RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C TY1A-PR1P0CX58 440 aa8.8□□□□□ -1
RRI1YDL216C TY1A-ORP0CX59 440 aa8.8□□□□□ -1
RRI1YDL216C TY1A-PR2P0CX60 440 aa8.8□□□□□ -1
RRI1YDL216C TY1A-DR5P0CX65 440 aa8.8□□□□□ -1
RRI1YDL216C TY1A-ER2P0CX66 440 aa8.8□□□□□ -1
RRI1YDL216C TY1A-GR3P0CX67 440 aa8.8□□□□□ -1
RRI1YDL216C TY1A-LR1P0CX68 440 aa8.8□□□□□ -1
RRI1YDL216C TY1A-MR2P0CX69 440 aa8.8□□□□□ -1
RRI1YDL216C TY1A-JR2P47099 440 aa8.8□□□□□ -1
RRI1YDL216C NUP42P49686 430 aaKnown RBP8.8□□□□□ -1
RRI1YDL216C TY1A-DR1Q03856 440 aa8.8□□□□□ -1
RRI1YDL216C TY1A-ML1Q04706 440 aaKnown RBP8.8□□□□□ -1
RRI1YDL216C TY1A-BRQ12217 440 aa8.8□□□□□ -1
RRI1YDL216C TY1A-NL2Q12470 440 aa8.8□□□□□ -1
RRI1YDL216C TY1A-GR2Q12485 440 aa8.8□□□□□ -1
RRI1YDL216C SEC2P17065 759 aa8.79□□□□□ -1
RRI1YDL216C YNR021WP53723 404 aaKnown RBP8.79□□□□□ -1
RRI1YDL216C YEL077CQ3E7X8 1277 aa8.78□□□□□ -1
RRI1YDL216C DIT2P21595 489 aa8.74□□□□□ -1.01
RRI1YDL216C ERG12P07277 443 aa8.72□□□□□ -1.01
RRI1YDL216C KEX2P13134 814 aa8.72□□□□□ -1.01
RRI1YDL216C CLB5P30283 435 aa8.72□□□□□ -1.01
RRI1YDL216C ERF2Q06551 359 aa8.72□□□□□ -1.01
RRI1YDL216C SPT16P32558 1035 aaKnown RBP8.71□□□□□ -1.02
RRI1YDL216C RRN7P40992 514 aa8.68□□□□□ -1.02
RRI1YDL216C AIM7Q12156 149 aa8.68□□□□□ -1.02
RRI1YDL216C GLC3P32775 704 aa8.67□□□□□ -1.02
RRI1YDL216C CST6P40535 587 aa8.66□□□□□ -1.02
RRI1YDL216C ATF2P53296 535 aa8.66□□□□□ -1.02
RRI1YDL216C TRK1P12685 1235 aa8.65□□□□□ -1.02
RRI1YDL216C PAT1P25644 796 aaKnown RBP8.65□□□□□ -1.02
RRI1YDL216C TEA1P47988 759 aa8.65□□□□□ -1.02
RRI1YDL216C LAM6Q08001 693 aa8.62□□□□□ -1.03
RRI1YDL216C SIT4P20604 311 aa8.61□□□□□ -1.03
RRI1YDL216C RTF1P53064 558 aa8.6□□□□□ -1.03
RRI1YDL216C YNL115CP53925 644 aa8.6□□□□□ -1.03
RRI1YDL216C KIN1P13185 1064 aa8.59□□□□□ -1.03
RRI1YDL216C NIS1P53939 407 aa8.59□□□□□ -1.03
RRI1YDL216C FRK1Q03002 865 aaPredicted RBP8.59□□□□□ -1.03
RRI1YDL216C AGE1Q04412 482 aa8.58□□□□□ -1.04
RRI1YDL216C PAC1P39946 494 aaKnown RBP8.57□□□□□ -1.04
RRI1YDL216C BDP1P46678 594 aa8.57□□□□□ -1.04
RRI1YDL216C CLA4P48562 842 aa8.57□□□□□ -1.04
RRI1YDL216C TUB4P53378 473 aa8.56□□□□□ -1.04
RRI1YDL216C AIR1P40507 360 aaKnown RBP8.54□□□□□ -1.04
RRI1YDL216C FPK1P53739 893 aa8.53□□□□□ -1.04
RRI1YDL216C MOD5P07884 428 aa8.52□□□□□ -1.05
RRI1YDL216C YMR196WQ04336 1088 aa8.49□□□□□ -1.05
RRI1YDL216C SLY41P22215 453 aa8.48□□□□□ -1.05
RRI1YDL216C HED1Q03937 162 aa8.48□□□□□ -1.05
RRI1YDL216C CDC4P07834 779 aa8.47□□□□□ -1.05
RRI1YDL216C SCJ1P25303 377 aa8.44□□□□□ -1.06
RRI1YDL216C HST2P53686 357 aa8.44□□□□□ -1.06
RRI1YDL216C PUS5Q06244 254 aa8.44□□□□□ -1.06
RRI1YDL216C KXD1P53158 218 aa8.43□□□□□ -1.06
RRI1YDL216C BRE2P43132 505 aa8.42□□□□□ -1.06
RRI1YDL216C CSN12P47130 423 aa8.41□□□□□ -1.06
RRI1YDL216C SSA2P10592 639 aaKnown RBP8.4□□□□□ -1.06
RRI1YDL216C TPD3P31383 635 aa8.4□□□□□ -1.06
RRI1YDL216C PUS6P53294 404 aa8.4□□□□□ -1.06
RRI1YDL216C MMP1Q12372 583 aa8.4□□□□□ -1.06
RRI1YDL216C PDC1P06169 563 aaKnown RBP8.39□□□□□ -1.07
RRI1YDL216C GUA1P38625 525 aaKnown RBP8.39□□□□□ -1.07
RRI1YDL216C HXT10P43581 546 aa8.39□□□□□ -1.07
RRI1YDL216C GCR2Q01722 534 aa8.39□□□□□ -1.07
RRI1YDL216C GLN1P32288 370 aaKnown RBP8.38□□□□□ -1.07
RRI1YDL216C HPC2Q01448 625 aa8.37□□□□□ -1.07
RRI1YDL216C MET32Q12041 191 aa8.37□□□□□ -1.07
RRI1YDL216C RRD1P40454 393 aaKnown RBP8.36□□□□□ -1.07
RRI1YDL216C HGH1P48362 394 aaKnown RBP8.36□□□□□ -1.07
RRI1YDL216C TRM1P15565 570 aaKnown RBP8.35□□□□□ -1.07
RRI1YDL216C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.35□□□□□ -1.07not detected
RRI1YDL216C RPA14P50106 137 aa8.35□□□□□ -1.07
RRI1YDL216C TBF1Q02457 562 aa8.35□□□□□ -1.07
RRI1YDL216C ESS1P22696 170 aa8.34□□□□□ -1.07
RRI1YDL216C TYW1Q08960 810 aaKnown RBP8.34□□□□□ -1.07
RRI1YDL216C YDL206WQ12424 762 aa8.34□□□□□ -1.07
RRI1YDL216C ASH1P34233 588 aa8.33□□□□□ -1.08
RRI1YDL216C YPR097WQ06839 1073 aa8.33□□□□□ -1.08
RRI1YDL216C ALR1Q08269 859 aa8.33□□□□□ -1.08
RRI1YDL216C KTR1P27810 393 aaKnown RBP8.31□□□□□ -1.08
RRI1YDL216C AFT1P22149 690 aa8.3□□□□□ -1.08
RRI1YDL216C YJU3P28321 313 aa8.3□□□□□ -1.08
RRI1YDL216C DMA2P53924 522 aa8.3□□□□□ -1.08
RRI1YDL216C BRL1P38770 471 aa8.29□□□□□ -1.08
RRI1YDL216C SYH1Q02875 849 aaKnown RBP8.29□□□□□ -1.08
RRI1YDL216C HST3P53687 447 aa8.29□□□□□ -1.08
RRI1YDL216C RGA1P39083 1007 aa8.28□□□□□ -1.08
RRI1YDL216C PKH3Q03306 898 aaPredicted RBP8.27□□□□□ -1.09
RRI1YDL216C RSC30P38781 883 aa8.26□□□□□ -1.09
RRI1YDL216C TFB3Q03290 321 aa8.26□□□□□ -1.09
RRI1YDL216C KIP2P28743 706 aa8.24□□□□□ -1.09
RRI1YDL216C MET22P32179 357 aa8.24□□□□□ -1.09
RRI1YDL216C GAR1P28007 205 aaKnown RBP8.23□□□□□ -1.09
RRI1YDL216C IXR1P33417 597 aa8.22□□□□□ -1.09
RRI1YDL216C RAD59Q12223 238 aa8.22□□□□□ -1.09
RRI1YDL216C ARG8P18544 423 aa8.21□□□□□ -1.1
RRI1YDL216C YJR115WP47152 169 aa8.21□□□□□ -1.1
RRI1YDL216C ENV9Q08651 330 aa8.2□□□□□ -1.1
RRI1YDL216C MSB3P48566 633 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms