RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeastyeast

Gene RPL39, Length 156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL39YJL189W YPR109WQ06104 294 aa5.98□□□□□ -1.45
RPL39YJL189W RGR1P19263 1082 aa5.97□□□□□ -1.45
RPL39YJL189W CST6P40535 587 aa5.97□□□□□ -1.45
RPL39YJL189W MRF1P30775 413 aaPredicted RBP5.96□□□□□ -1.46
RPL39YJL189W CLA4P48562 842 aa5.96□□□□□ -1.46
RPL39YJL189W ERG12P07277 443 aa5.95□□□□□ -1.46
RPL39YJL189W AIR1P40507 360 aaKnown RBP5.95□□□□□ -1.46
RPL39YJL189W MAK21Q12176 1025 aaKnown RBP5.95□□□□□ -1.46
RPL39YJL189W ERF2Q06551 359 aa5.94□□□□□ -1.46
RPL39YJL189W RRN7P40992 514 aa5.93□□□□□ -1.46
RPL39YJL189W SPT16P32558 1035 aaKnown RBP5.92□□□□□ -1.46
RPL39YJL189W PBS2P08018 668 aa5.91□□□□□ -1.46
RPL39YJL189W KEX2P13134 814 aa5.91□□□□□ -1.46
RPL39YJL189W FRK1Q03002 865 aaPredicted RBP5.91□□□□□ -1.46
RPL39YJL189W LAM6Q08001 693 aa5.9□□□□□ -1.46
RPL39YJL189W RGA1P39083 1007 aa5.88□□□□□ -1.47
RPL39YJL189W BDP1P46678 594 aa5.86□□□□□ -1.47
RPL39YJL189W DMA1P38823 416 aa5.84□□□□□ -1.47
RPL39YJL189W CKB1P43639 278 aa5.84□□□□□ -1.47
RPL39YJL189W PAC1P39946 494 aaKnown RBP5.83□□□□□ -1.48
RPL39YJL189W RGA2Q06407 1009 aa5.83□□□□□ -1.48
RPL39YJL189W PSE1P32337 1089 aaKnown RBP5.81□□□□□ -1.48
RPL39YJL189W IES2P40154 320 aa5.81□□□□□ -1.48
RPL39YJL189W BRE2P43132 505 aa5.81□□□□□ -1.48
RPL39YJL189W MAM3Q12296 706 aa5.81□□□□□ -1.48
RPL39YJL189W PAT1P25644 796 aaKnown RBP5.8□□□□□ -1.48
RPL39YJL189W AGE1Q04412 482 aa5.79□□□□□ -1.48
RPL39YJL189W GAR1P28007 205 aaKnown RBP5.78□□□□□ -1.48
RPL39YJL189W TUB4P53378 473 aa5.78□□□□□ -1.48
RPL39YJL189W PUS5Q06244 254 aa5.78□□□□□ -1.48
RPL39YJL189W CDC4P07834 779 aa5.77□□□□□ -1.49
RPL39YJL189W DSF2P38213 736 aa5.76□□□□□ -1.49
RPL39YJL189W NUP42P49686 430 aaKnown RBP5.76□□□□□ -1.49
RPL39YJL189W MOD5P07884 428 aa5.75□□□□□ -1.49
RPL39YJL189W DIT2P21595 489 aa5.75□□□□□ -1.49
RPL39YJL189W SAS10Q12136 610 aaPredicted RBP5.75□□□□□ -1.49
RPL39YJL189W GCR2Q01722 534 aa5.74□□□□□ -1.49
RPL39YJL189W HED1Q03937 162 aa5.74□□□□□ -1.49
RPL39YJL189W SPB4P25808 606 aaPredicted RBP5.73□□□□□ -1.49
RPL39YJL189W YNL115CP53925 644 aa5.73□□□□□ -1.49
RPL39YJL189W NIS1P53939 407 aa5.73□□□□□ -1.49
RPL39YJL189W MET32Q12041 191 aa5.73□□□□□ -1.49
RPL39YJL189W CLB5P30283 435 aa5.72□□□□□ -1.49
RPL39YJL189W TEA1P47988 759 aa5.72□□□□□ -1.49
RPL39YJL189W YPL062WQ02781 134 aa5.72□□□□□ -1.49
RPL39YJL189W SIT4P20604 311 aa5.71□□□□□ -1.5
RPL39YJL189W GBP2P25555 427 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
RPL39YJL189W ASH1P34233 588 aa5.7□□□□□ -1.5
RPL39YJL189W MET22P32179 357 aa5.69□□□□□ -1.5
RPL39YJL189W RTF1P53064 558 aa5.69□□□□□ -1.5
RPL39YJL189W SLY41P22215 453 aa5.67□□□□□ -1.5
RPL39YJL189W SCJ1P25303 377 aa5.67□□□□□ -1.5
RPL39YJL189W FPK1P53739 893 aa5.67□□□□□ -1.5
RPL39YJL189W KXD1P53158 218 aa5.64□□□□□ -1.51
RPL39YJL189W PDC1P06169 563 aaKnown RBP5.63□□□□□ -1.51
RPL39YJL189W AFT1P22149 690 aa5.63□□□□□ -1.51
RPL39YJL189W HST3P53687 447 aa5.63□□□□□ -1.51
RPL39YJL189W YMR196WQ04336 1088 aa5.63□□□□□ -1.51
RPL39YJL189W HXT10P43581 546 aa5.62□□□□□ -1.51
RPL39YJL189W YDR444WQ04093 687 aa5.62□□□□□ -1.51
RPL39YJL189W ENV9Q08651 330 aa5.62□□□□□ -1.51
RPL39YJL189W YJR115WP47152 169 aa5.61□□□□□ -1.51
RPL39YJL189W RRD1P40454 393 aaKnown RBP5.6□□□□□ -1.51
RPL39YJL189W YDL206WQ12424 762 aa5.6□□□□□ -1.51
RPL39YJL189W TRM1P15565 570 aaKnown RBP5.57□□□□□ -1.52
RPL39YJL189W TPD3P31383 635 aa5.57□□□□□ -1.52
RPL39YJL189W PUS6P53294 404 aa5.57□□□□□ -1.52
RPL39YJL189W SYH1Q02875 849 aaKnown RBP5.57□□□□□ -1.52
RPL39YJL189W ESS1P22696 170 aa5.56□□□□□ -1.52
RPL39YJL189W TBF1Q02457 562 aa5.56□□□□□ -1.52
RPL39YJL189W LCB5Q06147 687 aaKnown RBP5.56□□□□□ -1.52
RPL39YJL189W TYW1Q08960 810 aaKnown RBP5.56□□□□□ -1.52
RPL39YJL189W HST2P53686 357 aa5.55□□□□□ -1.52
RPL39YJL189W YDL176WQ12027 708 aa5.55□□□□□ -1.52
RPL39YJL189W MMP1Q12372 583 aa5.55□□□□□ -1.52
RPL39YJL189W YJU3P28321 313 aa5.54□□□□□ -1.52
RPL39YJL189W KIP2P28743 706 aa5.54□□□□□ -1.52
RPL39YJL189W GLC3P32775 704 aa5.54□□□□□ -1.52
RPL39YJL189W RPA14P50106 137 aa5.54□□□□□ -1.52
RPL39YJL189W ATF2P53296 535 aa5.54□□□□□ -1.52
RPL39YJL189W ITT1Q04638 464 aa5.54□□□□□ -1.52
RPL39YJL189W YPR097WQ06839 1073 aa5.54□□□□□ -1.52
RPL39YJL189W ALR1Q08269 859 aa5.54□□□□□ -1.52
RPL39YJL189W IXR1P33417 597 aa5.52□□□□□ -1.53
RPL39YJL189W UGA3P26370 528 aa5.51□□□□□ -1.53
RPL39YJL189W GLN1P32288 370 aaKnown RBP5.51□□□□□ -1.53
RPL39YJL189W MSB3P48566 633 aaPredicted RBP5.51□□□□□ -1.53
RPL39YJL189W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
RPL39YJL189W PTK2P47116 818 aaKnown RBP5.49□□□□□ -1.53
RPL39YJL189W KTR1P27810 393 aaKnown RBP5.48□□□□□ -1.53
RPL39YJL189W CAF120P53836 1060 aa5.47□□□□□ -1.53
RPL39YJL189W OPT2Q06593 877 aa5.47□□□□□ -1.53
RPL39YJL189W SRF1Q12516 437 aa5.47□□□□□ -1.53
RPL39YJL189W MRT4P33201 236 aaKnown RBP5.46□□□□□ -1.54
RPL39YJL189W RSC30P38781 883 aa5.45□□□□□ -1.54
RPL39YJL189W YNR021WP53723 404 aaKnown RBP5.45□□□□□ -1.54
RPL39YJL189W APP1P53933 587 aa5.45□□□□□ -1.54
RPL39YJL189W PKH3Q03306 898 aaPredicted RBP5.45□□□□□ -1.54
RPL39YJL189W VAC17P25591 423 aa5.43□□□□□ -1.54
RPL39YJL189W ARG8P18544 423 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms