RNA–Protein interactions for RNA: YBR288C

APM3, Transcript of Mu3-like subunit of the clathrin associated protein complex (AP-3), yeastyeast

Gene APM3, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APM3YBR288C TY1A-GR3P0CX67 440 aa8.59□□□□□ -1.03
APM3YBR288C TY1A-LR1P0CX68 440 aa8.59□□□□□ -1.03
APM3YBR288C TY1A-MR2P0CX69 440 aa8.59□□□□□ -1.03
APM3YBR288C TY1A-JR2P47099 440 aa8.59□□□□□ -1.03
APM3YBR288C TEA1P47988 759 aa8.59□□□□□ -1.03
APM3YBR288C TY1A-DR1Q03856 440 aa8.59□□□□□ -1.03
APM3YBR288C TY1A-ML1Q04706 440 aaKnown RBP8.59□□□□□ -1.03
APM3YBR288C TY1A-BRQ12217 440 aa8.59□□□□□ -1.03
APM3YBR288C TY1A-NL2Q12470 440 aa8.59□□□□□ -1.03
APM3YBR288C TY1A-GR2Q12485 440 aa8.59□□□□□ -1.03
APM3YBR288C SEC2P17065 759 aa8.58□□□□□ -1.04
APM3YBR288C KEX2P13134 814 aa8.57□□□□□ -1.04
APM3YBR288C SDH2P21801 266 aa8.57□□□□□ -1.04
APM3YBR288C ERF2Q06551 359 aa8.57□□□□□ -1.04
APM3YBR288C RAS1P01119 309 aa8.54□□□□□ -1.04
APM3YBR288C YNR021WP53723 404 aaKnown RBP8.53□□□□□ -1.04
APM3YBR288C MRF1P30775 413 aaPredicted RBP8.52□□□□□ -1.05
APM3YBR288C GLC3P32775 704 aa8.52□□□□□ -1.05
APM3YBR288C ATF2P53296 535 aa8.52□□□□□ -1.05
APM3YBR288C NIS1P53939 407 aa8.52□□□□□ -1.05
APM3YBR288C AMS1P22855 1083 aa8.5□□□□□ -1.05
APM3YBR288C SPT16P32558 1035 aaKnown RBP8.5□□□□□ -1.05
APM3YBR288C RRN7P40992 514 aa8.5□□□□□ -1.05
APM3YBR288C SIT4P20604 311 aa8.48□□□□□ -1.05
APM3YBR288C YEL077CQ3E7X8 1277 aa8.48□□□□□ -1.05
APM3YBR288C ERG12P07277 443 aa8.47□□□□□ -1.05
APM3YBR288C YNL115CP53925 644 aa8.47□□□□□ -1.05
APM3YBR288C RTF1P53064 558 aa8.45□□□□□ -1.06
APM3YBR288C FPK1P53739 893 aa8.45□□□□□ -1.06
APM3YBR288C PAT1P25644 796 aaKnown RBP8.45□□□□□ -1.06
APM3YBR288C YMR196WQ04336 1088 aa8.45□□□□□ -1.06
APM3YBR288C LEU3P08638 886 aa8.43□□□□□ -1.06
APM3YBR288C TUB4P53378 473 aa8.42□□□□□ -1.06
APM3YBR288C AGE1Q04412 482 aa8.42□□□□□ -1.06
APM3YBR288C PAC1P39946 494 aaKnown RBP8.41□□□□□ -1.06
APM3YBR288C CST6P40535 587 aa8.41□□□□□ -1.06
APM3YBR288C SRC1Q03707 834 aa8.41□□□□□ -1.06
APM3YBR288C AIM7Q12156 149 aa8.4□□□□□ -1.06
APM3YBR288C SLY41P22215 453 aa8.39□□□□□ -1.07
APM3YBR288C SCJ1P25303 377 aa8.39□□□□□ -1.07
APM3YBR288C HST2P53686 357 aa8.37□□□□□ -1.07
APM3YBR288C FRK1Q03002 865 aaPredicted RBP8.37□□□□□ -1.07
APM3YBR288C LAM6Q08001 693 aa8.36□□□□□ -1.07
APM3YBR288C BDP1P46678 594 aa8.35□□□□□ -1.07
APM3YBR288C MMP1Q12372 583 aa8.35□□□□□ -1.07
APM3YBR288C GLN1P32288 370 aaKnown RBP8.33□□□□□ -1.08
APM3YBR288C TYW1Q08960 810 aaKnown RBP8.33□□□□□ -1.08
APM3YBR288C MOD5P07884 428 aa8.31□□□□□ -1.08
APM3YBR288C ESS1P22696 170 aa8.31□□□□□ -1.08
APM3YBR288C CLA4P48562 842 aa8.31□□□□□ -1.08
APM3YBR288C RPN1P38764 993 aaKnown RBP8.3□□□□□ -1.08
APM3YBR288C TRK1P12685 1235 aa8.29□□□□□ -1.08
APM3YBR288C KIN1P13185 1064 aa8.29□□□□□ -1.08
APM3YBR288C PUS6P53294 404 aa8.29□□□□□ -1.08
APM3YBR288C KTR1P27810 393 aaKnown RBP8.28□□□□□ -1.08
APM3YBR288C TRM1P15565 570 aaKnown RBP8.27□□□□□ -1.09
APM3YBR288C AIR1P40507 360 aaKnown RBP8.27□□□□□ -1.09
APM3YBR288C CSN12P47130 423 aa8.27□□□□□ -1.09
APM3YBR288C KXD1P53158 218 aa8.27□□□□□ -1.09
APM3YBR288C TBF1Q02457 562 aa8.27□□□□□ -1.09
APM3YBR288C YJU3P28321 313 aa8.26□□□□□ -1.09
APM3YBR288C PDC1P06169 563 aaKnown RBP8.25□□□□□ -1.09
APM3YBR288C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
APM3YBR288C PUS5Q06244 254 aa8.25□□□□□ -1.09
APM3YBR288C YDL206WQ12424 762 aa8.25□□□□□ -1.09
APM3YBR288C HXT10P43581 546 aa8.23□□□□□ -1.09
APM3YBR288C PKH3Q03306 898 aaPredicted RBP8.23□□□□□ -1.09
APM3YBR288C RPA14P50106 137 aa8.22□□□□□ -1.09
APM3YBR288C HED1Q03937 162 aa8.21□□□□□ -1.09
APM3YBR288C TPD3P31383 635 aa8.2□□□□□ -1.1
APM3YBR288C RRD1P40454 393 aaKnown RBP8.2□□□□□ -1.1
APM3YBR288C YPR097WQ06839 1073 aa8.2□□□□□ -1.1
APM3YBR288C ALR1Q08269 859 aa8.2□□□□□ -1.1
APM3YBR288C CDC4P07834 779 aa8.19□□□□□ -1.1
APM3YBR288C RSC30P38781 883 aa8.19□□□□□ -1.1
APM3YBR288C ARG8P18544 423 aa8.18□□□□□ -1.1
APM3YBR288C GUA1P38625 525 aaKnown RBP8.15□□□□□ -1.1
APM3YBR288C SSA2P10592 639 aaKnown RBP8.13□□□□□ -1.11
APM3YBR288C MET32Q12041 191 aa8.13□□□□□ -1.11
APM3YBR288C RAD59Q12223 238 aa8.13□□□□□ -1.11
APM3YBR288C SYH1Q02875 849 aaKnown RBP8.13□□□□□ -1.11
APM3YBR288C KIP2P28743 706 aa8.1□□□□□ -1.11
APM3YBR288C BRE2P43132 505 aa8.1□□□□□ -1.11
APM3YBR288C ASH1P34233 588 aa8.09□□□□□ -1.11
APM3YBR288C IXR1P33417 597 aa8.08□□□□□ -1.12
APM3YBR288C GCR2Q01722 534 aa8.07□□□□□ -1.12
APM3YBR288C HST3P53687 447 aa8.06□□□□□ -1.12
APM3YBR288C AFT1P22149 690 aa8.05□□□□□ -1.12
APM3YBR288C VAC17P25591 423 aa8.04□□□□□ -1.12
APM3YBR288C HPC2Q01448 625 aa8.02□□□□□ -1.13
APM3YBR288C ITT1Q04638 464 aa8.01□□□□□ -1.13
APM3YBR288C FIG4P42837 879 aa8□□□□□ -1.13
APM3YBR288C TFB3Q03290 321 aa8□□□□□ -1.13
APM3YBR288C MAK16P10962 306 aaPredicted RBP7.98□□□□□ -1.13
APM3YBR288C MRT4P33201 236 aaKnown RBP7.98□□□□□ -1.13
APM3YBR288C BRL1P38770 471 aa7.98□□□□□ -1.13
APM3YBR288C YJR115WP47152 169 aa7.96□□□□□ -1.13
APM3YBR288C TEC1P18412 486 aa7.95□□□□□ -1.14
APM3YBR288C PKC1P24583 1151 aa7.95□□□□□ -1.14
APM3YBR288C UGA3P26370 528 aa7.95□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms