RNA–Protein interactions for RNA: YGL135W

RPL1B, Transcript of Ribosomal 60S subunit protein L1B, yeast

Gene RPL1B, Length 654 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL1B	YGL135W	SEC2	P17065	759 aa		5.87	□□□□□ -1.47
RPL1B	YGL135W	SPT16	P32558	1035 aa	Known RBP	5.87	□□□□□ -1.47
RPL1B	YGL135W	TY1A-JR2	P47099	440 aa		5.87	□□□□□ -1.47
RPL1B	YGL135W	TY1A-DR1	Q03856	440 aa		5.87	□□□□□ -1.47
RPL1B	YGL135W	TY1A-ML1	Q04706	440 aa	Known RBP	5.87	□□□□□ -1.47
RPL1B	YGL135W	TY1A-BR	Q12217	440 aa		5.87	□□□□□ -1.47
RPL1B	YGL135W	TY1A-NL2	Q12470	440 aa		5.87	□□□□□ -1.47
RPL1B	YGL135W	TY1A-GR2	Q12485	440 aa		5.87	□□□□□ -1.47
RPL1B	YGL135W	RGR1	P19263	1082 aa		5.86	□□□□□ -1.47
RPL1B	YGL135W	CST6	P40535	587 aa		5.86	□□□□□ -1.47
RPL1B	YGL135W	YPR109W	Q06104	294 aa		5.86	□□□□□ -1.47
RPL1B	YGL135W	RGA2	Q06407	1009 aa		5.86	□□□□□ -1.47
RPL1B	YGL135W	AIR1	P40507	360 aa	Known RBP	5.84	□□□□□ -1.47
RPL1B	YGL135W	CLA4	P48562	842 aa		5.83	□□□□□ -1.48
RPL1B	YGL135W	RRN7	P40992	514 aa		5.82	□□□□□ -1.48
RPL1B	YGL135W	LAM6	Q08001	693 aa		5.82	□□□□□ -1.48
RPL1B	YGL135W	FRK1	Q03002	865 aa	Predicted RBP	5.81	□□□□□ -1.48
RPL1B	YGL135W	PAT1	P25644	796 aa	Known RBP	5.8	□□□□□ -1.48
RPL1B	YGL135W	BRE2	P43132	505 aa		5.79	□□□□□ -1.48
RPL1B	YGL135W	PBS2	P08018	668 aa		5.78	□□□□□ -1.48
RPL1B	YGL135W	KEX2	P13134	814 aa		5.78	□□□□□ -1.48
RPL1B	YGL135W	BDP1	P46678	594 aa		5.78	□□□□□ -1.48
RPL1B	YGL135W	GCR2	Q01722	534 aa		5.78	□□□□□ -1.48
RPL1B	YGL135W	CKB1	P43639	278 aa		5.77	□□□□□ -1.49
RPL1B	YGL135W	ERF2	Q06551	359 aa		5.77	□□□□□ -1.49
RPL1B	YGL135W	CDC4	P07834	779 aa		5.75	□□□□□ -1.49
RPL1B	YGL135W	PSE1	P32337	1089 aa	Known RBP	5.75	□□□□□ -1.49
RPL1B	YGL135W	LEO1	P38439	464 aa		5.74	□□□□□ -1.49
RPL1B	YGL135W	GAR1	P28007	205 aa	Known RBP	5.73	□□□□□ -1.49
RPL1B	YGL135W	YPL062W	Q02781	134 aa		5.73	□□□□□ -1.49
RPL1B	YGL135W	HED1	Q03937	162 aa		5.72	□□□□□ -1.49
RPL1B	YGL135W	PAC1	P39946	494 aa	Known RBP	5.71	□□□□□ -1.5
RPL1B	YGL135W	MAM3	Q12296	706 aa		5.71	□□□□□ -1.5
RPL1B	YGL135W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
RPL1B	YGL135W	CLB5	P30283	435 aa		5.7	□□□□□ -1.5
RPL1B	YGL135W	MOD5	P07884	428 aa		5.68	□□□□□ -1.5
RPL1B	YGL135W	TUB4	P53378	473 aa		5.68	□□□□□ -1.5
RPL1B	YGL135W	AGE1	Q04412	482 aa		5.68	□□□□□ -1.5
RPL1B	YGL135W	IES2	P40154	320 aa		5.67	□□□□□ -1.5
RPL1B	YGL135W	RTF1	P53064	558 aa		5.66	□□□□□ -1.5
RPL1B	YGL135W	MET22	P32179	357 aa		5.65	□□□□□ -1.5
RPL1B	YGL135W	DSF2	P38213	736 aa		5.65	□□□□□ -1.5
RPL1B	YGL135W	YNL115C	P53925	644 aa		5.65	□□□□□ -1.5
RPL1B	YGL135W	PUS5	Q06244	254 aa		5.65	□□□□□ -1.5
RPL1B	YGL135W	ASH1	P34233	588 aa		5.64	□□□□□ -1.51
RPL1B	YGL135W	MET32	Q12041	191 aa		5.64	□□□□□ -1.51
RPL1B	YGL135W	TEA1	P47988	759 aa		5.63	□□□□□ -1.51
RPL1B	YGL135W	SIT4	P20604	311 aa		5.62	□□□□□ -1.51
RPL1B	YGL135W	NUP42	P49686	430 aa	Known RBP	5.62	□□□□□ -1.51
RPL1B	YGL135W	HST3	P53687	447 aa		5.62	□□□□□ -1.51
RPL1B	YGL135W	ENV9	Q08651	330 aa		5.62	□□□□□ -1.51
RPL1B	YGL135W	SAS10	Q12136	610 aa	Predicted RBP	5.62	□□□□□ -1.51
RPL1B	YGL135W	NIS1	P53939	407 aa		5.61	□□□□□ -1.51
RPL1B	YGL135W	AFT1	P22149	690 aa		5.6	□□□□□ -1.51
RPL1B	YGL135W	YDR444W	Q04093	687 aa		5.6	□□□□□ -1.51
RPL1B	YGL135W	SPB4	P25808	606 aa	Predicted RBP	5.59	□□□□□ -1.51
RPL1B	YGL135W	KXD1	P53158	218 aa		5.59	□□□□□ -1.51
RPL1B	YGL135W	DIT2	P21595	489 aa		5.58	□□□□□ -1.52
RPL1B	YGL135W	SLY41	P22215	453 aa		5.56	□□□□□ -1.52
RPL1B	YGL135W	TPD3	P31383	635 aa		5.55	□□□□□ -1.52
RPL1B	YGL135W	HXT10	P43581	546 aa		5.55	□□□□□ -1.52
RPL1B	YGL135W	YJR115W	P47152	169 aa		5.55	□□□□□ -1.52
RPL1B	YGL135W	FPK1	P53739	893 aa		5.55	□□□□□ -1.52
RPL1B	YGL135W	LCB5	Q06147	687 aa	Known RBP	5.55	□□□□□ -1.52
RPL1B	YGL135W	PDC1	P06169	563 aa	Known RBP	5.54	□□□□□ -1.52
RPL1B	YGL135W	RRD1	P40454	393 aa	Known RBP	5.54	□□□□□ -1.52
RPL1B	YGL135W	SYH1	Q02875	849 aa	Known RBP	5.54	□□□□□ -1.52
RPL1B	YGL135W	YMR196W	Q04336	1088 aa		5.54	□□□□□ -1.52
RPL1B	YGL135W	MSB3	P48566	633 aa	Predicted RBP	5.5	□□□□□ -1.53
RPL1B	YGL135W	PUS6	P53294	404 aa		5.5	□□□□□ -1.53
RPL1B	YGL135W	TBF1	Q02457	562 aa		5.5	□□□□□ -1.53
RPL1B	YGL135W	YDL176W	Q12027	708 aa		5.5	□□□□□ -1.53
RPL1B	YGL135W	SCJ1	P25303	377 aa		5.49	□□□□□ -1.53
RPL1B	YGL135W	RPA14	P50106	137 aa		5.49	□□□□□ -1.53
RPL1B	YGL135W	ALR1	Q08269	859 aa		5.49	□□□□□ -1.53
RPL1B	YGL135W	YDL206W	Q12424	762 aa		5.49	□□□□□ -1.53
RPL1B	YGL135W	UGA3	P26370	528 aa		5.48	□□□□□ -1.53
RPL1B	YGL135W	KIP2	P28743	706 aa		5.48	□□□□□ -1.53
RPL1B	YGL135W	YPR097W	Q06839	1073 aa		5.48	□□□□□ -1.53
RPL1B	YGL135W	TRM1	P15565	570 aa	Known RBP	5.46	□□□□□ -1.54
RPL1B	YGL135W	IXR1	P33417	597 aa		5.46	□□□□□ -1.54
RPL1B	YGL135W	HST2	P53686	357 aa		5.46	□□□□□ -1.54
RPL1B	YGL135W	MMP1	Q12372	583 aa		5.45	□□□□□ -1.54
RPL1B	YGL135W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.44	□□□□□ -1.54	not detected
RPL1B	YGL135W	PTK2	P47116	818 aa	Known RBP	5.44	□□□□□ -1.54
RPL1B	YGL135W	ATF2	P53296	535 aa		5.44	□□□□□ -1.54
RPL1B	YGL135W	SRF1	Q12516	437 aa		5.44	□□□□□ -1.54
RPL1B	YGL135W	GLN1	P32288	370 aa	Known RBP	5.42	□□□□□ -1.54
RPL1B	YGL135W	CAF120	P53836	1060 aa		5.42	□□□□□ -1.54
RPL1B	YGL135W	OPT2	Q06593	877 aa		5.42	□□□□□ -1.54
RPL1B	YGL135W	ESS1	P22696	170 aa		5.41	□□□□□ -1.54
RPL1B	YGL135W	MRT4	P33201	236 aa	Known RBP	5.41	□□□□□ -1.54
RPL1B	YGL135W	YLR346C	Q06139	101 aa		5.41	□□□□□ -1.54
RPL1B	YGL135W	LEU3	P08638	886 aa		5.39	□□□□□ -1.55
RPL1B	YGL135W	ACO2	P39533	789 aa		5.39	□□□□□ -1.55
RPL1B	YGL135W	YJU3	P28321	313 aa		5.38	□□□□□ -1.55
RPL1B	YGL135W	NUP85	P46673	744 aa		5.38	□□□□□ -1.55
RPL1B	YGL135W	TYW1	Q08960	810 aa	Known RBP	5.38	□□□□□ -1.55
RPL1B	YGL135W	GLC3	P32775	704 aa		5.37	□□□□□ -1.55
RPL1B	YGL135W	VAC17	P25591	423 aa		5.36	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms