RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W SLX5P32828 619 aaKnown RBP3.54□□□□□ -1.84
SWR1YDR334W SEC7P11075 2009 aaKnown RBP3.54□□□□□ -1.84
SWR1YDR334W ABP1P15891 592 aaKnown RBP3.54□□□□□ -1.84
SWR1YDR334W MAP2P38174 421 aaKnown RBP3.54□□□□□ -1.84
SWR1YDR334W PDR5P33302 1511 aaKnown RBP3.53□□□□□ -1.84
SWR1YDR334W SCY1P53009 804 aa3.53□□□□□ -1.84
SWR1YDR334W COQ8P27697 501 aa3.52□□□□□ -1.85
SWR1YDR334W SAM3Q08986 587 aa3.52□□□□□ -1.85
SWR1YDR334W TSC11P40061 1430 aa3.52□□□□□ -1.85
SWR1YDR334W SPP41P38904 1435 aa3.52□□□□□ -1.85
SWR1YDR334W TIF4632P39936 914 aaKnown RBP3.52□□□□□ -1.85
SWR1YDR334W COX6P00427 148 aa3.51□□□□□ -1.85
SWR1YDR334W REF2P42073 533 aaPredicted RBP3.51□□□□□ -1.85
SWR1YDR334W PBS2P08018 668 aa3.51□□□□□ -1.85
SWR1YDR334W YAP5P40574 245 aa3.5□□□□□ -1.85
SWR1YDR334W RCR1P38212 213 aa3.49□□□□□ -1.85
SWR1YDR334W HGH1P48362 394 aaKnown RBP3.48□□□□□ -1.85
SWR1YDR334W VPS70P47161 811 aa3.48□□□□□ -1.85
SWR1YDR334W MAM3Q12296 706 aa3.48□□□□□ -1.85
SWR1YDR334W HPC2Q01448 625 aa3.47□□□□□ -1.85
SWR1YDR334W STS1P38637 319 aa3.47□□□□□ -1.85
SWR1YDR334W NUP42P49686 430 aaKnown RBP3.47□□□□□ -1.85
SWR1YDR334W MMS1Q06211 1407 aa3.47□□□□□ -1.85
SWR1YDR334W NUP192P47054 1683 aa3.47□□□□□ -1.85
SWR1YDR334W PTC3P34221 468 aaKnown RBP3.46□□□□□ -1.86
SWR1YDR334W PSE1P32337 1089 aaKnown RBP3.46□□□□□ -1.86
SWR1YDR334W EDS1P38073 919 aa3.46□□□□□ -1.86
SWR1YDR334W SPB4P25808 606 aaPredicted RBP3.46□□□□□ -1.86
SWR1YDR334W GUT1P32190 709 aa3.46□□□□□ -1.86
SWR1YDR334W RLF2Q12495 606 aa3.46□□□□□ -1.86
SWR1YDR334W YOR238WQ08634 303 aa3.45□□□□□ -1.86
SWR1YDR334W NST1P53935 1240 aa3.45□□□□□ -1.86
SWR1YDR334W MSB4Q12317 492 aa3.45□□□□□ -1.86
SWR1YDR334W GCN2P15442 1659 aa3.44□□□□□ -1.86
SWR1YDR334W VMA1P17255 1071 aaKnown RBP3.44□□□□□ -1.86
SWR1YDR334W DBP1P24784 617 aaKnown RBP3.44□□□□□ -1.86
SWR1YDR334W YDR090CQ03193 310 aa3.44□□□□□ -1.86
SWR1YDR334W CAT8P39113 1433 aa3.44□□□□□ -1.86
SWR1YDR334W DRS2P39524 1355 aa3.43□□□□□ -1.86
SWR1YDR334W BCK1Q01389 1478 aa3.43□□□□□ -1.86
SWR1YDR334W AI4P03878 556 aa3.43□□□□□ -1.86
SWR1YDR334W GAP1P19145 602 aaPredicted RBP3.43□□□□□ -1.86
SWR1YDR334W KIN1P13185 1064 aa3.42□□□□□ -1.86
SWR1YDR334W CLB5P30283 435 aa3.42□□□□□ -1.86
SWR1YDR334W YGR273CP53329 174 aa3.42□□□□□ -1.86
SWR1YDR334W UBP14P38237 781 aaKnown RBP3.41□□□□□ -1.86
SWR1YDR334W GRE2Q12068 342 aaKnown RBP3.41□□□□□ -1.86
SWR1YDR334W MPH3P0CE00 602 aa3.41□□□□□ -1.86
SWR1YDR334W SKI3P17883 1432 aaKnown RBP3.4□□□□□ -1.86
SWR1YDR334W YLR326WQ06170 240 aaKnown RBP3.4□□□□□ -1.87
SWR1YDR334W EDE1P34216 1381 aa3.39□□□□□ -1.87
SWR1YDR334W EAP1P36041 632 aaKnown RBP3.39□□□□□ -1.87
SWR1YDR334W IES2P40154 320 aa3.39□□□□□ -1.87
SWR1YDR334W SSA2P10592 639 aaKnown RBP3.38□□□□□ -1.87
SWR1YDR334W ORC6P38826 435 aa3.38□□□□□ -1.87
SWR1YDR334W ATH1P48016 1211 aa3.38□□□□□ -1.87
SWR1YDR334W SOL3P38858 249 aa3.38□□□□□ -1.87
SWR1YDR334W KEX1P09620 729 aa3.37□□□□□ -1.87
SWR1YDR334W DIT2P21595 489 aa3.36□□□□□ -1.87
SWR1YDR334W RPP1BP10622 106 aaKnown RBP3.36□□□□□ -1.87
SWR1YDR334W ORC1P54784 914 aaPredicted RBP3.36□□□□□ -1.87
SWR1YDR334W JIP4Q03361 876 aa3.36□□□□□ -1.87
SWR1YDR334W AIM44Q99299 758 aa3.36□□□□□ -1.87
SWR1YDR334W CSE4P36012 229 aa3.36□□□□□ -1.87
SWR1YDR334W SNF2P22082 1703 aa3.35□□□□□ -1.87
SWR1YDR334W RRP5Q05022 1729 aaKnown RBP3.35□□□□□ -1.87
SWR1YDR334W CSC1Q06538 782 aa3.35□□□□□ -1.87
SWR1YDR334W GYP5Q12344 894 aa3.35□□□□□ -1.87
SWR1YDR334W RTT106P40161 455 aa3.35□□□□□ -1.87
SWR1YDR334W DMA2P53924 522 aa3.35□□□□□ -1.87
SWR1YDR334W TFB4Q12004 338 aa3.35□□□□□ -1.87
SWR1YDR334W HTA1P04911 132 aaKnown RBP3.35□□□□□ -1.87
SWR1YDR334W HTA2P04912 132 aa3.35□□□□□ -1.87
SWR1YDR334W PCS60P38137 543 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87 RIP-Chip
SWR1YDR334W RAD54P32863 898 aa3.34□□□□□ -1.87
SWR1YDR334W KIC1P38692 1080 aa3.34□□□□□ -1.87
SWR1YDR334W RTF1P53064 558 aa3.34□□□□□ -1.87
SWR1YDR334W SPT5P27692 1063 aaKnown RBP3.34□□□□□ -1.88
SWR1YDR334W ASF1P32447 279 aa3.34□□□□□ -1.88
SWR1YDR334W YOL036WQ08206 761 aa3.33□□□□□ -1.88
SWR1YDR334W TY3B-IQ7LHG5 1498 aaKnown RBP3.33□□□□□ -1.88
SWR1YDR334W SIT4P20604 311 aa3.33□□□□□ -1.88
SWR1YDR334W GLC3P32775 704 aa3.33□□□□□ -1.88
SWR1YDR334W PTC4P38089 393 aa3.33□□□□□ -1.88
SWR1YDR334W HST2P53686 357 aa3.33□□□□□ -1.88
SWR1YDR334W SIS2P36024 562 aa3.32□□□□□ -1.88
SWR1YDR334W YFR006WP43590 535 aa3.32□□□□□ -1.88
SWR1YDR334W ATF2P53296 535 aa3.32□□□□□ -1.88
SWR1YDR334W URN1Q06525 465 aaKnown RBP3.32□□□□□ -1.88
SWR1YDR334W YTA7P40340 1379 aa3.32□□□□□ -1.88
SWR1YDR334W FKS3Q04952 1785 aa3.32□□□□□ -1.88
SWR1YDR334W DAN4P47179 1161 aa3.32□□□□□ -1.88
SWR1YDR334W RGR1P19263 1082 aa3.31□□□□□ -1.88
SWR1YDR334W FPR3P38911 411 aaKnown RBP3.31□□□□□ -1.88
SWR1YDR334W GUA1P38625 525 aaKnown RBP3.31□□□□□ -1.88
SWR1YDR334W MVP1P40959 511 aaKnown RBP3.31□□□□□ -1.88
SWR1YDR334W BRL1P38770 471 aa3.31□□□□□ -1.88
SWR1YDR334W VHR2P40041 505 aa3.3□□□□□ -1.88
SWR1YDR334W TEA1P47988 759 aa3.3□□□□□ -1.88
SWR1YDR334W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms