RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C TFB4Q12004 338 aa8.4□□□□□ -1.06
SDS3YIL084C ORC6P38826 435 aa8.39□□□□□ -1.07
SDS3YIL084C BRE2P43132 505 aa8.37□□□□□ -1.07
SDS3YIL084C LAM6Q08001 693 aa8.36□□□□□ -1.07
SDS3YIL084C GCD11P32481 527 aaKnown RBP8.35□□□□□ -1.07
SDS3YIL084C REF2P42073 533 aaPredicted RBP8.35□□□□□ -1.07
SDS3YIL084C SAS10Q12136 610 aaPredicted RBP8.33□□□□□ -1.08
SDS3YIL084C GAR1P28007 205 aaKnown RBP8.32□□□□□ -1.08
SDS3YIL084C NPL4P33755 580 aa8.32□□□□□ -1.08
SDS3YIL084C SPT16P32558 1035 aaKnown RBP8.31□□□□□ -1.08
SDS3YIL084C IFH1P39520 1085 aa8.31□□□□□ -1.08
SDS3YIL084C FRK1Q03002 865 aaPredicted RBP8.31□□□□□ -1.08
SDS3YIL084C YPR148CQ06523 435 aa8.3□□□□□ -1.08
SDS3YIL084C MVP1P40959 511 aaKnown RBP8.29□□□□□ -1.08
SDS3YIL084C RRN7P40992 514 aa8.27□□□□□ -1.09
SDS3YIL084C BDP1P46678 594 aa8.26□□□□□ -1.09
SDS3YIL084C GCR2Q01722 534 aa8.26□□□□□ -1.09
SDS3YIL084C YPR109WQ06104 294 aa8.24□□□□□ -1.09
SDS3YIL084C CDC4P07834 779 aa8.23□□□□□ -1.09
SDS3YIL084C ERF2Q06551 359 aa8.23□□□□□ -1.09
SDS3YIL084C COX6P00427 148 aa8.22□□□□□ -1.09
SDS3YIL084C RGR1P19263 1082 aa8.22□□□□□ -1.09
SDS3YIL084C VPS70P47161 811 aa8.22□□□□□ -1.09
SDS3YIL084C GBP2P25555 427 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
SDS3YIL084C MET22P32179 357 aa8.19□□□□□ -1.1
SDS3YIL084C KEX2P13134 814 aa8.18□□□□□ -1.1
SDS3YIL084C CKB1P43639 278 aa8.15□□□□□ -1.1
SDS3YIL084C HED1Q03937 162 aa8.14□□□□□ -1.11
SDS3YIL084C MAK21Q12176 1025 aaKnown RBP8.14□□□□□ -1.11
SDS3YIL084C INO80P53115 1489 aa8.13□□□□□ -1.11
SDS3YIL084C PAC1P39946 494 aaKnown RBP8.12□□□□□ -1.11
SDS3YIL084C MON2P48563 1636 aaPredicted RBP8.11□□□□□ -1.11
SDS3YIL084C PAT1P25644 796 aaKnown RBP8.11□□□□□ -1.11
SDS3YIL084C ENV9Q08651 330 aa8.11□□□□□ -1.11
SDS3YIL084C MET32Q12041 191 aa8.1□□□□□ -1.11
SDS3YIL084C MOD5P07884 428 aa8.09□□□□□ -1.11
SDS3YIL084C LEU3P08638 886 aa8.08□□□□□ -1.12
SDS3YIL084C PUS5Q06244 254 aa8.07□□□□□ -1.12
SDS3YIL084C SPB4P25808 606 aaPredicted RBP8.06□□□□□ -1.12
SDS3YIL084C ASH1P34233 588 aa8.06□□□□□ -1.12
SDS3YIL084C YDR444WQ04093 687 aa8.06□□□□□ -1.12
SDS3YIL084C AGE1Q04412 482 aa8.06□□□□□ -1.12
SDS3YIL084C YDL176WQ12027 708 aa8.03□□□□□ -1.12
SDS3YIL084C TUB4P53378 473 aa8.02□□□□□ -1.13
SDS3YIL084C LEO1P38439 464 aa8.01□□□□□ -1.13
SDS3YIL084C AFT1P22149 690 aa8□□□□□ -1.13
SDS3YIL084C LCB5Q06147 687 aaKnown RBP7.99□□□□□ -1.13
SDS3YIL084C PBS2P08018 668 aa7.97□□□□□ -1.13
SDS3YIL084C PSE1P32337 1089 aaKnown RBP7.96□□□□□ -1.14
SDS3YIL084C HST3P53687 447 aa7.96□□□□□ -1.14
SDS3YIL084C RRD1P40454 393 aaKnown RBP7.95□□□□□ -1.14
SDS3YIL084C YJR115WP47152 169 aa7.94□□□□□ -1.14
SDS3YIL084C DSF2P38213 736 aa7.93□□□□□ -1.14
SDS3YIL084C YNL115CP53925 644 aa7.9□□□□□ -1.14
SDS3YIL084C MAM3Q12296 706 aa7.89□□□□□ -1.15
SDS3YIL084C RPN1P38764 993 aaKnown RBP7.88□□□□□ -1.15
SDS3YIL084C RTF1P53064 558 aa7.88□□□□□ -1.15
SDS3YIL084C SIT4P20604 311 aa7.86□□□□□ -1.15
SDS3YIL084C CLB5P30283 435 aa7.86□□□□□ -1.15
SDS3YIL084C NIS1P53939 407 aa7.83□□□□□ -1.16
SDS3YIL084C PDC1P06169 563 aaKnown RBP7.81□□□□□ -1.16
SDS3YIL084C TPD3P31383 635 aa7.81□□□□□ -1.16
SDS3YIL084C IES2P40154 320 aa7.81□□□□□ -1.16
SDS3YIL084C HXT10P43581 546 aa7.81□□□□□ -1.16
SDS3YIL084C KXD1P53158 218 aa7.8□□□□□ -1.16
SDS3YIL084C CAF120P53836 1060 aa7.8□□□□□ -1.16
SDS3YIL084C TEA1P47988 759 aa7.78□□□□□ -1.16
SDS3YIL084C MSB3P48566 633 aaPredicted RBP7.78□□□□□ -1.16
SDS3YIL084C YNR021WP53723 404 aaKnown RBP7.78□□□□□ -1.16
SDS3YIL084C SYH1Q02875 849 aaKnown RBP7.77□□□□□ -1.17
SDS3YIL084C DNA2P38859 1522 aa7.77□□□□□ -1.17
SDS3YIL084C NUP42P49686 430 aaKnown RBP7.76□□□□□ -1.17
SDS3YIL084C ACO2P39533 789 aa7.75□□□□□ -1.17
SDS3YIL084C OPT2Q06593 877 aa7.75□□□□□ -1.17
SDS3YIL084C PTK2P47116 818 aaKnown RBP7.74□□□□□ -1.17
SDS3YIL084C SLY41P22215 453 aa7.73□□□□□ -1.17
SDS3YIL084C DIT2P21595 489 aa7.72□□□□□ -1.17
SDS3YIL084C FPK1P53739 893 aa7.72□□□□□ -1.17
SDS3YIL084C UGA3P26370 528 aa7.71□□□□□ -1.18
SDS3YIL084C GLC3P32775 704 aa7.7□□□□□ -1.18
SDS3YIL084C AIM7Q12156 149 aa7.69□□□□□ -1.18
SDS3YIL084C SCJ1P25303 377 aa7.68□□□□□ -1.18
SDS3YIL084C ATF2P53296 535 aa7.68□□□□□ -1.18
SDS3YIL084C YDL206WQ12424 762 aa7.68□□□□□ -1.18
SDS3YIL084C KIP2P28743 706 aa7.67□□□□□ -1.18
SDS3YIL084C RPA14P50106 137 aa7.66□□□□□ -1.18
SDS3YIL084C KIN1P13185 1064 aa7.65□□□□□ -1.18
SDS3YIL084C MRT4P33201 236 aaKnown RBP7.65□□□□□ -1.18
SDS3YIL084C IXR1P33417 597 aa7.65□□□□□ -1.18
SDS3YIL084C YIR007WP40566 764 aa7.65□□□□□ -1.18
SDS3YIL084C YPR097WQ06839 1073 aa7.65□□□□□ -1.18
SDS3YIL084C ALR1Q08269 859 aa7.65□□□□□ -1.18
SDS3YIL084C SRF1Q12516 437 aa7.65□□□□□ -1.18
SDS3YIL084C SWR1Q05471 1514 aa7.64□□□□□ -1.19
SDS3YIL084C PUS6P53294 404 aa7.63□□□□□ -1.19
SDS3YIL084C YMR196WQ04336 1088 aa7.63□□□□□ -1.19
SDS3YIL084C TRM1P15565 570 aaKnown RBP7.62□□□□□ -1.19
SDS3YIL084C TRK2P28584 889 aa7.62□□□□□ -1.19
SDS3YIL084C GLY1P37303 387 aaKnown RBP7.62□□□□□ -1.19
SDS3YIL084C TAF7Q05021 590 aa7.62□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms