RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W SEC2P17065 759 aa8.05□□□□□ -1.12
LSM4YER112W SPT16P32558 1035 aaKnown RBP8.05□□□□□ -1.12
LSM4YER112W TY1A-JR2P47099 440 aa8.05□□□□□ -1.12
LSM4YER112W TY1A-DR1Q03856 440 aa8.05□□□□□ -1.12
LSM4YER112W TY1A-ML1Q04706 440 aaKnown RBP8.05□□□□□ -1.12
LSM4YER112W TY1A-BRQ12217 440 aa8.05□□□□□ -1.12
LSM4YER112W TY1A-NL2Q12470 440 aa8.05□□□□□ -1.12
LSM4YER112W TY1A-GR2Q12485 440 aa8.05□□□□□ -1.12
LSM4YER112W RGR1P19263 1082 aa8.04□□□□□ -1.12
LSM4YER112W YPR109WQ06104 294 aa8.03□□□□□ -1.12
LSM4YER112W CST6P40535 587 aa8.02□□□□□ -1.13
LSM4YER112W PAT1P25644 796 aaKnown RBP8□□□□□ -1.13
LSM4YER112W CKB1P43639 278 aa8□□□□□ -1.13
LSM4YER112W LAM6Q08001 693 aa8□□□□□ -1.13
LSM4YER112W AIR1P40507 360 aaKnown RBP7.97□□□□□ -1.13
LSM4YER112W BRE2P43132 505 aa7.97□□□□□ -1.13
LSM4YER112W GCR2Q01722 534 aa7.97□□□□□ -1.13
LSM4YER112W RRN7P40992 514 aa7.96□□□□□ -1.14
LSM4YER112W PBS2P08018 668 aa7.94□□□□□ -1.14
LSM4YER112W PSE1P32337 1089 aaKnown RBP7.94□□□□□ -1.14
LSM4YER112W CLA4P48562 842 aa7.94□□□□□ -1.14
LSM4YER112W FRK1Q03002 865 aaPredicted RBP7.93□□□□□ -1.14
LSM4YER112W CDC4P07834 779 aa7.92□□□□□ -1.14
LSM4YER112W BDP1P46678 594 aa7.92□□□□□ -1.14
LSM4YER112W CLB5P30283 435 aa7.91□□□□□ -1.14
LSM4YER112W KEX2P13134 814 aa7.9□□□□□ -1.14
LSM4YER112W HED1Q03937 162 aa7.9□□□□□ -1.14
LSM4YER112W YPL062WQ02781 134 aa7.89□□□□□ -1.15
LSM4YER112W ERF2Q06551 359 aa7.87□□□□□ -1.15
LSM4YER112W MAM3Q12296 706 aa7.86□□□□□ -1.15
LSM4YER112W RTF1P53064 558 aa7.84□□□□□ -1.15
LSM4YER112W MOD5P07884 428 aa7.82□□□□□ -1.16
LSM4YER112W DSF2P38213 736 aa7.82□□□□□ -1.16
LSM4YER112W GAR1P28007 205 aaKnown RBP7.81□□□□□ -1.16
LSM4YER112W PAC1P39946 494 aaKnown RBP7.81□□□□□ -1.16
LSM4YER112W TUB4P53378 473 aa7.8□□□□□ -1.16
LSM4YER112W AGE1Q04412 482 aa7.8□□□□□ -1.16
LSM4YER112W GBP2P25555 427 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
LSM4YER112W SAS10Q12136 610 aaPredicted RBP7.79□□□□□ -1.16
LSM4YER112W YNL115CP53925 644 aa7.78□□□□□ -1.16
LSM4YER112W IES2P40154 320 aa7.77□□□□□ -1.17
LSM4YER112W SIT4P20604 311 aa7.76□□□□□ -1.17
LSM4YER112W MET22P32179 357 aa7.76□□□□□ -1.17
LSM4YER112W TEA1P47988 759 aa7.76□□□□□ -1.17
LSM4YER112W ENV9Q08651 330 aa7.76□□□□□ -1.17
LSM4YER112W AFT1P22149 690 aa7.74□□□□□ -1.17
LSM4YER112W ASH1P34233 588 aa7.73□□□□□ -1.17
LSM4YER112W NUP42P49686 430 aaKnown RBP7.73□□□□□ -1.17
LSM4YER112W MET32Q12041 191 aa7.73□□□□□ -1.17
LSM4YER112W HST3P53687 447 aa7.72□□□□□ -1.17
LSM4YER112W TPD3P31383 635 aa7.71□□□□□ -1.18
LSM4YER112W KXD1P53158 218 aa7.71□□□□□ -1.18
LSM4YER112W YDR444WQ04093 687 aa7.7□□□□□ -1.18
LSM4YER112W PUS5Q06244 254 aa7.7□□□□□ -1.18
LSM4YER112W NIS1P53939 407 aa7.69□□□□□ -1.18
LSM4YER112W SPB4P25808 606 aaPredicted RBP7.66□□□□□ -1.18
LSM4YER112W HXT10P43581 546 aa7.66□□□□□ -1.18
LSM4YER112W LCB5Q06147 687 aaKnown RBP7.66□□□□□ -1.18
LSM4YER112W RRD1P40454 393 aaKnown RBP7.65□□□□□ -1.18
LSM4YER112W DIT2P21595 489 aa7.64□□□□□ -1.19
LSM4YER112W SYH1Q02875 849 aaKnown RBP7.63□□□□□ -1.19
LSM4YER112W SLY41P22215 453 aa7.62□□□□□ -1.19
LSM4YER112W FPK1P53739 893 aa7.62□□□□□ -1.19
LSM4YER112W PDC1P06169 563 aaKnown RBP7.61□□□□□ -1.19
LSM4YER112W YJR115WP47152 169 aa7.61□□□□□ -1.19
LSM4YER112W MSB3P48566 633 aaPredicted RBP7.61□□□□□ -1.19
LSM4YER112W YMR196WQ04336 1088 aa7.61□□□□□ -1.19
LSM4YER112W RPA14P50106 137 aa7.58□□□□□ -1.2
LSM4YER112W ALR1Q08269 859 aa7.58□□□□□ -1.2
LSM4YER112W YDL176WQ12027 708 aa7.58□□□□□ -1.2
LSM4YER112W PUS6P53294 404 aa7.57□□□□□ -1.2
LSM4YER112W TBF1Q02457 562 aa7.56□□□□□ -1.2
LSM4YER112W YPR097WQ06839 1073 aa7.56□□□□□ -1.2
LSM4YER112W HST2P53686 357 aa7.55□□□□□ -1.2
LSM4YER112W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
LSM4YER112W YDL206WQ12424 762 aa7.54□□□□□ -1.2
LSM4YER112W UGA3P26370 528 aa7.52□□□□□ -1.21
LSM4YER112W KIP2P28743 706 aa7.52□□□□□ -1.21
LSM4YER112W RTT106P40161 455 aa7.51□□□□□ -1.21
LSM4YER112W LEU3P08638 886 aa7.49□□□□□ -1.21
LSM4YER112W TRM1P15565 570 aaKnown RBP7.49□□□□□ -1.21
LSM4YER112W MRT4P33201 236 aaKnown RBP7.49□□□□□ -1.21
LSM4YER112W IXR1P33417 597 aa7.49□□□□□ -1.21
LSM4YER112W PTK2P47116 818 aaKnown RBP7.49□□□□□ -1.21
LSM4YER112W YLR346CQ06139 101 aa7.49□□□□□ -1.21
LSM4YER112W MMP1Q12372 583 aa7.49□□□□□ -1.21
LSM4YER112W SRF1Q12516 437 aa7.49□□□□□ -1.21
LSM4YER112W SCJ1P25303 377 aa7.48□□□□□ -1.21
LSM4YER112W ATF2P53296 535 aa7.48□□□□□ -1.21
LSM4YER112W GLN1P32288 370 aaKnown RBP7.47□□□□□ -1.21
LSM4YER112W ACO2P39533 789 aa7.46□□□□□ -1.22
LSM4YER112W OPT2Q06593 877 aa7.45□□□□□ -1.22
LSM4YER112W NUP85P46673 744 aa7.43□□□□□ -1.22
LSM4YER112W YNR021WP53723 404 aaKnown RBP7.42□□□□□ -1.22
LSM4YER112W CAF120P53836 1060 aa7.42□□□□□ -1.22
LSM4YER112W TYW1Q08960 810 aaKnown RBP7.41□□□□□ -1.22
LSM4YER112W ESS1P22696 170 aa7.4□□□□□ -1.22
LSM4YER112W VAC17P25591 423 aa7.4□□□□□ -1.22
LSM4YER112W GLY1P37303 387 aaKnown RBP7.4□□□□□ -1.22
LSM4YER112W MIP1P15801 1254 aa7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms