RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W ESL2P36168 1195 aa8.8□□□□□ -1
NUP84YDL116W DJP1P40564 432 aa8.8□□□□□ -1
NUP84YDL116W CDC45Q08032 650 aa8.8□□□□□ -1
NUP84YDL116W CAB3P36076 571 aa8.8□□□□□ -1
NUP84YDL116W VPS27P40343 622 aaKnown RBP8.8□□□□□ -1
NUP84YDL116W TAF8Q03750 510 aa8.79□□□□□ -1
NUP84YDL116W MLP1Q02455 1875 aaKnown RBP8.79□□□□□ -1
NUP84YDL116W FPR3P38911 411 aaKnown RBP8.79□□□□□ -1
NUP84YDL116W IML1P47170 1584 aa8.78□□□□□ -1
NUP84YDL116W EBP2P36049 427 aaKnown RBP8.78□□□□□ -1
NUP84YDL116W CHZ1P40019 153 aaPredicted RBP8.78□□□□□ -1
NUP84YDL116W TYS1P36421 394 aaKnown RBP8.78□□□□□ -1
NUP84YDL116W RAD9P14737 1309 aa8.77□□□□□ -1.01
NUP84YDL116W DNF2Q12675 1612 aa8.77□□□□□ -1.01
NUP84YDL116W ABP1P15891 592 aaKnown RBP8.77□□□□□ -1.01
NUP84YDL116W YRB30P53107 440 aaPredicted RBP8.76□□□□□ -1.01
NUP84YDL116W DAL5P15365 543 aa8.76□□□□□ -1.01
NUP84YDL116W RPN1P38764 993 aaKnown RBP8.76□□□□□ -1.01
NUP84YDL116W EAF7P53911 425 aaKnown RBP8.76□□□□□ -1.01
NUP84YDL116W SEC7P11075 2009 aaKnown RBP8.74□□□□□ -1.01
NUP84YDL116W RRP46P53256 223 aaPredicted RBP8.73□□□□□ -1.01
NUP84YDL116W CAB1Q04430 367 aa8.72□□□□□ -1.01
NUP84YDL116W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01not detected
NUP84YDL116W NUP188P52593 1655 aaKnown RBP8.71□□□□□ -1.01
NUP84YDL116W CSE4P36012 229 aa8.71□□□□□ -1.01
NUP84YDL116W YAH1Q12184 172 aaKnown RBP8.71□□□□□ -1.01
NUP84YDL116W OXP1P28273 1286 aa8.71□□□□□ -1.02
NUP84YDL116W SAP155P43612 1002 aa8.71□□□□□ -1.02
NUP84YDL116W TPD3P31383 635 aa8.7□□□□□ -1.02
NUP84YDL116W SNF2P22082 1703 aa8.69□□□□□ -1.02
NUP84YDL116W RTR1P40084 226 aaPredicted RBP8.68□□□□□ -1.02
NUP84YDL116W FKH1P40466 484 aa8.68□□□□□ -1.02
NUP84YDL116W RLF2Q12495 606 aa8.68□□□□□ -1.02
NUP84YDL116W RPP0P05317 312 aaKnown RBP8.67□□□□□ -1.02
NUP84YDL116W YML133CQ03099 1374 aa8.66□□□□□ -1.02
NUP84YDL116W YLL067CQ07888 1374 aa8.66□□□□□ -1.02
NUP84YDL116W YLL066CQ99208 1374 aa8.66□□□□□ -1.02
NUP84YDL116W PCT1P13259 424 aa8.65□□□□□ -1.02
NUP84YDL116W YLR271WQ06152 274 aa8.65□□□□□ -1.02
NUP84YDL116W SNF7P39929 240 aaKnown RBP8.64□□□□□ -1.03
NUP84YDL116W PAP2P53632 584 aaKnown RBP8.64□□□□□ -1.03
NUP84YDL116W THI22Q06490 572 aa8.64□□□□□ -1.03
NUP84YDL116W HIM1Q06674 414 aa8.64□□□□□ -1.03
NUP84YDL116W POL32P47110 350 aa8.63□□□□□ -1.03
NUP84YDL116W YIL092WP40497 633 aa8.62□□□□□ -1.03
NUP84YDL116W MET5P47169 1442 aa8.62□□□□□ -1.03
NUP84YDL116W PUF6Q04373 656 aaKnown RBP8.62□□□□□ -1.03
NUP84YDL116W RAD2P07276 1031 aa8.61□□□□□ -1.03
NUP84YDL116W SLN1P39928 1220 aaPredicted RBP8.61□□□□□ -1.03
NUP84YDL116W ALD4P46367 519 aaKnown RBP8.61□□□□□ -1.03
NUP84YDL116W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
NUP84YDL116W ROX1P25042 368 aa8.61□□□□□ -1.03
NUP84YDL116W RTT109Q07794 436 aa8.61□□□□□ -1.03
NUP84YDL116W RCM1P53972 490 aa8.6□□□□□ -1.03
NUP84YDL116W ILV3P39522 585 aaKnown RBP8.59□□□□□ -1.03
NUP84YDL116W KAR2P16474 682 aaKnown RBP8.59□□□□□ -1.03
NUP84YDL116W BCK1Q01389 1478 aa8.58□□□□□ -1.04
NUP84YDL116W PPH3P32345 308 aa8.58□□□□□ -1.04
NUP84YDL116W IPL1P38991 367 aa8.58□□□□□ -1.04
NUP84YDL116W YGL081WP53156 320 aa8.58□□□□□ -1.04
NUP84YDL116W MGA2P40578 1113 aa8.57□□□□□ -1.04
NUP84YDL116W PRD1P25375 712 aa8.56□□□□□ -1.04
NUP84YDL116W KRE5P22023 1365 aa8.56□□□□□ -1.04
NUP84YDL116W YIR014WP40570 242 aa8.56□□□□□ -1.04
NUP84YDL116W HEF3P53978 1044 aaKnown RBP8.56□□□□□ -1.04
NUP84YDL116W IOC4Q04213 475 aa8.56□□□□□ -1.04
NUP84YDL116W YBR287WP38355 427 aa8.55□□□□□ -1.04
NUP84YDL116W HAP1P0CE41 1502 aa8.54□□□□□ -1.04
NUP84YDL116W PRI1P10363 409 aa8.54□□□□□ -1.04
NUP84YDL116W GAS4Q08271 471 aa8.52□□□□□ -1.04
NUP84YDL116W TRP5P00931 707 aaKnown RBP8.52□□□□□ -1.05
NUP84YDL116W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.52□□□□□ -1.05not detected
NUP84YDL116W YIL055CP40523 627 aaKnown RBP8.51□□□□□ -1.05
NUP84YDL116W KNS1P32350 737 aaPredicted RBP8.51□□□□□ -1.05
NUP84YDL116W MSP1P28737 362 aa8.5□□□□□ -1.05
NUP84YDL116W TRM3Q07527 1436 aa8.5□□□□□ -1.05
NUP84YDL116W AUS1Q08409 1394 aa8.5□□□□□ -1.05
NUP84YDL116W ARL1P38116 183 aaKnown RBP8.49□□□□□ -1.05
NUP84YDL116W RIA1P53893 1110 aa8.49□□□□□ -1.05
NUP84YDL116W VPS24P36095 224 aaKnown RBP8.48□□□□□ -1.05
NUP84YDL116W SPB4P25808 606 aaPredicted RBP8.47□□□□□ -1.05
NUP84YDL116W MNN4P36044 1178 aa8.47□□□□□ -1.05
NUP84YDL116W CTR9P89105 1077 aa8.47□□□□□ -1.05
NUP84YDL116W CST9Q06032 482 aa8.47□□□□□ -1.05
NUP84YDL116W YPP1P46951 817 aa8.46□□□□□ -1.05
NUP84YDL116W ITT1Q04638 464 aa8.46□□□□□ -1.05
NUP84YDL116W RPS24AP0CX31 135 aaKnown RBP8.45□□□□□ -1.06
NUP84YDL116W RPS24BP0CX32 135 aaKnown RBP8.45□□□□□ -1.06
NUP84YDL116W MRX12P47084 519 aa8.45□□□□□ -1.06
NUP84YDL116W TEA1P47988 759 aa8.45□□□□□ -1.06
NUP84YDL116W RRT14P40470 206 aa8.44□□□□□ -1.06
NUP84YDL116W ITC1P53125 1264 aa8.44□□□□□ -1.06
NUP84YDL116W YGR122WP53272 402 aa8.44□□□□□ -1.06
NUP84YDL116W NKP2Q06162 153 aa8.44□□□□□ -1.06
NUP84YDL116W DNF3Q12674 1656 aa8.43□□□□□ -1.06
NUP84YDL116W NAP1P25293 417 aaKnown RBP8.43□□□□□ -1.06
NUP84YDL116W TCB2P48231 1178 aa8.43□□□□□ -1.06
NUP84YDL116W BUD27P43573 796 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
NUP84YDL116W SPO1P53541 631 aa8.42□□□□□ -1.06
NUP84YDL116W TY1B-NL2Q99337 1749 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms