RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C RAD59Q12223 238 aa4.01□□□□□ -1.77
SOK1YDR006C FAR11P53917 953 aa4.01□□□□□ -1.77
SOK1YDR006C SSA2P10592 639 aaKnown RBP4.01□□□□□ -1.77
SOK1YDR006C RDS2P19541 446 aaKnown RBP4.01□□□□□ -1.77
SOK1YDR006C PUP1P25043 261 aa4.01□□□□□ -1.77
SOK1YDR006C TPO2P53283 614 aa4.01□□□□□ -1.77
SOK1YDR006C SEN54Q02825 467 aaPredicted RBP4.01□□□□□ -1.77
SOK1YDR006C TOP1P04786 769 aa4□□□□□ -1.77
SOK1YDR006C MRX10Q05648 414 aa4□□□□□ -1.77
SOK1YDR006C YPR109WQ06104 294 aa4□□□□□ -1.77
SOK1YDR006C ENO2P00925 437 aaKnown RBP4□□□□□ -1.77
SOK1YDR006C SAP30P38429 201 aa4□□□□□ -1.77
SOK1YDR006C KIC1P38692 1080 aa4□□□□□ -1.77
SOK1YDR006C YDR344CQ05510 147 aa4□□□□□ -1.77
SOK1YDR006C ERF2Q06551 359 aa4□□□□□ -1.77
SOK1YDR006C HTA1P04911 132 aaKnown RBP3.99□□□□□ -1.77
SOK1YDR006C HTA2P04912 132 aa3.99□□□□□ -1.77
SOK1YDR006C YEL023CP39992 682 aa3.99□□□□□ -1.77
SOK1YDR006C SEC61P32915 480 aa3.99□□□□□ -1.77
SOK1YDR006C MID1P41821 548 aa3.99□□□□□ -1.77
SOK1YDR006C YPR204WQ08995 1032 aa3.99□□□□□ -1.77
SOK1YDR006C ENO1P00924 437 aaKnown RBP3.98□□□□□ -1.77
SOK1YDR006C RTG2P32608 588 aaKnown RBP3.98□□□□□ -1.77
SOK1YDR006C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
SOK1YDR006C OCA5P38738 679 aa3.98□□□□□ -1.77
SOK1YDR006C PKH3Q03306 898 aaPredicted RBP3.98□□□□□ -1.77
SOK1YDR006C SPC42P36094 363 aa3.97□□□□□ -1.77
SOK1YDR006C RIM21P48565 533 aa3.97□□□□□ -1.77
SOK1YDR006C JIP4Q03361 876 aa3.96□□□□□ -1.78
SOK1YDR006C MMP1Q12372 583 aa3.96□□□□□ -1.78
SOK1YDR006C YBL036CP38197 257 aa3.96□□□□□ -1.78
SOK1YDR006C TPS3P38426 1054 aaKnown RBP3.95□□□□□ -1.78
SOK1YDR006C TUM1Q08686 304 aaKnown RBP3.95□□□□□ -1.78
SOK1YDR006C PEP12P32854 288 aa3.95□□□□□ -1.78
SOK1YDR006C DOS2P54858 310 aa3.95□□□□□ -1.78
SOK1YDR006C HGH1P48362 394 aaKnown RBP3.94□□□□□ -1.78
SOK1YDR006C YDL129WQ07555 291 aa3.94□□□□□ -1.78
SOK1YDR006C AIM44Q99299 758 aa3.94□□□□□ -1.78
SOK1YDR006C AGE1Q04412 482 aa3.93□□□□□ -1.78
SOK1YDR006C CSC1Q06538 782 aa3.93□□□□□ -1.78
SOK1YDR006C MPC54Q08550 464 aa3.93□□□□□ -1.78
SOK1YDR006C SSA4P22202 642 aaKnown RBP3.93□□□□□ -1.78
SOK1YDR006C MAK16P10962 306 aaPredicted RBP3.93□□□□□ -1.78
SOK1YDR006C SEC2P17065 759 aa3.93□□□□□ -1.78
SOK1YDR006C ELP4Q02884 456 aaKnown RBP3.93□□□□□ -1.78
SOK1YDR006C RRP15Q06511 250 aaPredicted RBP3.93□□□□□ -1.78
SOK1YDR006C TY1A-DR4O74302 440 aa3.92□□□□□ -1.78
SOK1YDR006C TY1A-HP0C2I4 478 aaKnown RBP3.92□□□□□ -1.78
SOK1YDR006C TY1A-AP0CX57 440 aa3.92□□□□□ -1.78
SOK1YDR006C TY1A-PR1P0CX58 440 aa3.92□□□□□ -1.78
SOK1YDR006C TY1A-ORP0CX59 440 aa3.92□□□□□ -1.78
SOK1YDR006C TY1A-PR2P0CX60 440 aa3.92□□□□□ -1.78
SOK1YDR006C TY1A-DR5P0CX65 440 aa3.92□□□□□ -1.78
SOK1YDR006C TY1A-ER2P0CX66 440 aa3.92□□□□□ -1.78
SOK1YDR006C TY1A-GR3P0CX67 440 aa3.92□□□□□ -1.78
SOK1YDR006C TY1A-LR1P0CX68 440 aa3.92□□□□□ -1.78
SOK1YDR006C TY1A-MR2P0CX69 440 aa3.92□□□□□ -1.78
SOK1YDR006C PTC4P38089 393 aa3.92□□□□□ -1.78
SOK1YDR006C TY1A-JR2P47099 440 aa3.92□□□□□ -1.78
SOK1YDR006C PEX29Q03370 554 aa3.92□□□□□ -1.78
SOK1YDR006C TY1A-DR1Q03856 440 aa3.92□□□□□ -1.78
SOK1YDR006C TY1A-ML1Q04706 440 aaKnown RBP3.92□□□□□ -1.78
SOK1YDR006C TY1A-BRQ12217 440 aa3.92□□□□□ -1.78
SOK1YDR006C TY1A-NL2Q12470 440 aa3.92□□□□□ -1.78
SOK1YDR006C TY1A-GR2Q12485 440 aa3.92□□□□□ -1.78
SOK1YDR006C PDR1P12383 1068 aa3.92□□□□□ -1.78
SOK1YDR006C ARG8P18544 423 aa3.92□□□□□ -1.78
SOK1YDR006C KRI1P42846 591 aaKnown RBP3.92□□□□□ -1.78
SOK1YDR006C KEX2P13134 814 aa3.91□□□□□ -1.78
SOK1YDR006C TGL4P36165 910 aa3.91□□□□□ -1.78
SOK1YDR006C SSF1P38789 453 aaPredicted RBP3.91□□□□□ -1.78
SOK1YDR006C TRM1P15565 570 aaKnown RBP3.91□□□□□ -1.78
SOK1YDR006C CLB5P30283 435 aa3.91□□□□□ -1.78
SOK1YDR006C ISF1P32488 338 aa3.91□□□□□ -1.78
SOK1YDR006C YRR1Q12172 810 aa3.91□□□□□ -1.78
SOK1YDR006C SLY41P22215 453 aa3.9□□□□□ -1.78
SOK1YDR006C CSE4P36012 229 aa3.9□□□□□ -1.78
SOK1YDR006C STR2P47164 639 aa3.9□□□□□ -1.78
SOK1YDR006C TFB4Q12004 338 aa3.9□□□□□ -1.78
SOK1YDR006C YFR016CP43597 1233 aaKnown RBP3.9□□□□□ -1.79
SOK1YDR006C YTA7P40340 1379 aa3.9□□□□□ -1.79
SOK1YDR006C YPR084WQ06821 456 aa3.89□□□□□ -1.79
SOK1YDR006C RAM1P22007 431 aa3.89□□□□□ -1.79
SOK1YDR006C BCK2P33306 851 aa3.89□□□□□ -1.79
SOK1YDR006C ISW1P38144 1129 aa3.89□□□□□ -1.79
SOK1YDR006C PML39Q03760 334 aa3.89□□□□□ -1.79
SOK1YDR006C YMR196WQ04336 1088 aa3.89□□□□□ -1.79
SOK1YDR006C CHL1P22516 861 aaPredicted RBP3.88□□□□□ -1.79
SOK1YDR006C CWC22P53333 577 aaKnown RBP3.88□□□□□ -1.79
SOK1YDR006C DPL1Q05567 589 aa3.88□□□□□ -1.79
SOK1YDR006C RRN6P32786 894 aa3.87□□□□□ -1.79
SOK1YDR006C IPL1P38991 367 aa3.87□□□□□ -1.79
SOK1YDR006C NUG1P40010 520 aaKnown RBP3.87□□□□□ -1.79
SOK1YDR006C ISM1P48526 1002 aa3.87□□□□□ -1.79
SOK1YDR006C MDG1P53885 366 aa3.87□□□□□ -1.79
SOK1YDR006C YNL115CP53925 644 aa3.87□□□□□ -1.79
SOK1YDR006C HAT1Q12341 374 aa3.87□□□□□ -1.79
SOK1YDR006C YPR015CQ12531 247 aa3.87□□□□□ -1.79
SOK1YDR006C TRL1P09880 827 aaKnown RBP3.87□□□□□ -1.79
SOK1YDR006C YRB30P53107 440 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms