RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 HECW1Q76N89 1606 aa25.16■■□□□ 1.62
KCNC1-213ENST00000640909 STRCQ7RTU9 1775 aa25.15■■□□□ 1.62
KCNC1-213ENST00000640909 PLPPR3Q6T4P5 718 aa25.14■■□□□ 1.62
KCNC1-213ENST00000640909 PLEKHD1A6NEE1 506 aa25.11■■□□□ 1.61
KCNC1-213ENST00000640909 C9orf84Q5VXU9 1444 aa25.09■■□□□ 1.61
KCNC1-213ENST00000640909 IQSEC2Q5JU85 1478 aa25.08■■□□□ 1.6
KCNC1-213ENST00000640909 ATP10AO60312 1499 aa25.07■■□□□ 1.6
KCNC1-213ENST00000640909 UHRF1BP1Q6BDS2 1440 aa25.06■■□□□ 1.6
KCNC1-213ENST00000640909 MLECQ14165 292 aa25.05■■□□□ 1.6
KCNC1-213ENST00000640909 PTPRTO14522 1441 aa25.04■■□□□ 1.6
KCNC1-213ENST00000640909 SETD1BQ9UPS6 1966 aaKnown RBP25.04■■□□□ 1.6
KCNC1-213ENST00000640909 SCAPERQ9BY12 1400 aa25.01■■□□□ 1.59
KCNC1-213ENST00000640909 PLCH2O75038 1416 aa24.99■■□□□ 1.59
KCNC1-213ENST00000640909 LTBP4Q8N2S1 1624 aa24.97■■□□□ 1.59
KCNC1-213ENST00000640909 REREQ9P2R6 1566 aa24.95■■□□□ 1.58
KCNC1-213ENST00000640909 MYO5CQ9NQX4 1742 aa24.94■■□□□ 1.58
KCNC1-213ENST00000640909 ZNF518AQ6AHZ1 1483 aa24.93■■□□□ 1.58
KCNC1-213ENST00000640909 KDM5CP41229 1560 aa24.93■■□□□ 1.58
KCNC1-213ENST00000640909 CEBPAP49715 358 aaPredicted RBP24.91■■□□□ 1.58
KCNC1-213ENST00000640909 C3P01024 1663 aa24.91■■□□□ 1.58
KCNC1-213ENST00000640909 DIP2CQ9Y2E4 1556 aa24.85■■□□□ 1.57
KCNC1-213ENST00000640909 EFCAB2Q5VUJ9 269 aa24.85■■□□□ 1.57
KCNC1-213ENST00000640909 CSRNP3Q8WYN3 585 aa24.85■■□□□ 1.57
KCNC1-213ENST00000640909 CDK13Q14004 1512 aaKnown RBP24.85■■□□□ 1.57
KCNC1-213ENST00000640909 NCOA1Q15788 1441 aa24.84■■□□□ 1.57
KCNC1-213ENST00000640909 AGLP35573 1532 aa24.83■■□□□ 1.57
KCNC1-213ENST00000640909 TRAPPC8Q9Y2L5 1435 aa24.82■■□□□ 1.56
KCNC1-213ENST00000640909 KIF14Q15058 1648 aa24.79■■□□□ 1.56
KCNC1-213ENST00000640909 ABCA6Q8N139 1617 aa24.78■■□□□ 1.56
KCNC1-213ENST00000640909 EEA1Q15075 1411 aa24.78■■□□□ 1.56
KCNC1-213ENST00000640909 MLH3Q9UHC1 1453 aa24.77■■□□□ 1.56
KCNC1-213ENST00000640909 CNTLNQ9NXG0 1405 aa24.77■■□□□ 1.56
KCNC1-213ENST00000640909 ARHGAP5Q13017 1502 aa24.75■■□□□ 1.55
KCNC1-213ENST00000640909 MROH2AA6NES4 1674 aa24.72■■□□□ 1.55
KCNC1-213ENST00000640909 NPATQ14207 1427 aa24.72■■□□□ 1.55
KCNC1-213ENST00000640909 ESF1Q9H501 851 aaKnown RBP24.72■■□□□ 1.55
KCNC1-213ENST00000640909 CAMSAP1Q5T5Y3 1602 aa24.72■■□□□ 1.55
KCNC1-213ENST00000640909 RANGAP1P46060 587 aaPredicted RBP24.71■■□□□ 1.55
KCNC1-213ENST00000640909 CDK11AQ9UQ88 783 aaPredicted RBP24.7■■□□□ 1.54
KCNC1-213ENST00000640909 AFAP1Q8N556 730 aa24.69■■□□□ 1.54
KCNC1-213ENST00000640909 FMN1Q68DA7 1419 aa24.68■■□□□ 1.54
KCNC1-213ENST00000640909 TROQ12816 1431 aaPredicted RBP24.66■■□□□ 1.54
KCNC1-213ENST00000640909 ZNF142P52746 1687 aaPredicted RBP24.66■■□□□ 1.54
KCNC1-213ENST00000640909 CLIP1P30622 1438 aa24.65■■□□□ 1.54
KCNC1-213ENST00000640909 ABCC1P33527 1531 aa24.65■■□□□ 1.54
KCNC1-213ENST00000640909 PLA2R1Q13018 1463 aa24.64■■□□□ 1.54
KCNC1-213ENST00000640909 CDC42BPBQ9Y5S2 1711 aa24.64■■□□□ 1.54
KCNC1-213ENST00000640909 MYT1LQ9UL68 1186 aa24.64■■□□□ 1.54
KCNC1-213ENST00000640909 UBAP1LF5GYI3 381 aa24.63■■□□□ 1.53
KCNC1-213ENST00000640909 ITSN2Q9NZM3 1697 aa24.62■■□□□ 1.53
KCNC1-213ENST00000640909 PREX2Q70Z35 1606 aa24.62■■□□□ 1.53
KCNC1-213ENST00000640909 KIDINS220Q9ULH0 1771 aa24.61■■□□□ 1.53
KCNC1-213ENST00000640909 MED1Q15648 1581 aaPredicted RBP24.59■■□□□ 1.53
KCNC1-213ENST00000640909 MYO3AQ8NEV4 1616 aa24.58■■□□□ 1.53
KCNC1-213ENST00000640909 PKD2Q13563 968 aa24.58■■□□□ 1.53
KCNC1-213ENST00000640909 ZNF335Q9H4Z2 1342 aaPredicted RBP24.58■■□□□ 1.52
KCNC1-213ENST00000640909 SUPT6HQ7KZ85 1726 aaKnown RBP24.58■■□□□ 1.52
KCNC1-213ENST00000640909 TCOF1Q13428 1488 aaKnown RBP24.58■■□□□ 1.52
KCNC1-213ENST00000640909 CEP170BQ9Y4F5 1589 aaPredicted RBP24.54■■□□□ 1.52
KCNC1-213ENST00000640909 ZMYM3Q14202 1370 aa24.52■■□□□ 1.52
KCNC1-213ENST00000640909 LRRIQ1Q96JM4 1722 aa24.5■■□□□ 1.51
KCNC1-213ENST00000640909 NCKAP5LQ9HCH0 1330 aa24.5■■□□□ 1.51
KCNC1-213ENST00000640909 ATP1B4Q9UN42 357 aaPredicted RBP24.48■■□□□ 1.51
KCNC1-213ENST00000640909 CLTCQ00610 1675 aaKnown RBP24.47■■□□□ 1.51
KCNC1-213ENST00000640909 ARHGAP35Q9NRY4 1499 aa24.47■■□□□ 1.51
KCNC1-213ENST00000640909 SAMD9LQ8IVG5 1584 aa24.46■■□□□ 1.51
KCNC1-213ENST00000640909 CPS1P31327 1500 aa24.45■■□□□ 1.51
KCNC1-213ENST00000640909 PLXNC1O60486 1568 aa24.45■■□□□ 1.5
KCNC1-213ENST00000640909 CDC42BPAQ5VT25 1732 aa24.44■■□□□ 1.5
KCNC1-213ENST00000640909 PPP6R1Q9UPN7 881 aa24.43■■□□□ 1.5
KCNC1-213ENST00000640909 PTPRKQ15262 1439 aa24.43■■□□□ 1.5
KCNC1-213ENST00000640909 CCDC18Q5T9S5 1454 aa24.42■■□□□ 1.5
KCNC1-213ENST00000640909 HSPA1LP34931 641 aa24.41■■□□□ 1.5
KCNC1-213ENST00000640909 POLR1AO95602 1720 aaPredicted RBP24.4■■□□□ 1.5
KCNC1-213ENST00000640909 TOM1O60784 492 aa24.39■■□□□ 1.49
KCNC1-213ENST00000640909 ATP7AQ04656 1500 aa24.37■■□□□ 1.49
KCNC1-213ENST00000640909 A2ML1A8K2U0 1454 aa24.37■■□□□ 1.49
KCNC1-213ENST00000640909 INO80Q9ULG1 1556 aaPredicted RBP24.37■■□□□ 1.49
KCNC1-213ENST00000640909 DNMT1P26358 1616 aaKnown RBP24.36■■□□□ 1.49
KCNC1-213ENST00000640909 SYCP2Q9BX26 1530 aa24.35■■□□□ 1.49
KCNC1-213ENST00000640909 A2MP01023 1474 aa24.33■■□□□ 1.49
KCNC1-213ENST00000640909 SPAG9O60271 1321 aaKnown RBP24.33■■□□□ 1.48
KCNC1-213ENST00000640909 SCAF1Q9H7N4 1312 aaKnown RBP24.33■■□□□ 1.48
KCNC1-213ENST00000640909 SHANK2Q9UPX8 1470 aa24.32■■□□□ 1.48
KCNC1-213ENST00000640909 NEURL4Q96JN8 1562 aa24.32■■□□□ 1.48
KCNC1-213ENST00000640909 PHF23Q9BUL5 403 aaPredicted RBP24.31■■□□□ 1.48
KCNC1-213ENST00000640909 ADGBQ8N7X0 1667 aa24.3■■□□□ 1.48
KCNC1-213ENST00000640909 KIAA1107Q9UPP5 1409 aa24.3■■□□□ 1.48
KCNC1-213ENST00000640909 PIP4K2BP78356 416 aa24.3■■□□□ 1.48
KCNC1-213ENST00000640909 PLEKHH2Q8IVE3 1493 aa24.29■■□□□ 1.48
KCNC1-213ENST00000640909 CASKIN1Q8WXD9 1431 aa24.28■■□□□ 1.48
KCNC1-213ENST00000640909 UBTFP17480 764 aaKnown RBP24.27■■□□□ 1.48
KCNC1-213ENST00000640909 FAM135AQ9P2D6 1515 aa24.25■■□□□ 1.47
KCNC1-213ENST00000640909 ALKQ9UM73 1620 aa24.24■■□□□ 1.47
KCNC1-213ENST00000640909 VWDEQ8N2E2 1590 aa24.24■■□□□ 1.47
KCNC1-213ENST00000640909 GPATCH8Q9UKJ3 1502 aaKnown RBP24.23■■□□□ 1.47
KCNC1-213ENST00000640909 DEPDC5O75140 1603 aa24.21■■□□□ 1.47
KCNC1-213ENST00000640909 GGT6Q6P531 493 aa24.21■■□□□ 1.47
KCNC1-213ENST00000640909 ZNF777Q9ULD5 760 aaPredicted RBP24.19■■□□□ 1.46
KCNC1-213ENST00000640909 MED14O60244 1454 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms