RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C TY1A-AP0CX57 440 aa6.78□□□□□ -1.32
RRP42YDL111C TY1A-PR1P0CX58 440 aa6.78□□□□□ -1.32
RRP42YDL111C TY1A-ORP0CX59 440 aa6.78□□□□□ -1.32
RRP42YDL111C TY1A-PR2P0CX60 440 aa6.78□□□□□ -1.32
RRP42YDL111C TY1A-DR5P0CX65 440 aa6.78□□□□□ -1.32
RRP42YDL111C TY1A-ER2P0CX66 440 aa6.78□□□□□ -1.32
RRP42YDL111C TY1A-GR3P0CX67 440 aa6.78□□□□□ -1.32
RRP42YDL111C TY1A-LR1P0CX68 440 aa6.78□□□□□ -1.32
RRP42YDL111C TY1A-MR2P0CX69 440 aa6.78□□□□□ -1.32
RRP42YDL111C TY1A-JR2P47099 440 aa6.78□□□□□ -1.32
RRP42YDL111C TY1A-DR1Q03856 440 aa6.78□□□□□ -1.32
RRP42YDL111C TY1A-ML1Q04706 440 aaKnown RBP6.78□□□□□ -1.32
RRP42YDL111C TY1A-BRQ12217 440 aa6.78□□□□□ -1.32
RRP42YDL111C TY1A-NL2Q12470 440 aa6.78□□□□□ -1.32
RRP42YDL111C TY1A-GR2Q12485 440 aa6.78□□□□□ -1.32
RRP42YDL111C SEC2P17065 759 aa6.76□□□□□ -1.33
RRP42YDL111C RRN7P40992 514 aa6.76□□□□□ -1.33
RRP42YDL111C BDP1P46678 594 aa6.74□□□□□ -1.33
RRP42YDL111C CDC4P07834 779 aa6.72□□□□□ -1.33
RRP42YDL111C DMA1P38823 416 aa6.72□□□□□ -1.33
RRP42YDL111C MVP1P40959 511 aaKnown RBP6.72□□□□□ -1.33
RRP42YDL111C CKB1P43639 278 aa6.7□□□□□ -1.34
RRP42YDL111C PAT1P25644 796 aaKnown RBP6.69□□□□□ -1.34
RRP42YDL111C MET22P32179 357 aa6.69□□□□□ -1.34
RRP42YDL111C RGR1P19263 1082 aa6.68□□□□□ -1.34
RRP42YDL111C YPR109WQ06104 294 aa6.67□□□□□ -1.34
RRP42YDL111C SAS10Q12136 610 aaPredicted RBP6.66□□□□□ -1.34
RRP42YDL111C PBS2P08018 668 aa6.65□□□□□ -1.34
RRP42YDL111C ENV9Q08651 330 aa6.65□□□□□ -1.34
RRP42YDL111C KEX2P13134 814 aa6.64□□□□□ -1.35
RRP42YDL111C HED1Q03937 162 aa6.64□□□□□ -1.35
RRP42YDL111C YDR444WQ04093 687 aa6.63□□□□□ -1.35
RRP42YDL111C ERF2Q06551 359 aa6.62□□□□□ -1.35
RRP42YDL111C PSE1P32337 1089 aaKnown RBP6.6□□□□□ -1.35
RRP42YDL111C ASH1P34233 588 aa6.59□□□□□ -1.35
RRP42YDL111C MET32Q12041 191 aa6.58□□□□□ -1.36
RRP42YDL111C DSF2P38213 736 aa6.57□□□□□ -1.36
RRP42YDL111C PAC1P39946 494 aaKnown RBP6.57□□□□□ -1.36
RRP42YDL111C HST3P53687 447 aa6.57□□□□□ -1.36
RRP42YDL111C PUS5Q06244 254 aa6.57□□□□□ -1.36
RRP42YDL111C CLB5P30283 435 aa6.56□□□□□ -1.36
RRP42YDL111C MAM3Q12296 706 aa6.56□□□□□ -1.36
RRP42YDL111C LCB5Q06147 687 aaKnown RBP6.54□□□□□ -1.36
RRP42YDL111C AFT1P22149 690 aa6.52□□□□□ -1.37
RRP42YDL111C IES2P40154 320 aa6.51□□□□□ -1.37
RRP42YDL111C TAF7Q05021 590 aa6.51□□□□□ -1.37
RRP42YDL111C NUP42P49686 430 aaKnown RBP6.5□□□□□ -1.37
RRP42YDL111C RTF1P53064 558 aa6.5□□□□□ -1.37
RRP42YDL111C YDL176WQ12027 708 aa6.5□□□□□ -1.37
RRP42YDL111C MOD5P07884 428 aa6.49□□□□□ -1.37
RRP42YDL111C TUB4P53378 473 aa6.49□□□□□ -1.37
RRP42YDL111C SPB4P25808 606 aaPredicted RBP6.48□□□□□ -1.37
RRP42YDL111C RRD1P40454 393 aaKnown RBP6.48□□□□□ -1.37
RRP42YDL111C AGE1Q04412 482 aa6.48□□□□□ -1.37
RRP42YDL111C YJR115WP47152 169 aa6.47□□□□□ -1.37
RRP42YDL111C SIT4P20604 311 aa6.46□□□□□ -1.38
RRP42YDL111C YNL115CP53925 644 aa6.46□□□□□ -1.38
RRP42YDL111C DIT2P21595 489 aa6.44□□□□□ -1.38
RRP42YDL111C TEA1P47988 759 aa6.44□□□□□ -1.38
RRP42YDL111C LEO1P38439 464 aa6.41□□□□□ -1.38
RRP42YDL111C CAF120P53836 1060 aa6.41□□□□□ -1.38
RRP42YDL111C NIS1P53939 407 aa6.4□□□□□ -1.38
RRP42YDL111C TPD3P31383 635 aa6.38□□□□□ -1.39
RRP42YDL111C KXD1P53158 218 aa6.38□□□□□ -1.39
RRP42YDL111C UGA3P26370 528 aa6.36□□□□□ -1.39
RRP42YDL111C MSB3P48566 633 aaPredicted RBP6.35□□□□□ -1.39
RRP42YDL111C SYH1Q02875 849 aaKnown RBP6.35□□□□□ -1.39
RRP42YDL111C SRF1Q12516 437 aa6.35□□□□□ -1.39
RRP42YDL111C HXT10P43581 546 aa6.34□□□□□ -1.39
RRP42YDL111C FPK1P53739 893 aa6.34□□□□□ -1.39
RRP42YDL111C SLY41P22215 453 aa6.33□□□□□ -1.4
RRP42YDL111C YMR196WQ04336 1088 aa6.33□□□□□ -1.4
RRP42YDL111C PDC1P06169 563 aaKnown RBP6.32□□□□□ -1.4
RRP42YDL111C PTK2P47116 818 aaKnown RBP6.32□□□□□ -1.4
RRP42YDL111C OPT2Q06593 877 aa6.32□□□□□ -1.4
RRP42YDL111C KIP2P28743 706 aa6.3□□□□□ -1.4
RRP42YDL111C RPA14P50106 137 aa6.29□□□□□ -1.4
RRP42YDL111C PUS6P53294 404 aa6.29□□□□□ -1.4
RRP42YDL111C YNR021WP53723 404 aaKnown RBP6.29□□□□□ -1.4
RRP42YDL111C ACO2P39533 789 aa6.28□□□□□ -1.4
RRP42YDL111C YGR035CP53222 116 aa6.28□□□□□ -1.4
RRP42YDL111C ATF2P53296 535 aa6.28□□□□□ -1.4
RRP42YDL111C HST2P53686 357 aa6.28□□□□□ -1.4
RRP42YDL111C MTC5Q03897 1148 aa6.28□□□□□ -1.4
RRP42YDL111C YLR346CQ06139 101 aa6.28□□□□□ -1.4
RRP42YDL111C ALR1Q08269 859 aa6.28□□□□□ -1.4
RRP42YDL111C TYW1Q08960 810 aaKnown RBP6.28□□□□□ -1.4
RRP42YDL111C LEU3P08638 886 aa6.27□□□□□ -1.41
RRP42YDL111C TBF1Q02457 562 aa6.27□□□□□ -1.41
RRP42YDL111C YPR097WQ06839 1073 aa6.27□□□□□ -1.41
RRP42YDL111C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
RRP42YDL111C YDL206WQ12424 762 aa6.26□□□□□ -1.41
RRP42YDL111C SCJ1P25303 377 aa6.25□□□□□ -1.41
RRP42YDL111C TRK2P28584 889 aa6.25□□□□□ -1.41
RRP42YDL111C IXR1P33417 597 aa6.24□□□□□ -1.41
RRP42YDL111C YIR007WP40566 764 aa6.24□□□□□ -1.41
RRP42YDL111C TRM1P15565 570 aaKnown RBP6.23□□□□□ -1.41
RRP42YDL111C GLC3P32775 704 aa6.23□□□□□ -1.41
RRP42YDL111C MMP1Q12372 583 aa6.23□□□□□ -1.41
RRP42YDL111C SCW11P53189 542 aa6.22□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 177.3 ms