32288 370 aaKnown RBP2.06□□□□□ -2.08
PRP16YKR086W YJL007CP47080 104 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms