RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W TY1A-JR2P47099 440 aa5.44□□□□□ -1.54
MSL1YIR009W TY1A-DR1Q03856 440 aa5.44□□□□□ -1.54
MSL1YIR009W TY1A-ML1Q04706 440 aaKnown RBP5.44□□□□□ -1.54
MSL1YIR009W TY1A-BRQ12217 440 aa5.44□□□□□ -1.54
MSL1YIR009W TY1A-NL2Q12470 440 aa5.44□□□□□ -1.54
MSL1YIR009W TY1A-GR2Q12485 440 aa5.44□□□□□ -1.54
MSL1YIR009W SEC2P17065 759 aa5.42□□□□□ -1.54
MSL1YIR009W MRF1P30775 413 aaPredicted RBP5.42□□□□□ -1.54
MSL1YIR009W GCD11P32481 527 aaKnown RBP5.41□□□□□ -1.54
MSL1YIR009W IES2P40154 320 aa5.41□□□□□ -1.54
MSL1YIR009W YEL077CQ3E7X8 1277 aa5.41□□□□□ -1.54
MSL1YIR009W NUP42P49686 430 aaKnown RBP5.4□□□□□ -1.54
MSL1YIR009W ERG12P07277 443 aa5.37□□□□□ -1.55
MSL1YIR009W KEX2P13134 814 aa5.37□□□□□ -1.55
MSL1YIR009W SPB4P25808 606 aaPredicted RBP5.37□□□□□ -1.55
MSL1YIR009W CLB5P30283 435 aa5.37□□□□□ -1.55
MSL1YIR009W ERF2Q06551 359 aa5.37□□□□□ -1.55
MSL1YIR009W SPT16P32558 1035 aaKnown RBP5.36□□□□□ -1.55
MSL1YIR009W TRK1P12685 1235 aa5.35□□□□□ -1.55
MSL1YIR009W DIT2P21595 489 aa5.35□□□□□ -1.55
MSL1YIR009W CST6P40535 587 aa5.35□□□□□ -1.55
MSL1YIR009W RRN7P40992 514 aa5.35□□□□□ -1.55
MSL1YIR009W LAM6Q08001 693 aa5.33□□□□□ -1.56
MSL1YIR009W PAT1P25644 796 aaKnown RBP5.32□□□□□ -1.56
MSL1YIR009W TEA1P47988 759 aa5.32□□□□□ -1.56
MSL1YIR009W SIT4P20604 311 aa5.31□□□□□ -1.56
MSL1YIR009W RTF1P53064 558 aa5.31□□□□□ -1.56
MSL1YIR009W AGE1Q04412 482 aa5.31□□□□□ -1.56
MSL1YIR009W PAC1P39946 494 aaKnown RBP5.3□□□□□ -1.56
MSL1YIR009W BDP1P46678 594 aa5.29□□□□□ -1.56
MSL1YIR009W CLA4P48562 842 aa5.29□□□□□ -1.56
MSL1YIR009W YNL115CP53925 644 aa5.29□□□□□ -1.56
MSL1YIR009W NIS1P53939 407 aa5.29□□□□□ -1.56
MSL1YIR009W AIR1P40507 360 aaKnown RBP5.28□□□□□ -1.56
MSL1YIR009W TUB4P53378 473 aa5.28□□□□□ -1.56
MSL1YIR009W FRK1Q03002 865 aaPredicted RBP5.28□□□□□ -1.56
MSL1YIR009W MOD5P07884 428 aa5.27□□□□□ -1.57
MSL1YIR009W FPK1P53739 893 aa5.25□□□□□ -1.57
MSL1YIR009W RQC2Q12532 1038 aaKnown RBP5.24□□□□□ -1.57
MSL1YIR009W CDC4P07834 779 aa5.23□□□□□ -1.57
MSL1YIR009W HED1Q03937 162 aa5.23□□□□□ -1.57
MSL1YIR009W YNR021WP53723 404 aaKnown RBP5.22□□□□□ -1.57
MSL1YIR009W SLY41P22215 453 aa5.21□□□□□ -1.58
MSL1YIR009W BRE2P43132 505 aa5.21□□□□□ -1.58
MSL1YIR009W YMR196WQ04336 1088 aa5.21□□□□□ -1.58
MSL1YIR009W ATF2P53296 535 aa5.2□□□□□ -1.58
MSL1YIR009W HST2P53686 357 aa5.2□□□□□ -1.58
MSL1YIR009W TPD3P31383 635 aa5.19□□□□□ -1.58
MSL1YIR009W GLC3P32775 704 aa5.19□□□□□ -1.58
MSL1YIR009W PUS5Q06244 254 aa5.19□□□□□ -1.58
MSL1YIR009W SCJ1P25303 377 aa5.18□□□□□ -1.58
MSL1YIR009W KXD1P53158 218 aa5.18□□□□□ -1.58
MSL1YIR009W PDC1P06169 563 aaKnown RBP5.17□□□□□ -1.58
MSL1YIR009W HXT10P43581 546 aa5.17□□□□□ -1.58
MSL1YIR009W GCR2Q01722 534 aa5.17□□□□□ -1.58
MSL1YIR009W MET32Q12041 191 aa5.17□□□□□ -1.58
MSL1YIR009W RRD1P40454 393 aaKnown RBP5.16□□□□□ -1.58
MSL1YIR009W PUS6P53294 404 aa5.16□□□□□ -1.58
MSL1YIR009W MMP1Q12372 583 aa5.16□□□□□ -1.58
MSL1YIR009W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
MSL1YIR009W RPA14P50106 137 aa5.15□□□□□ -1.59
MSL1YIR009W TRM1P15565 570 aaKnown RBP5.14□□□□□ -1.59
MSL1YIR009W GLN1P32288 370 aaKnown RBP5.14□□□□□ -1.59
MSL1YIR009W RGA1P39083 1007 aa5.14□□□□□ -1.59
MSL1YIR009W TBF1Q02457 562 aa5.14□□□□□ -1.59
MSL1YIR009W YPR097WQ06839 1073 aa5.14□□□□□ -1.59
MSL1YIR009W AIM7Q12156 149 aa5.14□□□□□ -1.59
MSL1YIR009W YDL206WQ12424 762 aa5.14□□□□□ -1.59
MSL1YIR009W AFT1P22149 690 aa5.13□□□□□ -1.59
MSL1YIR009W ESS1P22696 170 aa5.13□□□□□ -1.59
MSL1YIR009W ASH1P34233 588 aa5.13□□□□□ -1.59
MSL1YIR009W ALR1Q08269 859 aa5.13□□□□□ -1.59
MSL1YIR009W TYW1Q08960 810 aaKnown RBP5.12□□□□□ -1.59
MSL1YIR009W SYH1Q02875 849 aaKnown RBP5.11□□□□□ -1.59
MSL1YIR009W KTR1P27810 393 aaKnown RBP5.1□□□□□ -1.59
MSL1YIR009W YJU3P28321 313 aa5.1□□□□□ -1.59
MSL1YIR009W HST3P53687 447 aa5.1□□□□□ -1.59
MSL1YIR009W MET22P32179 357 aa5.09□□□□□ -1.59
MSL1YIR009W RSC30P38781 883 aa5.09□□□□□ -1.59
MSL1YIR009W GAR1P28007 205 aaKnown RBP5.07□□□□□ -1.6
MSL1YIR009W ENV9Q08651 330 aa5.07□□□□□ -1.6
MSL1YIR009W LEU3P08638 886 aa5.06□□□□□ -1.6
MSL1YIR009W KIP2P28743 706 aa5.06□□□□□ -1.6
MSL1YIR009W CSN12P47130 423 aa5.06□□□□□ -1.6
MSL1YIR009W YJR115WP47152 169 aa5.06□□□□□ -1.6
MSL1YIR009W MSB3P48566 633 aaPredicted RBP5.06□□□□□ -1.6
MSL1YIR009W YPL062WQ02781 134 aa5.06□□□□□ -1.6
MSL1YIR009W PKH3Q03306 898 aaPredicted RBP5.06□□□□□ -1.6
MSL1YIR009W MRT4P33201 236 aaKnown RBP5.05□□□□□ -1.6
MSL1YIR009W IXR1P33417 597 aa5.05□□□□□ -1.6
MSL1YIR009W RGA2Q06407 1009 aa5.05□□□□□ -1.6
MSL1YIR009W VAC17P25591 423 aa5.04□□□□□ -1.6
MSL1YIR009W YDR444WQ04093 687 aa5.04□□□□□ -1.6
MSL1YIR009W LCB5Q06147 687 aaKnown RBP5.03□□□□□ -1.6
MSL1YIR009W KIN1P13185 1064 aa5.02□□□□□ -1.61
MSL1YIR009W ARG8P18544 423 aa5.02□□□□□ -1.61
MSL1YIR009W GBP2P25555 427 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
MSL1YIR009W UGA3P26370 528 aa5.01□□□□□ -1.61
MSL1YIR009W RAD59Q12223 238 aa5.01□□□□□ -1.61
MSL1YIR009W PTK2P47116 818 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms