RNA–Protein interactions for RNA: YIL021W

RPB3, Transcript of RNA polymerase II third largest subunit B44, yeastyeast

Gene RPB3, Length 957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB3YIL021W TY1A-ER2P0CX66 440 aa6.13□□□□□ -1.43
RPB3YIL021W TY1A-GR3P0CX67 440 aa6.13□□□□□ -1.43
RPB3YIL021W TY1A-LR1P0CX68 440 aa6.13□□□□□ -1.43
RPB3YIL021W TY1A-MR2P0CX69 440 aa6.13□□□□□ -1.43
RPB3YIL021W PSE1P32337 1089 aaKnown RBP6.13□□□□□ -1.43
RPB3YIL021W TY1A-JR2P47099 440 aa6.13□□□□□ -1.43
RPB3YIL021W NUP42P49686 430 aaKnown RBP6.13□□□□□ -1.43
RPB3YIL021W SRC1Q03707 834 aa6.13□□□□□ -1.43
RPB3YIL021W TY1A-DR1Q03856 440 aa6.13□□□□□ -1.43
RPB3YIL021W TY1A-ML1Q04706 440 aaKnown RBP6.13□□□□□ -1.43
RPB3YIL021W TY1A-BRQ12217 440 aa6.13□□□□□ -1.43
RPB3YIL021W TY1A-NL2Q12470 440 aa6.13□□□□□ -1.43
RPB3YIL021W TY1A-GR2Q12485 440 aa6.13□□□□□ -1.43
RPB3YIL021W SEC2P17065 759 aa6.12□□□□□ -1.43
RPB3YIL021W IES2P40154 320 aa6.12□□□□□ -1.43
RPB3YIL021W AMS1P22855 1083 aa6.1□□□□□ -1.43
RPB3YIL021W DIT2P21595 489 aa6.09□□□□□ -1.43
RPB3YIL021W SPB4P25808 606 aaPredicted RBP6.09□□□□□ -1.43
RPB3YIL021W ERF2Q06551 359 aa6.08□□□□□ -1.44
RPB3YIL021W GCD11P32481 527 aaKnown RBP6.07□□□□□ -1.44
RPB3YIL021W NPL4P33755 580 aa6.07□□□□□ -1.44
RPB3YIL021W HSL1P34244 1518 aa6.04□□□□□ -1.44
RPB3YIL021W KEX2P13134 814 aa6.04□□□□□ -1.44
RPB3YIL021W CLB5P30283 435 aa6.03□□□□□ -1.44
RPB3YIL021W MRF1P30775 413 aaPredicted RBP6.03□□□□□ -1.44
RPB3YIL021W SPT6P23615 1451 aaKnown RBP6.02□□□□□ -1.44
RPB3YIL021W YEL077CQ3E7X8 1277 aa6.02□□□□□ -1.45
RPB3YIL021W SIT4P20604 311 aa6.01□□□□□ -1.45
RPB3YIL021W CST6P40535 587 aa6.01□□□□□ -1.45
RPB3YIL021W RRN7P40992 514 aa6□□□□□ -1.45
RPB3YIL021W SPT16P32558 1035 aaKnown RBP5.99□□□□□ -1.45
RPB3YIL021W TEA1P47988 759 aa5.99□□□□□ -1.45
RPB3YIL021W NIS1P53939 407 aa5.99□□□□□ -1.45
RPB3YIL021W AGE1Q04412 482 aa5.99□□□□□ -1.45
RPB3YIL021W ERG12P07277 443 aa5.98□□□□□ -1.45
RPB3YIL021W LAM6Q08001 693 aa5.98□□□□□ -1.45
RPB3YIL021W DNA2P38859 1522 aa5.98□□□□□ -1.45
RPB3YIL021W RTF1P53064 558 aa5.97□□□□□ -1.45
RPB3YIL021W PAC1P39946 494 aaKnown RBP5.96□□□□□ -1.46
RPB3YIL021W YNL115CP53925 644 aa5.96□□□□□ -1.46
RPB3YIL021W TRK1P12685 1235 aa5.95□□□□□ -1.46
RPB3YIL021W CLA4P48562 842 aa5.95□□□□□ -1.46
RPB3YIL021W TUB4P53378 473 aa5.95□□□□□ -1.46
RPB3YIL021W HIR3P47171 1648 aa5.95□□□□□ -1.46
RPB3YIL021W SWR1Q05471 1514 aa5.94□□□□□ -1.46
RPB3YIL021W MOD5P07884 428 aa5.94□□□□□ -1.46
RPB3YIL021W FPK1P53739 893 aa5.94□□□□□ -1.46
RPB3YIL021W PAT1P25644 796 aaKnown RBP5.93□□□□□ -1.46
RPB3YIL021W BDP1P46678 594 aa5.93□□□□□ -1.46
RPB3YIL021W YNR021WP53723 404 aaKnown RBP5.93□□□□□ -1.46
RPB3YIL021W AIR1P40507 360 aaKnown RBP5.92□□□□□ -1.46
RPB3YIL021W XRN1P22147 1528 aaKnown RBP5.92□□□□□ -1.46
RPB3YIL021W FRK1Q03002 865 aaPredicted RBP5.91□□□□□ -1.46
RPB3YIL021W GLC3P32775 704 aa5.9□□□□□ -1.46
RPB3YIL021W SCJ1P25303 377 aa5.88□□□□□ -1.47
RPB3YIL021W HST2P53686 357 aa5.88□□□□□ -1.47
RPB3YIL021W SLY41P22215 453 aa5.87□□□□□ -1.47
RPB3YIL021W ATF2P53296 535 aa5.87□□□□□ -1.47
RPB3YIL021W REV3P14284 1504 aa5.86□□□□□ -1.47
RPB3YIL021W YMR196WQ04336 1088 aa5.86□□□□□ -1.47
RPB3YIL021W HED1Q03937 162 aa5.85□□□□□ -1.47
RPB3YIL021W THO2P53552 1597 aaKnown RBP5.84□□□□□ -1.47
RPB3YIL021W CDC4P07834 779 aa5.84□□□□□ -1.47
RPB3YIL021W TPD3P31383 635 aa5.84□□□□□ -1.47
RPB3YIL021W SIN3P22579 1536 aa5.84□□□□□ -1.48
RPB3YIL021W PDC1P06169 563 aaKnown RBP5.83□□□□□ -1.48
RPB3YIL021W KTR1P27810 393 aaKnown RBP5.83□□□□□ -1.48
RPB3YIL021W PUS5Q06244 254 aa5.83□□□□□ -1.48
RPB3YIL021W AIM7Q12156 149 aa5.83□□□□□ -1.48
RPB3YIL021W HXT10P43581 546 aa5.82□□□□□ -1.48
RPB3YIL021W PUS6P53294 404 aa5.82□□□□□ -1.48
RPB3YIL021W MMP1Q12372 583 aa5.82□□□□□ -1.48
RPB3YIL021W TRM1P15565 570 aaKnown RBP5.81□□□□□ -1.48
RPB3YIL021W GLN1P32288 370 aaKnown RBP5.81□□□□□ -1.48
RPB3YIL021W TYW1Q08960 810 aaKnown RBP5.81□□□□□ -1.48
RPB3YIL021W MET32Q12041 191 aa5.81□□□□□ -1.48
RPB3YIL021W KOG1P38873 1557 aa5.8□□□□□ -1.48
RPB3YIL021W SSK2P53599 1579 aa5.8□□□□□ -1.48
RPB3YIL021W ESS1P22696 170 aa5.8□□□□□ -1.48
RPB3YIL021W RRD1P40454 393 aaKnown RBP5.8□□□□□ -1.48
RPB3YIL021W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
RPB3YIL021W RPA14P50106 137 aa5.8□□□□□ -1.48
RPB3YIL021W KXD1P53158 218 aa5.8□□□□□ -1.48
RPB3YIL021W LEU3P08638 886 aa5.79□□□□□ -1.48
RPB3YIL021W YJU3P28321 313 aa5.79□□□□□ -1.48
RPB3YIL021W RSC30P38781 883 aa5.79□□□□□ -1.48
RPB3YIL021W BRE2P43132 505 aa5.79□□□□□ -1.48
RPB3YIL021W YPR097WQ06839 1073 aa5.79□□□□□ -1.48
RPB3YIL021W YDL206WQ12424 762 aa5.79□□□□□ -1.48
RPB3YIL021W LEO1P38439 464 aa5.77□□□□□ -1.49
RPB3YIL021W TAF7Q05021 590 aa5.77□□□□□ -1.49
RPB3YIL021W ALR1Q08269 859 aa5.77□□□□□ -1.49
RPB3YIL021W TAF2P23255 1407 aa5.76□□□□□ -1.49
RPB3YIL021W SKI3P17883 1432 aaKnown RBP5.75□□□□□ -1.49
RPB3YIL021W ESP1Q03018 1630 aa5.75□□□□□ -1.49
RPB3YIL021W ASH1P34233 588 aa5.75□□□□□ -1.49
RPB3YIL021W TBF1Q02457 562 aa5.75□□□□□ -1.49
RPB3YIL021W RGA2Q06407 1009 aa5.75□□□□□ -1.49
RPB3YIL021W MYO2P19524 1574 aaKnown RBP5.75□□□□□ -1.49
RPB3YIL021W AFT1P22149 690 aa5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms