RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C TY1A-DR4O74302 440 aa6.91□□□□□ -1.3
ASM4YDL088C TY1A-HP0C2I4 478 aaKnown RBP6.91□□□□□ -1.3
ASM4YDL088C TY1A-AP0CX57 440 aa6.91□□□□□ -1.3
ASM4YDL088C TY1A-PR1P0CX58 440 aa6.91□□□□□ -1.3
ASM4YDL088C TY1A-ORP0CX59 440 aa6.91□□□□□ -1.3
ASM4YDL088C TY1A-PR2P0CX60 440 aa6.91□□□□□ -1.3
ASM4YDL088C TY1A-DR5P0CX65 440 aa6.91□□□□□ -1.3
ASM4YDL088C TY1A-ER2P0CX66 440 aa6.91□□□□□ -1.3
ASM4YDL088C TY1A-GR3P0CX67 440 aa6.91□□□□□ -1.3
ASM4YDL088C TY1A-LR1P0CX68 440 aa6.91□□□□□ -1.3
ASM4YDL088C TY1A-MR2P0CX69 440 aa6.91□□□□□ -1.3
ASM4YDL088C SDH2P21801 266 aa6.91□□□□□ -1.3
ASM4YDL088C PAT1P25644 796 aaKnown RBP6.91□□□□□ -1.3
ASM4YDL088C TY1A-JR2P47099 440 aa6.91□□□□□ -1.3
ASM4YDL088C TY1A-DR1Q03856 440 aa6.91□□□□□ -1.3
ASM4YDL088C TY1A-ML1Q04706 440 aaKnown RBP6.91□□□□□ -1.3
ASM4YDL088C TY1A-BRQ12217 440 aa6.91□□□□□ -1.3
ASM4YDL088C TY1A-NL2Q12470 440 aa6.91□□□□□ -1.3
ASM4YDL088C TY1A-GR2Q12485 440 aa6.91□□□□□ -1.3
ASM4YDL088C SEC2P17065 759 aa6.89□□□□□ -1.31
ASM4YDL088C RRN7P40992 514 aa6.89□□□□□ -1.31
ASM4YDL088C ERF2Q06551 359 aa6.87□□□□□ -1.31
ASM4YDL088C ATF2P53296 535 aa6.84□□□□□ -1.31
ASM4YDL088C SRC1Q03707 834 aa6.84□□□□□ -1.31
ASM4YDL088C YNL115CP53925 644 aa6.82□□□□□ -1.32
ASM4YDL088C YMR196WQ04336 1088 aa6.82□□□□□ -1.32
ASM4YDL088C RTF1P53064 558 aa6.82□□□□□ -1.32
ASM4YDL088C NIS1P53939 407 aa6.82□□□□□ -1.32
ASM4YDL088C FRK1Q03002 865 aaPredicted RBP6.82□□□□□ -1.32
ASM4YDL088C CST6P40535 587 aa6.81□□□□□ -1.32
ASM4YDL088C TRK1P12685 1235 aa6.79□□□□□ -1.32
ASM4YDL088C YNR021WP53723 404 aaKnown RBP6.79□□□□□ -1.32
ASM4YDL088C SIT4P20604 311 aa6.78□□□□□ -1.32
ASM4YDL088C GLC3P32775 704 aa6.78□□□□□ -1.32
ASM4YDL088C TUB4P53378 473 aa6.78□□□□□ -1.32
ASM4YDL088C FPK1P53739 893 aa6.78□□□□□ -1.32
ASM4YDL088C SLY41P22215 453 aa6.77□□□□□ -1.33
ASM4YDL088C PAC1P39946 494 aaKnown RBP6.77□□□□□ -1.33
ASM4YDL088C BDP1P46678 594 aa6.77□□□□□ -1.33
ASM4YDL088C LAM6Q08001 693 aa6.77□□□□□ -1.33
ASM4YDL088C AGE1Q04412 482 aa6.74□□□□□ -1.33
ASM4YDL088C AIR1P40507 360 aaKnown RBP6.72□□□□□ -1.33
ASM4YDL088C CLA4P48562 842 aa6.72□□□□□ -1.33
ASM4YDL088C SCJ1P25303 377 aa6.71□□□□□ -1.34
ASM4YDL088C KXD1P53158 218 aa6.71□□□□□ -1.34
ASM4YDL088C TBF1Q02457 562 aa6.71□□□□□ -1.34
ASM4YDL088C MMP1Q12372 583 aa6.7□□□□□ -1.34
ASM4YDL088C HST2P53686 357 aa6.69□□□□□ -1.34
ASM4YDL088C GLN1P32288 370 aaKnown RBP6.69□□□□□ -1.34
ASM4YDL088C PUS6P53294 404 aa6.68□□□□□ -1.34
ASM4YDL088C HED1Q03937 162 aa6.68□□□□□ -1.34
ASM4YDL088C PUS5Q06244 254 aa6.68□□□□□ -1.34
ASM4YDL088C AIM7Q12156 149 aa6.68□□□□□ -1.34
ASM4YDL088C MOD5P07884 428 aa6.67□□□□□ -1.34
ASM4YDL088C CDC4P07834 779 aa6.66□□□□□ -1.34
ASM4YDL088C ESS1P22696 170 aa6.65□□□□□ -1.34
ASM4YDL088C TYW1Q08960 810 aaKnown RBP6.65□□□□□ -1.34
ASM4YDL088C GCR2Q01722 534 aa6.65□□□□□ -1.35
ASM4YDL088C YDL206WQ12424 762 aa6.65□□□□□ -1.35
ASM4YDL088C TRM1P15565 570 aaKnown RBP6.64□□□□□ -1.35
ASM4YDL088C BRE2P43132 505 aa6.64□□□□□ -1.35
ASM4YDL088C HXT10P43581 546 aa6.64□□□□□ -1.35
ASM4YDL088C ALR1Q08269 859 aa6.64□□□□□ -1.35
ASM4YDL088C PDC1P06169 563 aaKnown RBP6.63□□□□□ -1.35
ASM4YDL088C LEU3P08638 886 aa6.62□□□□□ -1.35
ASM4YDL088C RPA14P50106 137 aa6.62□□□□□ -1.35
ASM4YDL088C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
ASM4YDL088C RRD1P40454 393 aaKnown RBP6.61□□□□□ -1.35
ASM4YDL088C CSN12P47130 423 aa6.61□□□□□ -1.35
ASM4YDL088C PKH3Q03306 898 aaPredicted RBP6.61□□□□□ -1.35
ASM4YDL088C YJU3P28321 313 aa6.6□□□□□ -1.35
ASM4YDL088C TPD3P31383 635 aa6.6□□□□□ -1.35
ASM4YDL088C HST3P53687 447 aa6.6□□□□□ -1.35
ASM4YDL088C KIP2P28743 706 aa6.59□□□□□ -1.35
ASM4YDL088C SYH1Q02875 849 aaKnown RBP6.59□□□□□ -1.35
ASM4YDL088C YPR097WQ06839 1073 aa6.59□□□□□ -1.35
ASM4YDL088C MET32Q12041 191 aa6.58□□□□□ -1.36
ASM4YDL088C KIN1P13185 1064 aa6.57□□□□□ -1.36
ASM4YDL088C ARG8P18544 423 aa6.57□□□□□ -1.36
ASM4YDL088C ASH1P34233 588 aa6.57□□□□□ -1.36
ASM4YDL088C KTR1P27810 393 aaKnown RBP6.57□□□□□ -1.36
ASM4YDL088C RPN1P38764 993 aaKnown RBP6.56□□□□□ -1.36
ASM4YDL088C IXR1P33417 597 aa6.55□□□□□ -1.36
ASM4YDL088C AFT1P22149 690 aa6.54□□□□□ -1.36
ASM4YDL088C GBP2P25555 427 aaKnown RBP RIP-Chip data6.52□□□□□ -1.36not detected
ASM4YDL088C SSA2P10592 639 aaKnown RBP6.52□□□□□ -1.37
ASM4YDL088C GAR1P28007 205 aaKnown RBP6.52□□□□□ -1.37
ASM4YDL088C RSC30P38781 883 aa6.51□□□□□ -1.37
ASM4YDL088C RAD59Q12223 238 aa6.5□□□□□ -1.37
ASM4YDL088C UGA3P26370 528 aa6.48□□□□□ -1.37
ASM4YDL088C YJR115WP47152 169 aa6.47□□□□□ -1.37
ASM4YDL088C RGA2Q06407 1009 aa6.47□□□□□ -1.37
ASM4YDL088C VAC17P25591 423 aa6.46□□□□□ -1.38
ASM4YDL088C MET22P32179 357 aa6.45□□□□□ -1.38
ASM4YDL088C MSB3P48566 633 aaPredicted RBP6.45□□□□□ -1.38
ASM4YDL088C SRF1Q12516 437 aa6.45□□□□□ -1.38
ASM4YDL088C GUA1P38625 525 aaKnown RBP6.44□□□□□ -1.38
ASM4YDL088C YDR444WQ04093 687 aa6.43□□□□□ -1.38
ASM4YDL088C ENV9Q08651 330 aa6.43□□□□□ -1.38
ASM4YDL088C MRT4P33201 236 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms