RNA–Protein interactions for RNA: YDR220C

YDR220C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR220C, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR220CYDR220C NPL4P33755 580 aa9.17□□□□□ -0.94
YDR220CYDR220C DMA1P38823 416 aa9.17□□□□□ -0.94
YDR220CYDR220C YEL077CQ3E7X8 1277 aa9.17□□□□□ -0.94
YDR220CYDR220C GCD11P32481 527 aaKnown RBP9.16□□□□□ -0.94
YDR220CYDR220C MRF1P30775 413 aaPredicted RBP9.15□□□□□ -0.94
YDR220CYDR220C CKB1P43639 278 aa9.15□□□□□ -0.94
YDR220CYDR220C TRK1P12685 1235 aa9.13□□□□□ -0.95
YDR220CYDR220C CST6P40535 587 aa9.12□□□□□ -0.95
YDR220CYDR220C ERG12P07277 443 aa9.09□□□□□ -0.95
YDR220CYDR220C ERF2Q06551 359 aa9.09□□□□□ -0.95
YDR220CYDR220C SAS10Q12136 610 aaPredicted RBP9.08□□□□□ -0.96
YDR220CYDR220C KEX2P13134 814 aa9.07□□□□□ -0.96
YDR220CYDR220C CLA4P48562 842 aa9.07□□□□□ -0.96
YDR220CYDR220C SPT16P32558 1035 aaKnown RBP9.06□□□□□ -0.96
YDR220CYDR220C RRN7P40992 514 aa9.06□□□□□ -0.96
YDR220CYDR220C PSE1P32337 1089 aaKnown RBP9.05□□□□□ -0.96
YDR220CYDR220C AIR1P40507 360 aaKnown RBP9.05□□□□□ -0.96
YDR220CYDR220C MAM3Q12296 706 aa9.05□□□□□ -0.96
YDR220CYDR220C LAM6Q08001 693 aa9.04□□□□□ -0.96
YDR220CYDR220C DSF2P38213 736 aa9.03□□□□□ -0.96
YDR220CYDR220C IES2P40154 320 aa9.03□□□□□ -0.96
YDR220CYDR220C FRK1Q03002 865 aaPredicted RBP9.01□□□□□ -0.97
YDR220CYDR220C BDP1P46678 594 aa8.98□□□□□ -0.97
YDR220CYDR220C NUP42P49686 430 aaKnown RBP8.97□□□□□ -0.97
YDR220CYDR220C PAC1P39946 494 aaKnown RBP8.96□□□□□ -0.98
YDR220CYDR220C AGE1Q04412 482 aa8.94□□□□□ -0.98
YDR220CYDR220C PAT1P25644 796 aaKnown RBP8.93□□□□□ -0.98
YDR220CYDR220C CLB5P30283 435 aa8.93□□□□□ -0.98
YDR220CYDR220C DIT2P21595 489 aa8.91□□□□□ -0.98
YDR220CYDR220C TUB4P53378 473 aa8.91□□□□□ -0.98
YDR220CYDR220C SPB4P25808 606 aaPredicted RBP8.9□□□□□ -0.98
YDR220CYDR220C RGA1P39083 1007 aa8.88□□□□□ -0.99
YDR220CYDR220C NIS1P53939 407 aa8.88□□□□□ -0.99
YDR220CYDR220C MOD5P07884 428 aa8.87□□□□□ -0.99
YDR220CYDR220C BRE2P43132 505 aa8.87□□□□□ -0.99
YDR220CYDR220C TEA1P47988 759 aa8.87□□□□□ -0.99
YDR220CYDR220C SIT4P20604 311 aa8.86□□□□□ -0.99
YDR220CYDR220C YNL115CP53925 644 aa8.85□□□□□ -0.99
YDR220CYDR220C CDC4P07834 779 aa8.84□□□□□ -0.99
YDR220CYDR220C RTF1P53064 558 aa8.84□□□□□ -0.99
YDR220CYDR220C HED1Q03937 162 aa8.82□□□□□ -1
YDR220CYDR220C PUS5Q06244 254 aa8.82□□□□□ -1
YDR220CYDR220C FPK1P53739 893 aa8.78□□□□□ -1
YDR220CYDR220C MET32Q12041 191 aa8.78□□□□□ -1
YDR220CYDR220C GCR2Q01722 534 aa8.77□□□□□ -1.01
YDR220CYDR220C RGA2Q06407 1009 aa8.77□□□□□ -1.01
YDR220CYDR220C SLY41P22215 453 aa8.74□□□□□ -1.01
YDR220CYDR220C SCJ1P25303 377 aa8.72□□□□□ -1.01
YDR220CYDR220C GAR1P28007 205 aaKnown RBP8.72□□□□□ -1.01
YDR220CYDR220C YMR196WQ04336 1088 aa8.72□□□□□ -1.01
YDR220CYDR220C PDC1P06169 563 aaKnown RBP8.7□□□□□ -1.02
YDR220CYDR220C ASH1P34233 588 aa8.7□□□□□ -1.02
YDR220CYDR220C KXD1P53158 218 aa8.69□□□□□ -1.02
YDR220CYDR220C MET22P32179 357 aa8.68□□□□□ -1.02
YDR220CYDR220C RRD1P40454 393 aaKnown RBP8.68□□□□□ -1.02
YDR220CYDR220C HXT10P43581 546 aa8.68□□□□□ -1.02
YDR220CYDR220C YPL062WQ02781 134 aa8.68□□□□□ -1.02
YDR220CYDR220C AFT1P22149 690 aa8.66□□□□□ -1.02
YDR220CYDR220C TPD3P31383 635 aa8.66□□□□□ -1.02
YDR220CYDR220C HST2P53686 357 aa8.64□□□□□ -1.03
YDR220CYDR220C YDL206WQ12424 762 aa8.64□□□□□ -1.03
YDR220CYDR220C GLC3P32775 704 aa8.63□□□□□ -1.03
YDR220CYDR220C HST3P53687 447 aa8.63□□□□□ -1.03
YDR220CYDR220C TRM1P15565 570 aaKnown RBP8.62□□□□□ -1.03
YDR220CYDR220C ATF2P53296 535 aa8.62□□□□□ -1.03
YDR220CYDR220C PUS6P53294 404 aa8.61□□□□□ -1.03
YDR220CYDR220C ENV9Q08651 330 aa8.61□□□□□ -1.03
YDR220CYDR220C TBF1Q02457 562 aa8.6□□□□□ -1.03
YDR220CYDR220C MMP1Q12372 583 aa8.6□□□□□ -1.03
YDR220CYDR220C ESS1P22696 170 aa8.59□□□□□ -1.03
YDR220CYDR220C GBP2P25555 427 aaKnown RBP RIP-Chip data8.59□□□□□ -1.03not detected
YDR220CYDR220C RPA14P50106 137 aa8.59□□□□□ -1.03
YDR220CYDR220C SYH1Q02875 849 aaKnown RBP8.59□□□□□ -1.03
YDR220CYDR220C YJR115WP47152 169 aa8.58□□□□□ -1.04
YDR220CYDR220C YDR444WQ04093 687 aa8.58□□□□□ -1.04
YDR220CYDR220C YPR097WQ06839 1073 aa8.58□□□□□ -1.04
YDR220CYDR220C ALR1Q08269 859 aa8.58□□□□□ -1.04
YDR220CYDR220C YNR021WP53723 404 aaKnown RBP8.57□□□□□ -1.04
YDR220CYDR220C TYW1Q08960 810 aaKnown RBP8.57□□□□□ -1.04
YDR220CYDR220C YJU3P28321 313 aa8.56□□□□□ -1.04
YDR220CYDR220C GLN1P32288 370 aaKnown RBP8.55□□□□□ -1.04
YDR220CYDR220C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
YDR220CYDR220C LCB5Q06147 687 aaKnown RBP8.53□□□□□ -1.04
YDR220CYDR220C KTR1P27810 393 aaKnown RBP8.52□□□□□ -1.05
YDR220CYDR220C KIP2P28743 706 aa8.52□□□□□ -1.05
YDR220CYDR220C MSB3P48566 633 aaPredicted RBP8.51□□□□□ -1.05
YDR220CYDR220C IXR1P33417 597 aa8.5□□□□□ -1.05
YDR220CYDR220C YDL176WQ12027 708 aa8.49□□□□□ -1.05
YDR220CYDR220C RSC30P38781 883 aa8.47□□□□□ -1.05
YDR220CYDR220C UGA3P26370 528 aa8.46□□□□□ -1.06
YDR220CYDR220C MRT4P33201 236 aaKnown RBP8.45□□□□□ -1.06
YDR220CYDR220C PKH3Q03306 898 aaPredicted RBP8.45□□□□□ -1.06
YDR220CYDR220C ITT1Q04638 464 aa8.45□□□□□ -1.06
YDR220CYDR220C PTK2P47116 818 aaKnown RBP8.44□□□□□ -1.06
YDR220CYDR220C AIM7Q12156 149 aa8.44□□□□□ -1.06
YDR220CYDR220C VAC17P25591 423 aa8.42□□□□□ -1.06
YDR220CYDR220C ARG8P18544 423 aa8.39□□□□□ -1.07
YDR220CYDR220C CSN12P47130 423 aa8.39□□□□□ -1.07
YDR220CYDR220C OPT2Q06593 877 aa8.38□□□□□ -1.07
YDR220CYDR220C SRF1Q12516 437 aa8.38□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms