RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeastyeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAL1YDR348C IME2P32581 645 aa6.44□□□□□ -1.38
PAL1YDR348C IES2P40154 320 aa6.44□□□□□ -1.38
PAL1YDR348C MAM3Q12296 706 aa6.44□□□□□ -1.38
PAL1YDR348C COX6P00427 148 aa6.43□□□□□ -1.38
PAL1YDR348C CLC1P17891 233 aa6.43□□□□□ -1.38
PAL1YDR348C PML39Q03760 334 aa6.43□□□□□ -1.38
PAL1YDR348C KEX1P09620 729 aa6.42□□□□□ -1.38
PAL1YDR348C NUP42P49686 430 aaKnown RBP6.42□□□□□ -1.38
PAL1YDR348C DIT2P21595 489 aa6.4□□□□□ -1.38
PAL1YDR348C PCS60P38137 543 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
PAL1YDR348C RPN1P38764 993 aaKnown RBP6.4□□□□□ -1.38
PAL1YDR348C MAK21Q12176 1025 aaKnown RBP6.4□□□□□ -1.38
PAL1YDR348C ULS1Q08562 1619 aa6.4□□□□□ -1.38
PAL1YDR348C TY3B-GQ99315 1547 aa6.4□□□□□ -1.39
PAL1YDR348C RPO31P04051 1460 aa6.39□□□□□ -1.39
PAL1YDR348C TOP2P06786 1428 aaKnown RBP6.39□□□□□ -1.39
PAL1YDR348C SIS2P36024 562 aa6.39□□□□□ -1.39
PAL1YDR348C YFR016CP43597 1233 aaKnown RBP6.39□□□□□ -1.39
PAL1YDR348C MPH3P0CE00 602 aa6.38□□□□□ -1.39
PAL1YDR348C OPY1P38271 328 aa6.38□□□□□ -1.39
PAL1YDR348C TCB2P48231 1178 aa6.38□□□□□ -1.39
PAL1YDR348C NUP159P40477 1460 aa6.37□□□□□ -1.39
PAL1YDR348C AI4P03878 556 aa6.37□□□□□ -1.39
PAL1YDR348C CHL1P22516 861 aaPredicted RBP6.37□□□□□ -1.39
PAL1YDR348C VPS15P22219 1454 aa6.37□□□□□ -1.39
PAL1YDR348C RPC31P17890 251 aa6.36□□□□□ -1.39
PAL1YDR348C RAD54P32863 898 aa6.36□□□□□ -1.39
PAL1YDR348C PRE3P38624 215 aa6.36□□□□□ -1.39
PAL1YDR348C MID1P41821 548 aa6.36□□□□□ -1.39
PAL1YDR348C DNF1P32660 1571 aa6.36□□□□□ -1.39
PAL1YDR348C MHP1P43638 1398 aa6.36□□□□□ -1.39
PAL1YDR348C GLC3P32775 704 aa6.35□□□□□ -1.39
PAL1YDR348C YNR021WP53723 404 aaKnown RBP6.35□□□□□ -1.39
PAL1YDR348C YDR344CQ05510 147 aa6.35□□□□□ -1.39
PAL1YDR348C TY1B-DR3Q99231 1755 aa6.34□□□□□ -1.39
PAL1YDR348C FUN12P39730 1002 aaKnown RBP6.34□□□□□ -1.39
PAL1YDR348C EAF7P53911 425 aaKnown RBP6.34□□□□□ -1.39
PAL1YDR348C MNN4P36044 1178 aa6.33□□□□□ -1.4
PAL1YDR348C IRC20Q06554 1556 aa6.32□□□□□ -1.4
PAL1YDR348C SLI15P38283 698 aa6.32□□□□□ -1.4
PAL1YDR348C KIC1P38692 1080 aa6.32□□□□□ -1.4
PAL1YDR348C ELP4Q02884 456 aaKnown RBP6.32□□□□□ -1.4
PAL1YDR348C ESC1Q03661 1658 aaKnown RBP6.32□□□□□ -1.4
PAL1YDR348C ORC6P38826 435 aa6.31□□□□□ -1.4
PAL1YDR348C PEX29Q03370 554 aa6.3□□□□□ -1.4
PAL1YDR348C TY2B-LR1P0C2J3 1770 aa6.3□□□□□ -1.4
PAL1YDR348C TY2B-FP0CX63 1770 aa6.3□□□□□ -1.4
PAL1YDR348C TY2B-GR2P0CX64 1770 aa6.3□□□□□ -1.4
PAL1YDR348C TY2B-CP25384 1770 aa6.3□□□□□ -1.4
PAL1YDR348C TY2B-DR2Q03494 1770 aa6.3□□□□□ -1.4
PAL1YDR348C TY1B-DR1Q03855 1755 aa6.3□□□□□ -1.4
PAL1YDR348C TY2B-DR3Q07791 1770 aaKnown RBP6.3□□□□□ -1.4
PAL1YDR348C TY2B-OR1Q12113 1770 aa6.3□□□□□ -1.4
PAL1YDR348C TY2B-DR1Q12472 1770 aa6.3□□□□□ -1.4
PAL1YDR348C TY2B-OR2Q12501 1770 aa6.3□□□□□ -1.4
PAL1YDR348C YBT1P32386 1661 aa6.29□□□□□ -1.4
PAL1YDR348C KIN1P13185 1064 aa6.29□□□□□ -1.4
PAL1YDR348C BCK2P33306 851 aa6.29□□□□□ -1.4
PAL1YDR348C ARH1P48360 493 aa6.29□□□□□ -1.4
PAL1YDR348C SNF7P39929 240 aaKnown RBP6.28□□□□□ -1.4
PAL1YDR348C ORC1P54784 914 aaPredicted RBP6.27□□□□□ -1.41
PAL1YDR348C AIM7Q12156 149 aa6.27□□□□□ -1.41
PAL1YDR348C TY2B-BQ12491 1770 aa6.27□□□□□ -1.41
PAL1YDR348C GCN2P15442 1659 aa6.27□□□□□ -1.41
PAL1YDR348C CDC73Q06697 393 aa6.26□□□□□ -1.41
PAL1YDR348C MMS1Q06211 1407 aa6.25□□□□□ -1.41
PAL1YDR348C GAP1P19145 602 aaPredicted RBP6.25□□□□□ -1.41
PAL1YDR348C PSE1P32337 1089 aaKnown RBP6.25□□□□□ -1.41
PAL1YDR348C NOP7P53261 605 aaKnown RBP6.25□□□□□ -1.41
PAL1YDR348C MPC54Q08550 464 aa6.25□□□□□ -1.41
PAL1YDR348C PDR5P33302 1511 aaKnown RBP6.24□□□□□ -1.41
PAL1YDR348C VRP1P37370 817 aa6.23□□□□□ -1.41
PAL1YDR348C DMA2P53924 522 aa6.23□□□□□ -1.41
PAL1YDR348C HAP5Q02516 242 aa6.23□□□□□ -1.41
PAL1YDR348C URN1Q06525 465 aaKnown RBP6.23□□□□□ -1.41
PAL1YDR348C GEA2P39993 1459 aaKnown RBP6.22□□□□□ -1.41
PAL1YDR348C RGR1P19263 1082 aa6.22□□□□□ -1.41
PAL1YDR348C SPT23P35210 1082 aa6.22□□□□□ -1.41
PAL1YDR348C ATF2P53296 535 aa6.22□□□□□ -1.41
PAL1YDR348C VTH1P40438 1549 aa6.21□□□□□ -1.41
PAL1YDR348C VTH2P40890 1549 aa6.21□□□□□ -1.41
PAL1YDR348C ROX1P25042 368 aa6.21□□□□□ -1.42
PAL1YDR348C MVP1P40959 511 aaKnown RBP6.21□□□□□ -1.42
PAL1YDR348C MDS3P53094 1487 aa6.21□□□□□ -1.42
PAL1YDR348C YIR014WP40570 242 aa6.2□□□□□ -1.42
PAL1YDR348C PDS5Q04264 1277 aa6.2□□□□□ -1.42
PAL1YDR348C SNT2P53127 1403 aa6.2□□□□□ -1.42
PAL1YDR348C FPR3P38911 411 aaKnown RBP6.2□□□□□ -1.42
PAL1YDR348C NMA111P53920 997 aa6.2□□□□□ -1.42
PAL1YDR348C DPL1Q05567 589 aa6.2□□□□□ -1.42
PAL1YDR348C AIM44Q99299 758 aa6.19□□□□□ -1.42
PAL1YDR348C GDB1Q06625 1536 aa6.19□□□□□ -1.42
PAL1YDR348C TY1B-HO13535 1793 aa6.19□□□□□ -1.42
PAL1YDR348C TY1B-DR5P0C2I2 1755 aa6.19□□□□□ -1.42
PAL1YDR348C TY1B-DR6P0C2I3 1755 aa6.19□□□□□ -1.42
PAL1YDR348C TY1B-LR2P0C2I5 1755 aa6.19□□□□□ -1.42
PAL1YDR348C TY1B-LR3P0C2I6 1755 aaKnown RBP6.19□□□□□ -1.42
PAL1YDR348C TY1B-PR1P0C2I9 1755 aaKnown RBP6.19□□□□□ -1.42
PAL1YDR348C TY1B-PR2P0C2J0 1756 aa6.19□□□□□ -1.42
PAL1YDR348C TY1B-PR3P0C2J1 1755 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms