RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W TY1A-DR1Q03856 440 aa5.39□□□□□ -1.55
NIC96YFR002W TY1A-ML1Q04706 440 aaKnown RBP5.39□□□□□ -1.55
NIC96YFR002W TY1A-BRQ12217 440 aa5.39□□□□□ -1.55
NIC96YFR002W TY1A-NL2Q12470 440 aa5.39□□□□□ -1.55
NIC96YFR002W TY1A-GR2Q12485 440 aa5.39□□□□□ -1.55
NIC96YFR002W TEA1P47988 759 aa5.39□□□□□ -1.55
NIC96YFR002W SEC2P17065 759 aa5.38□□□□□ -1.55
NIC96YFR002W GLC3P32775 704 aa5.38□□□□□ -1.55
NIC96YFR002W GYP1Q08484 637 aa5.38□□□□□ -1.55
NIC96YFR002W PRT1P06103 763 aaKnown RBP5.38□□□□□ -1.55
NIC96YFR002W NPL4P33755 580 aa5.37□□□□□ -1.55
NIC96YFR002W SDH2P21801 266 aa5.37□□□□□ -1.55
NIC96YFR002W ERF2Q06551 359 aa5.37□□□□□ -1.55
NIC96YFR002W NIS1P53939 407 aa5.36□□□□□ -1.55
NIC96YFR002W SAS4Q04003 481 aa5.36□□□□□ -1.55
NIC96YFR002W KEX2P13134 814 aa5.36□□□□□ -1.55
NIC96YFR002W GCD11P32481 527 aaKnown RBP5.35□□□□□ -1.55
NIC96YFR002W SIT4P20604 311 aa5.35□□□□□ -1.55
NIC96YFR002W ATF2P53296 535 aa5.34□□□□□ -1.55
NIC96YFR002W AIM7Q12156 149 aa5.33□□□□□ -1.56
NIC96YFR002W DPS1P04802 557 aaKnown RBP5.33□□□□□ -1.56
NIC96YFR002W RTF1P53064 558 aa5.32□□□□□ -1.56
NIC96YFR002W FPK1P53739 893 aa5.32□□□□□ -1.56
NIC96YFR002W YNL115CP53925 644 aa5.31□□□□□ -1.56
NIC96YFR002W AGE1Q04412 482 aa5.3□□□□□ -1.56
NIC96YFR002W RAS1P01119 309 aa5.3□□□□□ -1.56
NIC96YFR002W RRN7P40992 514 aa5.29□□□□□ -1.56
NIC96YFR002W MRF1P30775 413 aaPredicted RBP5.28□□□□□ -1.56
NIC96YFR002W HST2P53686 357 aa5.28□□□□□ -1.56
NIC96YFR002W YMR196WQ04336 1088 aa5.28□□□□□ -1.56
NIC96YFR002W AMS1P22855 1083 aa5.28□□□□□ -1.56
NIC96YFR002W PAC1P39946 494 aaKnown RBP5.28□□□□□ -1.56
NIC96YFR002W SPT16P32558 1035 aaKnown RBP5.27□□□□□ -1.57
NIC96YFR002W RPN1P38764 993 aaKnown RBP5.27□□□□□ -1.57
NIC96YFR002W TUB4P53378 473 aa5.27□□□□□ -1.57
NIC96YFR002W SCJ1P25303 377 aa5.27□□□□□ -1.57
NIC96YFR002W KIN1P13185 1064 aa5.26□□□□□ -1.57
NIC96YFR002W SLY41P22215 453 aa5.25□□□□□ -1.57
NIC96YFR002W KTR1P27810 393 aaKnown RBP5.25□□□□□ -1.57
NIC96YFR002W CST6P40535 587 aa5.25□□□□□ -1.57
NIC96YFR002W YEL077CQ3E7X8 1277 aa5.25□□□□□ -1.57
NIC96YFR002W ERG12P07277 443 aa5.25□□□□□ -1.57
NIC96YFR002W PAT1P25644 796 aaKnown RBP5.24□□□□□ -1.57
NIC96YFR002W SRC1Q03707 834 aa5.24□□□□□ -1.57
NIC96YFR002W TYW1Q08960 810 aaKnown RBP5.24□□□□□ -1.57
NIC96YFR002W MMP1Q12372 583 aa5.24□□□□□ -1.57
NIC96YFR002W GLN1P32288 370 aaKnown RBP5.23□□□□□ -1.57
NIC96YFR002W MOD5P07884 428 aa5.23□□□□□ -1.57
NIC96YFR002W LAM6Q08001 693 aa5.23□□□□□ -1.57
NIC96YFR002W ESS1P22696 170 aa5.22□□□□□ -1.57
NIC96YFR002W CSN12P47130 423 aa5.21□□□□□ -1.58
NIC96YFR002W YJU3P28321 313 aa5.21□□□□□ -1.58
NIC96YFR002W BDP1P46678 594 aa5.21□□□□□ -1.58
NIC96YFR002W TRM1P15565 570 aaKnown RBP5.2□□□□□ -1.58
NIC96YFR002W PUS6P53294 404 aa5.19□□□□□ -1.58
NIC96YFR002W FRK1Q03002 865 aaPredicted RBP5.19□□□□□ -1.58
NIC96YFR002W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
NIC96YFR002W CLA4P48562 842 aa5.18□□□□□ -1.58
NIC96YFR002W PDC1P06169 563 aaKnown RBP5.18□□□□□ -1.58
NIC96YFR002W RSC30P38781 883 aa5.18□□□□□ -1.58
NIC96YFR002W YDL206WQ12424 762 aa5.18□□□□□ -1.58
NIC96YFR002W GUA1P38625 525 aaKnown RBP5.17□□□□□ -1.58
NIC96YFR002W PKH3Q03306 898 aaPredicted RBP5.17□□□□□ -1.58
NIC96YFR002W TPD3P31383 635 aa5.17□□□□□ -1.58
NIC96YFR002W RPA14P50106 137 aa5.16□□□□□ -1.58
NIC96YFR002W KXD1P53158 218 aa5.16□□□□□ -1.58
NIC96YFR002W TBF1Q02457 562 aa5.16□□□□□ -1.58
NIC96YFR002W HXT10P43581 546 aa5.16□□□□□ -1.58
NIC96YFR002W AIR1P40507 360 aaKnown RBP5.15□□□□□ -1.58
NIC96YFR002W YPR097WQ06839 1073 aa5.15□□□□□ -1.58
NIC96YFR002W RRD1P40454 393 aaKnown RBP5.15□□□□□ -1.59
NIC96YFR002W SSA2P10592 639 aaKnown RBP5.14□□□□□ -1.59
NIC96YFR002W PUS5Q06244 254 aa5.14□□□□□ -1.59
NIC96YFR002W ALR1Q08269 859 aa5.14□□□□□ -1.59
NIC96YFR002W RAD59Q12223 238 aa5.13□□□□□ -1.59
NIC96YFR002W TRK1P12685 1235 aa5.13□□□□□ -1.59
NIC96YFR002W ARG8P18544 423 aa5.13□□□□□ -1.59
NIC96YFR002W HED1Q03937 162 aa5.12□□□□□ -1.59
NIC96YFR002W LEO1P38439 464 aa5.11□□□□□ -1.59
NIC96YFR002W HPC2Q01448 625 aa5.1□□□□□ -1.59
NIC96YFR002W CDC4P07834 779 aa5.09□□□□□ -1.59
NIC96YFR002W MET32Q12041 191 aa5.08□□□□□ -1.6
NIC96YFR002W SYH1Q02875 849 aaKnown RBP5.06□□□□□ -1.6
NIC96YFR002W TFB3Q03290 321 aa5.06□□□□□ -1.6
NIC96YFR002W VAC17P25591 423 aa5.06□□□□□ -1.6
NIC96YFR002W MAK16P10962 306 aaPredicted RBP5.05□□□□□ -1.6
NIC96YFR002W PKC1P24583 1151 aa5.04□□□□□ -1.6
NIC96YFR002W KIP2P28743 706 aa5.04□□□□□ -1.6
NIC96YFR002W FIG4P42837 879 aa5.04□□□□□ -1.6
NIC96YFR002W IXR1P33417 597 aa5.03□□□□□ -1.6
NIC96YFR002W BRL1P38770 471 aa5.03□□□□□ -1.6
NIC96YFR002W AFT1P22149 690 aa5.02□□□□□ -1.61
NIC96YFR002W ASH1P34233 588 aa5.02□□□□□ -1.61
NIC96YFR002W ITT1Q04638 464 aa5.02□□□□□ -1.61
NIC96YFR002W MRT4P33201 236 aaKnown RBP5.01□□□□□ -1.61
NIC96YFR002W BRE2P43132 505 aa5.01□□□□□ -1.61
NIC96YFR002W YPR084WQ06821 456 aa5.01□□□□□ -1.61
NIC96YFR002W CSE4P36012 229 aa5.01□□□□□ -1.61
NIC96YFR002W YBL036CP38197 257 aa5□□□□□ -1.61
NIC96YFR002W TEC1P18412 486 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms