RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W ARO1P08566 1588 aaKnown RBP8.79□□□□□ -1
VMA16YHR026W WSC3Q12215 556 aa8.77□□□□□ -1.01
VMA16YHR026W MLP2P40457 1679 aa8.77□□□□□ -1.01
VMA16YHR026W CHC1P22137 1653 aaKnown RBP8.75□□□□□ -1.01
VMA16YHR026W YAP3P38749 330 aa8.75□□□□□ -1.01
VMA16YHR026W YBL029C-AQ3E756 94 aa8.74□□□□□ -1.01
VMA16YHR026W PTC3P34221 468 aaKnown RBP8.71□□□□□ -1.02
VMA16YHR026W MAK10Q02197 733 aa8.71□□□□□ -1.02
VMA16YHR026W UBP9P39967 754 aa8.7□□□□□ -1.02
VMA16YHR026W SET4P42948 560 aa8.68□□□□□ -1.02
VMA16YHR026W YOL036WQ08206 761 aa8.67□□□□□ -1.02
VMA16YHR026W SAM3Q08986 587 aa8.67□□□□□ -1.02
VMA16YHR026W TY3B-GQ99315 1547 aa8.66□□□□□ -1.02
VMA16YHR026W SAS10Q12136 610 aaPredicted RBP8.66□□□□□ -1.02
VMA16YHR026W BNR1P40450 1375 aa8.65□□□□□ -1.02
VMA16YHR026W VPS70P47161 811 aa8.65□□□□□ -1.02
VMA16YHR026W VNX1P42839 908 aa8.64□□□□□ -1.03
VMA16YHR026W GYP5Q12344 894 aa8.64□□□□□ -1.03
VMA16YHR026W BUD31P25337 157 aaPredicted RBP8.63□□□□□ -1.03
VMA16YHR026W GRE2Q12068 342 aaKnown RBP8.63□□□□□ -1.03
VMA16YHR026W ATH1P48016 1211 aa8.62□□□□□ -1.03
VMA16YHR026W SEC7P11075 2009 aaKnown RBP8.61□□□□□ -1.03
VMA16YHR026W DCW1P36091 449 aa8.6□□□□□ -1.03
VMA16YHR026W YPR148CQ06523 435 aa8.6□□□□□ -1.03
VMA16YHR026W NOP53Q12080 455 aaKnown RBP8.6□□□□□ -1.03
VMA16YHR026W USO1P25386 1790 aa8.58□□□□□ -1.04
VMA16YHR026W YSP2Q06681 1438 aa8.58□□□□□ -1.04
VMA16YHR026W IFH1P39520 1085 aa8.58□□□□□ -1.04
VMA16YHR026W SPP1Q03012 353 aa8.58□□□□□ -1.04
VMA16YHR026W URN1Q06525 465 aaKnown RBP8.58□□□□□ -1.04
VMA16YHR026W GUT1P32190 709 aa8.56□□□□□ -1.04
VMA16YHR026W MSB4Q12317 492 aa8.56□□□□□ -1.04
VMA16YHR026W TIF11P38912 153 aaKnown RBP8.54□□□□□ -1.04
VMA16YHR026W YMR196WQ04336 1088 aa8.54□□□□□ -1.04
VMA16YHR026W THI12P42883 340 aa8.53□□□□□ -1.04
VMA16YHR026W THI5P43534 340 aa8.53□□□□□ -1.04
VMA16YHR026W THI11P47183 340 aa8.53□□□□□ -1.04
VMA16YHR026W THI13Q07748 340 aa8.53□□□□□ -1.04
VMA16YHR026W ULI1P43604 169 aa8.52□□□□□ -1.05
VMA16YHR026W CAT8P39113 1433 aa8.52□□□□□ -1.05
VMA16YHR026W TRP5P00931 707 aaKnown RBP8.51□□□□□ -1.05
VMA16YHR026W HTA1P04911 132 aaKnown RBP8.51□□□□□ -1.05
VMA16YHR026W HTA2P04912 132 aa8.51□□□□□ -1.05
VMA16YHR026W TAF7Q05021 590 aa8.51□□□□□ -1.05
VMA16YHR026W CKB1P43639 278 aa8.5□□□□□ -1.05
VMA16YHR026W EAP1P36041 632 aaKnown RBP8.49□□□□□ -1.05
VMA16YHR026W SOL3P38858 249 aa8.49□□□□□ -1.05
VMA16YHR026W GLN1P32288 370 aaKnown RBP8.48□□□□□ -1.05
VMA16YHR026W VHR2P40041 505 aa8.46□□□□□ -1.06
VMA16YHR026W SPB4P25808 606 aaPredicted RBP8.45□□□□□ -1.06
VMA16YHR026W YGR273CP53329 174 aa8.45□□□□□ -1.06
VMA16YHR026W IOC2Q12072 812 aa8.45□□□□□ -1.06
VMA16YHR026W TY1B-NL2Q99337 1749 aaKnown RBP8.44□□□□□ -1.06
VMA16YHR026W YEL023CP39992 682 aa8.44□□□□□ -1.06
VMA16YHR026W REF2P42073 533 aaPredicted RBP8.44□□□□□ -1.06
VMA16YHR026W LDB19Q12502 818 aa8.44□□□□□ -1.06
VMA16YHR026W YBT1P32386 1661 aa8.42□□□□□ -1.06
VMA16YHR026W PBS2P08018 668 aa8.41□□□□□ -1.06
VMA16YHR026W IPL1P38991 367 aa8.41□□□□□ -1.06
VMA16YHR026W NST1P53935 1240 aa8.41□□□□□ -1.06
VMA16YHR026W GEA1P47102 1408 aaPredicted RBP8.4□□□□□ -1.06
VMA16YHR026W HAP1P0CE41 1502 aa8.39□□□□□ -1.07
VMA16YHR026W UBP14P38237 781 aaKnown RBP8.39□□□□□ -1.07
VMA16YHR026W YLR326WQ06170 240 aaKnown RBP8.39□□□□□ -1.07
VMA16YHR026W IML1P47170 1584 aa8.39□□□□□ -1.07
VMA16YHR026W ILV3P39522 585 aaKnown RBP8.38□□□□□ -1.07
VMA16YHR026W NUP188P52593 1655 aaKnown RBP8.37□□□□□ -1.07
VMA16YHR026W KEX1P09620 729 aa8.36□□□□□ -1.07
VMA16YHR026W RTG1P32607 177 aa8.36□□□□□ -1.07
VMA16YHR026W PTC4P38089 393 aa8.36□□□□□ -1.07
VMA16YHR026W SIS1P25294 352 aaKnown RBP8.35□□□□□ -1.07
VMA16YHR026W YNL035CP53962 389 aaKnown RBP8.35□□□□□ -1.07
VMA16YHR026W MPH3P0CE00 602 aa8.34□□□□□ -1.07
VMA16YHR026W JIP4Q03361 876 aa8.34□□□□□ -1.07
VMA16YHR026W VMR1P38735 1592 aa8.34□□□□□ -1.07
VMA16YHR026W TYS1P36421 394 aaKnown RBP8.33□□□□□ -1.08
VMA16YHR026W DAN4P47179 1161 aa8.33□□□□□ -1.08
VMA16YHR026W APP1P53933 587 aa8.33□□□□□ -1.08
VMA16YHR026W YDR090CQ03193 310 aa8.33□□□□□ -1.08
VMA16YHR026W AI4P03878 556 aa8.32□□□□□ -1.08
VMA16YHR026W RAD54P32863 898 aa8.31□□□□□ -1.08
VMA16YHR026W PCS60P38137 543 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
VMA16YHR026W DSF2P38213 736 aa8.31□□□□□ -1.08
VMA16YHR026W COX6P00427 148 aa8.29□□□□□ -1.08
VMA16YHR026W KIC1P38692 1080 aa8.29□□□□□ -1.08
VMA16YHR026W MAM3Q12296 706 aa8.29□□□□□ -1.08
VMA16YHR026W PML39Q03760 334 aa8.28□□□□□ -1.08
VMA16YHR026W IES2P40154 320 aa8.27□□□□□ -1.09
VMA16YHR026W FKH1P40466 484 aa8.27□□□□□ -1.09
VMA16YHR026W NCR1Q12200 1170 aa8.27□□□□□ -1.09
VMA16YHR026W LEU3P08638 886 aa8.26□□□□□ -1.09
VMA16YHR026W SEC61P32915 480 aa8.26□□□□□ -1.09
VMA16YHR026W MID1P41821 548 aa8.26□□□□□ -1.09
VMA16YHR026W MAK21Q12176 1025 aaKnown RBP8.26□□□□□ -1.09
VMA16YHR026W SLI15P38283 698 aa8.25□□□□□ -1.09
VMA16YHR026W SRB8P25648 1427 aa8.25□□□□□ -1.09
VMA16YHR026W TFG1P41895 735 aaPredicted RBP8.24□□□□□ -1.09
VMA16YHR026W YMR074CQ04773 145 aa8.24□□□□□ -1.09
VMA16YHR026W BUD21Q08492 214 aaPredicted RBP8.23□□□□□ -1.09
VMA16YHR026W AIR2Q12476 344 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms