RNA–Protein interactions for RNA: ENST00000641395.1

SAMMSON-214, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-214ENST00000641395 TRIM35Q9UPQ4 493 aa11.6□□□□□ -0.55
SAMMSON-214ENST00000641395 NUBP1P53384 320 aa11.59□□□□□ -0.55
SAMMSON-214ENST00000641395 PRDM2Q13029 1718 aa11.59□□□□□ -0.55
SAMMSON-214ENST00000641395 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.55
SAMMSON-214ENST00000641395 HRCP23327 699 aa11.58□□□□□ -0.56
SAMMSON-214ENST00000641395 FAM212AQ96EL1 285 aa11.56□□□□□ -0.56
SAMMSON-214ENST00000641395 CCDC88BA6NC98 1476 aa11.56□□□□□ -0.56
SAMMSON-214ENST00000641395 SOCS7O14512 581 aa11.55□□□□□ -0.56
SAMMSON-214ENST00000641395 SPOCK2Q92563 424 aa11.55□□□□□ -0.56
SAMMSON-214ENST00000641395 CHMP4AQ9BY43 222 aa11.55□□□□□ -0.56
SAMMSON-214ENST00000641395 NESP48681 1621 aa11.54□□□□□ -0.56
SAMMSON-214ENST00000641395 SUPT5HO00267 1087 aaKnown RBP11.54□□□□□ -0.56
SAMMSON-214ENST00000641395 IFNL1Q8IU54 200 aa11.54□□□□□ -0.56
SAMMSON-214ENST00000641395 KIF21AQ7Z4S6 1674 aa11.52□□□□□ -0.57
SAMMSON-214ENST00000641395 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
SAMMSON-214ENST00000641395 UBTFP17480 764 aaKnown RBP11.5□□□□□ -0.57
SAMMSON-214ENST00000641395 CADPSQ9ULU8 1353 aa11.5□□□□□ -0.57
SAMMSON-214ENST00000641395 CFTRP13569 1480 aa11.49□□□□□ -0.57
SAMMSON-214ENST00000641395 PLCG2P16885 1265 aa11.48□□□□□ -0.57
SAMMSON-214ENST00000641395 PDE4CQ08493 712 aa11.48□□□□□ -0.57
SAMMSON-214ENST00000641395 SLAIN1Q8ND83 568 aa11.47□□□□□ -0.57
SAMMSON-214ENST00000641395 CDK11AQ9UQ88 783 aaPredicted RBP11.46□□□□□ -0.57
SAMMSON-214ENST00000641395 KDM2AQ9Y2K7 1162 aa11.46□□□□□ -0.57
SAMMSON-214ENST00000641395 CDK11BP21127 795 aaKnown RBP11.45□□□□□ -0.58
SAMMSON-214ENST00000641395 LMTK3Q96Q04 1460 aa11.44□□□□□ -0.58
SAMMSON-214ENST00000641395 DCAF8Q5TAQ9 597 aa11.44□□□□□ -0.58
SAMMSON-214ENST00000641395 PDS5BQ9NTI5 1447 aa11.43□□□□□ -0.58
SAMMSON-214ENST00000641395 CDAN1Q8IWY9 1227 aa11.42□□□□□ -0.58
SAMMSON-214ENST00000641395 THOC2Q8NI27 1593 aaKnown RBP11.41□□□□□ -0.58
SAMMSON-214ENST00000641395 NEFLP07196 543 aa11.41□□□□□ -0.58
SAMMSON-214ENST00000641395 BRD2P25440 801 aaKnown RBP11.4□□□□□ -0.58
SAMMSON-214ENST00000641395 IRX5P78411 483 aaPredicted RBP11.4□□□□□ -0.58
SAMMSON-214ENST00000641395 OCEL1Q9H607 264 aa11.39□□□□□ -0.59
SAMMSON-214ENST00000641395 FANCD2Q9BXW9 1451 aa11.38□□□□□ -0.59
SAMMSON-214ENST00000641395 ST18O60284 1047 aa11.38□□□□□ -0.59
SAMMSON-214ENST00000641395 TAF7LQ5H9L4 462 aa11.38□□□□□ -0.59
SAMMSON-214ENST00000641395 CEP164Q9UPV0 1460 aa11.38□□□□□ -0.59
SAMMSON-214ENST00000641395 PYGBP11216 843 aa11.37□□□□□ -0.59
SAMMSON-214ENST00000641395 CYB5RLQ6IPT4 315 aa11.36□□□□□ -0.59
SAMMSON-214ENST00000641395 FBXO41Q8TF61 875 aa11.35□□□□□ -0.59
SAMMSON-214ENST00000641395 MRC2Q9UBG0 1479 aa11.33□□□□□ -0.6
SAMMSON-214ENST00000641395 SNPHO15079 494 aa11.33□□□□□ -0.6
SAMMSON-214ENST00000641395 GSE1Q14687 1217 aa11.33□□□□□ -0.6
SAMMSON-214ENST00000641395 WDR62O43379 1518 aa11.33□□□□□ -0.6
SAMMSON-214ENST00000641395 DHX37Q8IY37 1157 aaKnown RBP11.32□□□□□ -0.6
SAMMSON-214ENST00000641395 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.32□□□□□ -0.6
SAMMSON-214ENST00000641395 PCDHB8Q9UN66 801 aa11.32□□□□□ -0.6
SAMMSON-214ENST00000641395 ILDR2Q71H61 639 aa11.31□□□□□ -0.6
SAMMSON-214ENST00000641395 PKNOX2Q96KN3 472 aa11.31□□□□□ -0.6
SAMMSON-214ENST00000641395 TMEM121BQ9BXQ6 578 aaPredicted RBP11.3□□□□□ -0.6
SAMMSON-214ENST00000641395 HMGB1P09429 215 aaKnown RBP11.29□□□□□ -0.6
SAMMSON-214ENST00000641395 PKD2Q13563 968 aa11.29□□□□□ -0.6
SAMMSON-214ENST00000641395 CIZ1Q9ULV3 898 aaPredicted RBP11.29□□□□□ -0.6
SAMMSON-214ENST00000641395 URB2Q14146 1524 aaKnown RBP11.29□□□□□ -0.6
SAMMSON-214ENST00000641395 HSP90B1P14625 803 aaKnown RBP11.27□□□□□ -0.61
SAMMSON-214ENST00000641395 DNMBPQ6XZF7 1577 aa11.27□□□□□ -0.61
SAMMSON-214ENST00000641395 IGSF3O75054 1194 aa11.26□□□□□ -0.61
SAMMSON-214ENST00000641395 ECM2O94769 699 aaPredicted RBP11.26□□□□□ -0.61
SAMMSON-214ENST00000641395 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
SAMMSON-214ENST00000641395 GOLGA2Q08379 1002 aa11.25□□□□□ -0.61
SAMMSON-214ENST00000641395 ABCC8Q09428 1581 aa11.24□□□□□ -0.61
SAMMSON-214ENST00000641395 RIMBP3CA6NJZ7 1639 aa11.24□□□□□ -0.61
SAMMSON-214ENST00000641395 RIMBP3BA6NNM3 1639 aa11.24□□□□□ -0.61
SAMMSON-214ENST00000641395 RIMBP3Q9UFD9 1639 aa11.24□□□□□ -0.61
SAMMSON-214ENST00000641395 TOPBP1Q92547 1522 aa11.24□□□□□ -0.61
SAMMSON-214ENST00000641395 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
SAMMSON-214ENST00000641395 L3MBTL3Q96JM7 780 aaPredicted RBP11.21□□□□□ -0.61
SAMMSON-214ENST00000641395 BIVM-ERCC5R4GMW8 1640 aa11.2□□□□□ -0.62
SAMMSON-214ENST00000641395 CUX1P39880 1505 aa11.2□□□□□ -0.62
SAMMSON-214ENST00000641395 CHRM1P11229 460 aaPredicted RBP11.2□□□□□ -0.62
SAMMSON-214ENST00000641395 C3orf67Q6ZVT6 689 aa11.19□□□□□ -0.62
SAMMSON-214ENST00000641395 TOP2BQ02880 1626 aa11.18□□□□□ -0.62
SAMMSON-214ENST00000641395 SYNJ1O43426 1573 aa11.17□□□□□ -0.62
SAMMSON-214ENST00000641395 PDCD7Q8N8D1 485 aaKnown RBP11.17□□□□□ -0.62
SAMMSON-214ENST00000641395 BCL11BQ9C0K0 894 aaPredicted RBP11.17□□□□□ -0.62
SAMMSON-214ENST00000641395 CCDC9Q9Y3X0 531 aaKnown RBP11.16□□□□□ -0.62
SAMMSON-214ENST00000641395 POLA1P09884 1462 aaPredicted RBP11.15□□□□□ -0.62
SAMMSON-214ENST00000641395 MARVELD3Q96A59 401 aa11.15□□□□□ -0.62
SAMMSON-214ENST00000641395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.15□□□□□ -0.62
SAMMSON-214ENST00000641395 WDR97A6NE52 1622 aa11.15□□□□□ -0.62
SAMMSON-214ENST00000641395 TARBP1Q13395 1621 aaKnown RBP11.15□□□□□ -0.62
SAMMSON-214ENST00000641395 WRNQ14191 1432 aaPredicted RBP eCLIP11.15□□□□□ -0.62
SAMMSON-214ENST00000641395 FGD5Q6ZNL6 1462 aa11.14□□□□□ -0.63
SAMMSON-214ENST00000641395 SPNS2Q8IVW8 549 aa11.14□□□□□ -0.63
SAMMSON-214ENST00000641395 PUS7Q96PZ0 661 aaKnown RBP11.14□□□□□ -0.63
SAMMSON-214ENST00000641395 PSEN1P49768 467 aa11.13□□□□□ -0.63
SAMMSON-214ENST00000641395 FGD1P98174 961 aa11.13□□□□□ -0.63
SAMMSON-214ENST00000641395 MMRN1Q13201 1228 aa11.13□□□□□ -0.63
SAMMSON-214ENST00000641395 ARHGEF11O15085 1522 aa11.13□□□□□ -0.63
SAMMSON-214ENST00000641395 IFT140Q96RY7 1462 aa11.12□□□□□ -0.63
SAMMSON-214ENST00000641395 DISP3Q9P2K9 1392 aa11.11□□□□□ -0.63
SAMMSON-214ENST00000641395 EIF4G3O43432 1585 aaKnown RBP11.08□□□□□ -0.64
SAMMSON-214ENST00000641395 KDM4FA0A1W2PPD8 638 aa11.08□□□□□ -0.64
SAMMSON-214ENST00000641395 EMP3P54852 163 aa11.08□□□□□ -0.64
SAMMSON-214ENST00000641395 PDAP1Q13442 181 aaKnown RBP11.08□□□□□ -0.64
SAMMSON-214ENST00000641395 RAD54L2Q9Y4B4 1467 aa11.07□□□□□ -0.64
SAMMSON-214ENST00000641395 SOGA1O94964 1423 aa11.07□□□□□ -0.64
SAMMSON-214ENST00000641395 ZNF608Q9ULD9 1512 aaPredicted RBP11.06□□□□□ -0.64
SAMMSON-214ENST00000641395 RGL2O15211 777 aa11.06□□□□□ -0.64
SAMMSON-214ENST00000641395 CENPBP07199 599 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms