RNA–Protein interactions for RNA: YDR439W

LRS4, Transcript of Nucleolar protein that forms a complex with Csm1p, yeastyeast

Gene LRS4, Length 1,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LRS4YDR439W TY1A-JR2P47099 440 aa7.87□□□□□ -1.15
LRS4YDR439W TY1A-DR1Q03856 440 aa7.87□□□□□ -1.15
LRS4YDR439W TY1A-ML1Q04706 440 aaKnown RBP7.87□□□□□ -1.15
LRS4YDR439W TY1A-BRQ12217 440 aa7.87□□□□□ -1.15
LRS4YDR439W TY1A-NL2Q12470 440 aa7.87□□□□□ -1.15
LRS4YDR439W TY1A-GR2Q12485 440 aa7.87□□□□□ -1.15
LRS4YDR439W SPT16P32558 1035 aaKnown RBP7.86□□□□□ -1.15
LRS4YDR439W RGA2Q06407 1009 aa7.86□□□□□ -1.15
LRS4YDR439W CST6P40535 587 aa7.84□□□□□ -1.15
LRS4YDR439W CKB1P43639 278 aa7.82□□□□□ -1.16
LRS4YDR439W LAM6Q08001 693 aa7.82□□□□□ -1.16
LRS4YDR439W PAT1P25644 796 aaKnown RBP7.81□□□□□ -1.16
LRS4YDR439W PBS2P08018 668 aa7.79□□□□□ -1.16
LRS4YDR439W RRN7P40992 514 aa7.79□□□□□ -1.16
LRS4YDR439W AIR1P40507 360 aaKnown RBP7.78□□□□□ -1.16
LRS4YDR439W BRE2P43132 505 aa7.78□□□□□ -1.16
LRS4YDR439W CLA4P48562 842 aa7.77□□□□□ -1.17
LRS4YDR439W GCR2Q01722 534 aa7.77□□□□□ -1.17
LRS4YDR439W PSE1P32337 1089 aaKnown RBP7.76□□□□□ -1.17
LRS4YDR439W FRK1Q03002 865 aaPredicted RBP7.76□□□□□ -1.17
LRS4YDR439W KEX2P13134 814 aa7.74□□□□□ -1.17
LRS4YDR439W BDP1P46678 594 aa7.74□□□□□ -1.17
LRS4YDR439W CDC4P07834 779 aa7.73□□□□□ -1.17
LRS4YDR439W CLB5P30283 435 aa7.72□□□□□ -1.17
LRS4YDR439W HED1Q03937 162 aa7.71□□□□□ -1.18
LRS4YDR439W ERF2Q06551 359 aa7.71□□□□□ -1.18
LRS4YDR439W MAM3Q12296 706 aa7.69□□□□□ -1.18
LRS4YDR439W YPL062WQ02781 134 aa7.68□□□□□ -1.18
LRS4YDR439W DSF2P38213 736 aa7.65□□□□□ -1.18
LRS4YDR439W PAC1P39946 494 aaKnown RBP7.65□□□□□ -1.18
LRS4YDR439W RTF1P53064 558 aa7.65□□□□□ -1.18
LRS4YDR439W MOD5P07884 428 aa7.64□□□□□ -1.19
LRS4YDR439W GAR1P28007 205 aaKnown RBP7.63□□□□□ -1.19
LRS4YDR439W AGE1Q04412 482 aa7.63□□□□□ -1.19
LRS4YDR439W IES2P40154 320 aa7.62□□□□□ -1.19
LRS4YDR439W TUB4P53378 473 aa7.62□□□□□ -1.19
LRS4YDR439W SAS10Q12136 610 aaPredicted RBP7.62□□□□□ -1.19
LRS4YDR439W GBP2P25555 427 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
LRS4YDR439W YNL115CP53925 644 aa7.61□□□□□ -1.19
LRS4YDR439W SIT4P20604 311 aa7.6□□□□□ -1.19
LRS4YDR439W MET22P32179 357 aa7.58□□□□□ -1.2
LRS4YDR439W TEA1P47988 759 aa7.58□□□□□ -1.2
LRS4YDR439W NUP42P49686 430 aaKnown RBP7.57□□□□□ -1.2
LRS4YDR439W ENV9Q08651 330 aa7.57□□□□□ -1.2
LRS4YDR439W ASH1P34233 588 aa7.56□□□□□ -1.2
LRS4YDR439W MET32Q12041 191 aa7.56□□□□□ -1.2
LRS4YDR439W AFT1P22149 690 aa7.55□□□□□ -1.2
LRS4YDR439W HST3P53687 447 aa7.54□□□□□ -1.2
LRS4YDR439W PUS5Q06244 254 aa7.54□□□□□ -1.2
LRS4YDR439W DMA1P38823 416 aa7.53□□□□□ -1.2
LRS4YDR439W KXD1P53158 218 aa7.53□□□□□ -1.2
LRS4YDR439W NIS1P53939 407 aa7.53□□□□□ -1.2
LRS4YDR439W SPB4P25808 606 aaPredicted RBP7.52□□□□□ -1.21
LRS4YDR439W TPD3P31383 635 aa7.52□□□□□ -1.21
LRS4YDR439W YDR444WQ04093 687 aa7.51□□□□□ -1.21
LRS4YDR439W DIT2P21595 489 aa7.5□□□□□ -1.21
LRS4YDR439W HXT10P43581 546 aa7.48□□□□□ -1.21
LRS4YDR439W SLY41P22215 453 aa7.46□□□□□ -1.22
LRS4YDR439W RRD1P40454 393 aaKnown RBP7.46□□□□□ -1.22
LRS4YDR439W FPK1P53739 893 aa7.46□□□□□ -1.22
LRS4YDR439W LCB5Q06147 687 aaKnown RBP7.46□□□□□ -1.22
LRS4YDR439W PDC1P06169 563 aaKnown RBP7.45□□□□□ -1.22
LRS4YDR439W SYH1Q02875 849 aaKnown RBP7.45□□□□□ -1.22
LRS4YDR439W YMR196WQ04336 1088 aa7.45□□□□□ -1.22
LRS4YDR439W YJR115WP47152 169 aa7.44□□□□□ -1.22
LRS4YDR439W MSB3P48566 633 aaPredicted RBP7.42□□□□□ -1.22
LRS4YDR439W PUS6P53294 404 aa7.42□□□□□ -1.22
LRS4YDR439W RPA14P50106 137 aa7.4□□□□□ -1.22
LRS4YDR439W ALR1Q08269 859 aa7.4□□□□□ -1.22
LRS4YDR439W TBF1Q02457 562 aa7.39□□□□□ -1.23
LRS4YDR439W YPR097WQ06839 1073 aa7.39□□□□□ -1.23
LRS4YDR439W YDL176WQ12027 708 aa7.39□□□□□ -1.23
LRS4YDR439W HST2P53686 357 aa7.38□□□□□ -1.23
LRS4YDR439W YDL206WQ12424 762 aa7.38□□□□□ -1.23
LRS4YDR439W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
LRS4YDR439W UGA3P26370 528 aa7.35□□□□□ -1.23
LRS4YDR439W KIP2P28743 706 aa7.35□□□□□ -1.23
LRS4YDR439W SCJ1P25303 377 aa7.34□□□□□ -1.23
LRS4YDR439W MMP1Q12372 583 aa7.34□□□□□ -1.23
LRS4YDR439W TRM1P15565 570 aaKnown RBP7.33□□□□□ -1.24
LRS4YDR439W IXR1P33417 597 aa7.33□□□□□ -1.24
LRS4YDR439W ATF2P53296 535 aa7.33□□□□□ -1.24
LRS4YDR439W RTT106P40161 455 aa7.32□□□□□ -1.24
LRS4YDR439W GLN1P32288 370 aaKnown RBP7.31□□□□□ -1.24
LRS4YDR439W MRT4P33201 236 aaKnown RBP7.31□□□□□ -1.24
LRS4YDR439W PTK2P47116 818 aaKnown RBP7.31□□□□□ -1.24
LRS4YDR439W YLR346CQ06139 101 aa7.3□□□□□ -1.24
LRS4YDR439W SRF1Q12516 437 aa7.3□□□□□ -1.24
LRS4YDR439W ACO2P39533 789 aa7.28□□□□□ -1.24
LRS4YDR439W RQC2Q12532 1038 aaKnown RBP7.28□□□□□ -1.24
LRS4YDR439W YNR021WP53723 404 aaKnown RBP7.27□□□□□ -1.25
LRS4YDR439W OPT2Q06593 877 aa7.27□□□□□ -1.25
LRS4YDR439W ESS1P22696 170 aa7.26□□□□□ -1.25
LRS4YDR439W NUP85P46673 744 aa7.26□□□□□ -1.25
LRS4YDR439W CAF120P53836 1060 aa7.24□□□□□ -1.25
LRS4YDR439W VAC17P25591 423 aa7.23□□□□□ -1.25
LRS4YDR439W GLY1P37303 387 aaKnown RBP7.23□□□□□ -1.25
LRS4YDR439W TYW1Q08960 810 aaKnown RBP7.23□□□□□ -1.25
LRS4YDR439W YJU3P28321 313 aa7.21□□□□□ -1.26
LRS4YDR439W GLC3P32775 704 aa7.21□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms