RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C PKH3Q03306 898 aaPredicted RBP8.49□□□□□ -1.05
SCL1YGL011C YJU3P28321 313 aa8.48□□□□□ -1.05
SCL1YGL011C YJL171CP46992 396 aa8.48□□□□□ -1.05
SCL1YGL011C ELP4Q02884 456 aaKnown RBP8.48□□□□□ -1.05
SCL1YGL011C KEX2P13134 814 aa8.47□□□□□ -1.05
SCL1YGL011C ERF2Q06551 359 aa8.46□□□□□ -1.06
SCL1YGL011C SLY41P22215 453 aa8.45□□□□□ -1.06
SCL1YGL011C STR2P47164 639 aa8.45□□□□□ -1.06
SCL1YGL011C ISM1P48526 1002 aa8.45□□□□□ -1.06
SCL1YGL011C BNI4P53858 892 aa8.45□□□□□ -1.06
SCL1YGL011C YNL115CP53925 644 aa8.45□□□□□ -1.06
SCL1YGL011C RAD59Q12223 238 aa8.45□□□□□ -1.06
SCL1YGL011C BMT6Q12291 365 aa8.45□□□□□ -1.06
SCL1YGL011C RTF1P53064 558 aa8.44□□□□□ -1.06
SCL1YGL011C RAM1P22007 431 aa8.43□□□□□ -1.06
SCL1YGL011C NPL4P33755 580 aa8.42□□□□□ -1.06
SCL1YGL011C SPT23P35210 1082 aa8.41□□□□□ -1.06
SCL1YGL011C YBL036CP38197 257 aa8.41□□□□□ -1.06
SCL1YGL011C YJL007CP47080 104 aa8.41□□□□□ -1.06
SCL1YGL011C ARG8P18544 423 aa8.4□□□□□ -1.06
SCL1YGL011C YPR015CQ12531 247 aa8.4□□□□□ -1.06
SCL1YGL011C TY1A-DR4O74302 440 aa8.39□□□□□ -1.07
SCL1YGL011C TY1A-HP0C2I4 478 aaKnown RBP8.39□□□□□ -1.07
SCL1YGL011C TY1A-AP0CX57 440 aa8.39□□□□□ -1.07
SCL1YGL011C TY1A-PR1P0CX58 440 aa8.39□□□□□ -1.07
SCL1YGL011C TY1A-ORP0CX59 440 aa8.39□□□□□ -1.07
SCL1YGL011C TY1A-PR2P0CX60 440 aa8.39□□□□□ -1.07
SCL1YGL011C TY1A-DR5P0CX65 440 aa8.39□□□□□ -1.07
SCL1YGL011C TY1A-ER2P0CX66 440 aa8.39□□□□□ -1.07
SCL1YGL011C TY1A-GR3P0CX67 440 aa8.39□□□□□ -1.07
SCL1YGL011C TY1A-LR1P0CX68 440 aa8.39□□□□□ -1.07
SCL1YGL011C TY1A-MR2P0CX69 440 aa8.39□□□□□ -1.07
SCL1YGL011C PRE3P38624 215 aa8.39□□□□□ -1.07
SCL1YGL011C BIM1P40013 344 aa8.39□□□□□ -1.07
SCL1YGL011C TY1A-JR2P47099 440 aa8.39□□□□□ -1.07
SCL1YGL011C TY1A-DR1Q03856 440 aa8.39□□□□□ -1.07
SCL1YGL011C TY1A-ML1Q04706 440 aaKnown RBP8.39□□□□□ -1.07
SCL1YGL011C TY1A-BRQ12217 440 aa8.39□□□□□ -1.07
SCL1YGL011C TY1A-NL2Q12470 440 aa8.39□□□□□ -1.07
SCL1YGL011C TY1A-GR2Q12485 440 aa8.39□□□□□ -1.07
SCL1YGL011C TRM1P15565 570 aaKnown RBP8.38□□□□□ -1.07
SCL1YGL011C BIO2P32451 375 aa8.38□□□□□ -1.07
SCL1YGL011C PTC2P39966 464 aaKnown RBP8.38□□□□□ -1.07
SCL1YGL011C ATG32P40458 529 aa8.38□□□□□ -1.07
SCL1YGL011C RSC30P38781 883 aa8.37□□□□□ -1.07
SCL1YGL011C BUD20Q08004 166 aaPredicted RBP8.37□□□□□ -1.07
SCL1YGL011C GCD11P32481 527 aaKnown RBP8.36□□□□□ -1.07
SCL1YGL011C LAM6Q08001 693 aa8.36□□□□□ -1.07
SCL1YGL011C SEC2P17065 759 aa8.35□□□□□ -1.07
SCL1YGL011C AGE1Q04412 482 aa8.33□□□□□ -1.08
SCL1YGL011C CHL1P22516 861 aaPredicted RBP8.32□□□□□ -1.08
SCL1YGL011C PUS6P53294 404 aa8.32□□□□□ -1.08
SCL1YGL011C YML082WQ04533 649 aaKnown RBP8.32□□□□□ -1.08
SCL1YGL011C CSE4P36012 229 aa8.31□□□□□ -1.08
SCL1YGL011C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
SCL1YGL011C TUB4P53378 473 aa8.31□□□□□ -1.08
SCL1YGL011C TBF1Q02457 562 aa8.3□□□□□ -1.08
SCL1YGL011C PRT1P06103 763 aaKnown RBP8.29□□□□□ -1.08
SCL1YGL011C ERG12P07277 443 aa8.29□□□□□ -1.08
SCL1YGL011C TIF1P10081 395 aaKnown RBP8.29□□□□□ -1.08
SCL1YGL011C MAK16P10962 306 aaPredicted RBP8.29□□□□□ -1.08
SCL1YGL011C RPL34BP40525 121 aaKnown RBP8.29□□□□□ -1.08
SCL1YGL011C YNL108CP53929 270 aa8.29□□□□□ -1.08
SCL1YGL011C YDL206WQ12424 762 aa8.28□□□□□ -1.08
SCL1YGL011C PAC1P39946 494 aaKnown RBP8.26□□□□□ -1.09
SCL1YGL011C YDJ1P25491 409 aaKnown RBP8.25□□□□□ -1.09
SCL1YGL011C RRN7P40992 514 aa8.25□□□□□ -1.09
SCL1YGL011C YPR204WQ08995 1032 aa8.24□□□□□ -1.09
SCL1YGL011C SUP45P12385 437 aaKnown RBP8.23□□□□□ -1.09
SCL1YGL011C SPT5P27692 1063 aaKnown RBP8.23□□□□□ -1.09
SCL1YGL011C ENO2P00925 437 aaKnown RBP8.22□□□□□ -1.09
SCL1YGL011C RTG2P32608 588 aaKnown RBP8.22□□□□□ -1.09
SCL1YGL011C RPA14P50106 137 aa8.22□□□□□ -1.09
SCL1YGL011C PDC1P06169 563 aaKnown RBP8.2□□□□□ -1.1
SCL1YGL011C GYP1Q08484 637 aa8.2□□□□□ -1.1
SCL1YGL011C PAT1P25644 796 aaKnown RBP8.18□□□□□ -1.1
SCL1YGL011C SPT16P32558 1035 aaKnown RBP8.18□□□□□ -1.1
SCL1YGL011C NAF1P53919 492 aaKnown RBP8.18□□□□□ -1.1
SCL1YGL011C YPR097WQ06839 1073 aa8.18□□□□□ -1.1
SCL1YGL011C ALR1Q08269 859 aa8.18□□□□□ -1.1
SCL1YGL011C ENO1P00924 437 aaKnown RBP8.16□□□□□ -1.1
SCL1YGL011C RIM21P48565 533 aa8.16□□□□□ -1.1
SCL1YGL011C VRP1P37370 817 aa8.15□□□□□ -1.1
SCL1YGL011C KXD1P53158 218 aa8.15□□□□□ -1.1
SCL1YGL011C MCM16Q12262 181 aa8.15□□□□□ -1.1
SCL1YGL011C CPS1P27614 576 aa8.14□□□□□ -1.11
SCL1YGL011C TTI1P36097 1038 aa8.14□□□□□ -1.11
SCL1YGL011C SAS4Q04003 481 aa8.14□□□□□ -1.11
SCL1YGL011C MRX10Q05648 414 aa8.13□□□□□ -1.11
SCL1YGL011C RGA2Q06407 1009 aa8.13□□□□□ -1.11
SCL1YGL011C SUB2Q07478 446 aaKnown RBP8.13□□□□□ -1.11
SCL1YGL011C ISF1P32488 338 aa8.12□□□□□ -1.11
SCL1YGL011C FIG4P42837 879 aa8.12□□□□□ -1.11
SCL1YGL011C HXT10P43581 546 aa8.12□□□□□ -1.11
SCL1YGL011C TEC1P18412 486 aa8.11□□□□□ -1.11
SCL1YGL011C RRD1P40454 393 aaKnown RBP8.11□□□□□ -1.11
SCL1YGL011C MOD5P07884 428 aa8.1□□□□□ -1.11
SCL1YGL011C SDH2P21801 266 aa8.1□□□□□ -1.11
SCL1YGL011C SSA4P22202 642 aaKnown RBP8.1□□□□□ -1.11
SCL1YGL011C TPD3P31383 635 aa8.09□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms