RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W PSE1P32337 1089 aaKnown RBP7.7□□□□□ -1.18
SWD2YKL018W CLA4P48562 842 aa7.7□□□□□ -1.18
SWD2YKL018W YPR109WQ06104 294 aa7.7□□□□□ -1.18
SWD2YKL018W BUD20Q08004 166 aaPredicted RBP7.68□□□□□ -1.18
SWD2YKL018W NUD1P32336 851 aa7.67□□□□□ -1.18
SWD2YKL018W CST6P40535 587 aa7.67□□□□□ -1.18
SWD2YKL018W CDC4P07834 779 aa7.65□□□□□ -1.18
SWD2YKL018W NUP42P49686 430 aaKnown RBP7.65□□□□□ -1.18
SWD2YKL018W DIT2P21595 489 aa7.64□□□□□ -1.19
SWD2YKL018W CLB5P30283 435 aa7.63□□□□□ -1.19
SWD2YKL018W LAM6Q08001 693 aa7.63□□□□□ -1.19
SWD2YKL018W YDR444WQ04093 687 aa7.62□□□□□ -1.19
SWD2YKL018W GCD11P32481 527 aaKnown RBP7.61□□□□□ -1.19
SWD2YKL018W TEA1P47988 759 aa7.61□□□□□ -1.19
SWD2YKL018W STR2P47164 639 aa7.6□□□□□ -1.19
SWD2YKL018W ISM1P48526 1002 aa7.6□□□□□ -1.19
SWD2YKL018W ATF2P53296 535 aa7.59□□□□□ -1.19
SWD2YKL018W YDL176WQ12027 708 aa7.57□□□□□ -1.2
SWD2YKL018W MTC5Q03897 1148 aa7.56□□□□□ -1.2
SWD2YKL018W SPT16P32558 1035 aaKnown RBP7.54□□□□□ -1.2
SWD2YKL018W YNR021WP53723 404 aaKnown RBP7.54□□□□□ -1.2
SWD2YKL018W PAT1P25644 796 aaKnown RBP7.53□□□□□ -1.2
SWD2YKL018W LCB5Q06147 687 aaKnown RBP7.53□□□□□ -1.2
SWD2YKL018W KEX2P13134 814 aa7.52□□□□□ -1.21
SWD2YKL018W GLC3P32775 704 aa7.52□□□□□ -1.21
SWD2YKL018W FRK1Q03002 865 aaPredicted RBP7.52□□□□□ -1.21
SWD2YKL018W YMR196WQ04336 1088 aa7.52□□□□□ -1.21
SWD2YKL018W RRN7P40992 514 aa7.49□□□□□ -1.21
SWD2YKL018W NIS1P53939 407 aa7.48□□□□□ -1.21
SWD2YKL018W HED1Q03937 162 aa7.48□□□□□ -1.21
SWD2YKL018W TY1A-DR4O74302 440 aa7.47□□□□□ -1.21
SWD2YKL018W LEU3P08638 886 aa7.47□□□□□ -1.21
SWD2YKL018W TY1A-HP0C2I4 478 aaKnown RBP7.47□□□□□ -1.21
SWD2YKL018W TY1A-AP0CX57 440 aa7.47□□□□□ -1.21
SWD2YKL018W TY1A-PR1P0CX58 440 aa7.47□□□□□ -1.21
SWD2YKL018W TY1A-ORP0CX59 440 aa7.47□□□□□ -1.21
SWD2YKL018W TY1A-PR2P0CX60 440 aa7.47□□□□□ -1.21
SWD2YKL018W TY1A-DR5P0CX65 440 aa7.47□□□□□ -1.21
SWD2YKL018W TY1A-ER2P0CX66 440 aa7.47□□□□□ -1.21
SWD2YKL018W TY1A-GR3P0CX67 440 aa7.47□□□□□ -1.21
SWD2YKL018W TY1A-LR1P0CX68 440 aa7.47□□□□□ -1.21
SWD2YKL018W TY1A-MR2P0CX69 440 aa7.47□□□□□ -1.21
SWD2YKL018W SEC2P17065 759 aa7.47□□□□□ -1.21
SWD2YKL018W TY1A-JR2P47099 440 aa7.47□□□□□ -1.21
SWD2YKL018W TY1A-DR1Q03856 440 aa7.47□□□□□ -1.21
SWD2YKL018W TY1A-ML1Q04706 440 aaKnown RBP7.47□□□□□ -1.21
SWD2YKL018W ERF2Q06551 359 aa7.47□□□□□ -1.21
SWD2YKL018W TY1A-BRQ12217 440 aa7.47□□□□□ -1.21
SWD2YKL018W TY1A-NL2Q12470 440 aa7.47□□□□□ -1.21
SWD2YKL018W TY1A-GR2Q12485 440 aa7.47□□□□□ -1.21
SWD2YKL018W YNL115CP53925 644 aa7.46□□□□□ -1.22
SWD2YKL018W BDP1P46678 594 aa7.45□□□□□ -1.22
SWD2YKL018W RTF1P53064 558 aa7.45□□□□□ -1.22
SWD2YKL018W FPK1P53739 893 aa7.44□□□□□ -1.22
SWD2YKL018W SIT4P20604 311 aa7.43□□□□□ -1.22
SWD2YKL018W AIM7Q12156 149 aa7.43□□□□□ -1.22
SWD2YKL018W SLY41P22215 453 aa7.42□□□□□ -1.22
SWD2YKL018W TUB4P53378 473 aa7.39□□□□□ -1.23
SWD2YKL018W GLN1P32288 370 aaKnown RBP7.38□□□□□ -1.23
SWD2YKL018W RPN1P38764 993 aaKnown RBP7.38□□□□□ -1.23
SWD2YKL018W TBF1Q02457 562 aa7.38□□□□□ -1.23
SWD2YKL018W MMP1Q12372 583 aa7.38□□□□□ -1.23
SWD2YKL018W SCJ1P25303 377 aa7.36□□□□□ -1.23
SWD2YKL018W ASH1P34233 588 aa7.36□□□□□ -1.23
SWD2YKL018W PAC1P39946 494 aaKnown RBP7.36□□□□□ -1.23
SWD2YKL018W HST2P53686 357 aa7.36□□□□□ -1.23
SWD2YKL018W AFT1P22149 690 aa7.35□□□□□ -1.23
SWD2YKL018W KIN1P13185 1064 aa7.34□□□□□ -1.23
SWD2YKL018W RRD1P40454 393 aaKnown RBP7.34□□□□□ -1.23
SWD2YKL018W CSN12P47130 423 aa7.33□□□□□ -1.24
SWD2YKL018W KXD1P53158 218 aa7.33□□□□□ -1.24
SWD2YKL018W AGE1Q04412 482 aa7.33□□□□□ -1.24
SWD2YKL018W TYW1Q08960 810 aaKnown RBP7.33□□□□□ -1.24
SWD2YKL018W ESS1P22696 170 aa7.32□□□□□ -1.24
SWD2YKL018W PUS6P53294 404 aa7.32□□□□□ -1.24
SWD2YKL018W MET32Q12041 191 aa7.32□□□□□ -1.24
SWD2YKL018W HST3P53687 447 aa7.31□□□□□ -1.24
SWD2YKL018W PKH3Q03306 898 aaPredicted RBP7.29□□□□□ -1.24
SWD2YKL018W TRM1P15565 570 aaKnown RBP7.28□□□□□ -1.24
SWD2YKL018W YDL206WQ12424 762 aa7.28□□□□□ -1.24
SWD2YKL018W ALR1Q08269 859 aa7.27□□□□□ -1.25
SWD2YKL018W SSA2P10592 639 aaKnown RBP7.26□□□□□ -1.25
SWD2YKL018W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
SWD2YKL018W ARG8P18544 423 aa7.25□□□□□ -1.25
SWD2YKL018W YJU3P28321 313 aa7.25□□□□□ -1.25
SWD2YKL018W TRK2P28584 889 aa7.25□□□□□ -1.25
SWD2YKL018W HXT10P43581 546 aa7.25□□□□□ -1.25
SWD2YKL018W CAF120P53836 1060 aa7.25□□□□□ -1.25
SWD2YKL018W MOD5P07884 428 aa7.24□□□□□ -1.25
SWD2YKL018W RPA14P50106 137 aa7.24□□□□□ -1.25
SWD2YKL018W PUS5Q06244 254 aa7.24□□□□□ -1.25
SWD2YKL018W PDC1P06169 563 aaKnown RBP7.23□□□□□ -1.25
SWD2YKL018W ACO2P39533 789 aa7.23□□□□□ -1.25
SWD2YKL018W KTR1P27810 393 aaKnown RBP7.22□□□□□ -1.25
SWD2YKL018W YJR115WP47152 169 aa7.22□□□□□ -1.25
SWD2YKL018W YPR097WQ06839 1073 aa7.21□□□□□ -1.26
SWD2YKL018W KIP2P28743 706 aa7.2□□□□□ -1.26
SWD2YKL018W TPD3P31383 635 aa7.19□□□□□ -1.26
SWD2YKL018W YGR035CP53222 116 aa7.19□□□□□ -1.26
SWD2YKL018W SYH1Q02875 849 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms