RNA–Protein interactions for RNA: ENST00000640481.1

NECAP1-226, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,216 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-226ENST00000640481 AKNAQ7Z591 1439 aa9.75□□□□□ -0.85
NECAP1-226ENST00000640481 KDM6BO15054 1643 aa9.74□□□□□ -0.85
NECAP1-226ENST00000640481 ROCK1Q13464 1354 aa9.73□□□□□ -0.85
NECAP1-226ENST00000640481 GCC2Q8IWJ2 1684 aa9.73□□□□□ -0.85
NECAP1-226ENST00000640481 DNMT1P26358 1616 aaKnown RBP9.73□□□□□ -0.85
NECAP1-226ENST00000640481 TONSLQ96HA7 1378 aa9.73□□□□□ -0.85
NECAP1-226ENST00000640481 CAMSAP2Q08AD1 1489 aa9.73□□□□□ -0.85
NECAP1-226ENST00000640481 MPHOSPH9Q99550 1183 aa9.73□□□□□ -0.85
NECAP1-226ENST00000640481 ADCY10Q96PN6 1610 aa9.72□□□□□ -0.85
NECAP1-226ENST00000640481 ERCC6L2Q5T890 1561 aa9.72□□□□□ -0.85
NECAP1-226ENST00000640481 SHROOM2Q13796 1616 aa9.71□□□□□ -0.85
NECAP1-226ENST00000640481 ITSN2Q9NZM3 1697 aa9.71□□□□□ -0.85
NECAP1-226ENST00000640481 MYT1Q01538 1121 aa9.71□□□□□ -0.86
NECAP1-226ENST00000640481 FOXD1Q16676 465 aa9.71□□□□□ -0.86
NECAP1-226ENST00000640481 ABCC10Q5T3U5 1492 aa9.71□□□□□ -0.86
NECAP1-226ENST00000640481 DENND4BO75064 1496 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-226ENST00000640481 NCOA1Q15788 1441 aa9.69□□□□□ -0.86
NECAP1-226ENST00000640481 YTHDC1Q96MU7 727 aaKnown RBP9.69□□□□□ -0.86
NECAP1-226ENST00000640481 HIRIP3Q9BW71 556 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-226ENST00000640481 CDC42BPAQ5VT25 1732 aa9.68□□□□□ -0.86
NECAP1-226ENST00000640481 HNRNPMP52272 730 aaKnown RBP eCLIP9.68□□□□□ -0.86
NECAP1-226ENST00000640481 SLC4A1APQ9BWU0 796 aaKnown RBP9.68□□□□□ -0.86
NECAP1-226ENST00000640481 ACIN1Q9UKV3 1341 aaKnown RBP9.67□□□□□ -0.86
NECAP1-226ENST00000640481 CENPBP07199 599 aaPredicted RBP9.67□□□□□ -0.86
NECAP1-226ENST00000640481 TSPY4P0CV99 314 aa9.67□□□□□ -0.86
NECAP1-226ENST00000640481 TSPY10P0CW01 314 aa9.67□□□□□ -0.86
NECAP1-226ENST00000640481 KCNH8Q96L42 1107 aa9.67□□□□□ -0.86
NECAP1-226ENST00000640481 ANKRD30AQ9BXX3 1397 aa9.66□□□□□ -0.86
NECAP1-226ENST00000640481 CLASP1Q7Z460 1538 aa9.66□□□□□ -0.86
NECAP1-226ENST00000640481 ABCC2Q92887 1545 aa9.65□□□□□ -0.86
NECAP1-226ENST00000640481 ADGRL2O95490 1459 aa9.64□□□□□ -0.87
NECAP1-226ENST00000640481 DDX10Q13206 875 aaKnown RBP9.64□□□□□ -0.87
NECAP1-226ENST00000640481 ANKRD30BQ9BXX2 1392 aa9.64□□□□□ -0.87
NECAP1-226ENST00000640481 SCAF1Q9H7N4 1312 aaKnown RBP9.64□□□□□ -0.87
NECAP1-226ENST00000640481 C9orf84Q5VXU9 1444 aa9.63□□□□□ -0.87
NECAP1-226ENST00000640481 L3MBTL2Q969R5 705 aa9.63□□□□□ -0.87
NECAP1-226ENST00000640481 ANKRD50Q9ULJ7 1429 aa9.63□□□□□ -0.87
NECAP1-226ENST00000640481 CROCC2H7BZ55 1655 aa9.62□□□□□ -0.87
NECAP1-226ENST00000640481 ADGBQ8N7X0 1667 aa9.62□□□□□ -0.87
NECAP1-226ENST00000640481 KDM5BQ9UGL1 1544 aa9.62□□□□□ -0.87
NECAP1-226ENST00000640481 MBD5Q9P267 1494 aa9.62□□□□□ -0.87
NECAP1-226ENST00000640481 CDC42BPBQ9Y5S2 1711 aa9.61□□□□□ -0.87
NECAP1-226ENST00000640481 PZPP20742 1482 aa9.61□□□□□ -0.87
NECAP1-226ENST00000640481 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.61□□□□□ -0.87
NECAP1-226ENST00000640481 RSPH4AQ5TD94 716 aa9.61□□□□□ -0.87
NECAP1-226ENST00000640481 PKD2Q13563 968 aa9.6□□□□□ -0.87
NECAP1-226ENST00000640481 SHANK2Q9UPX8 1470 aa9.6□□□□□ -0.87
NECAP1-226ENST00000640481 TTC37Q6PGP7 1564 aa9.6□□□□□ -0.87
NECAP1-226ENST00000640481 SAMD9LQ8IVG5 1584 aa9.6□□□□□ -0.87
NECAP1-226ENST00000640481 PREX2Q70Z35 1606 aa9.59□□□□□ -0.87
NECAP1-226ENST00000640481 KIF15Q9NS87 1388 aa9.59□□□□□ -0.87
NECAP1-226ENST00000640481 ARHGAP5Q13017 1502 aa9.59□□□□□ -0.87
NECAP1-226ENST00000640481 NUP155O75694 1391 aa9.59□□□□□ -0.87
NECAP1-226ENST00000640481 UHRF1BP1LA0JNW5 1464 aa9.59□□□□□ -0.87
NECAP1-226ENST00000640481 RPRD2Q5VT52 1461 aaKnown RBP9.59□□□□□ -0.87
NECAP1-226ENST00000640481 CCDC141Q6ZP82 1450 aa9.59□□□□□ -0.87
NECAP1-226ENST00000640481 ARHGEF5Q12774 1597 aa9.59□□□□□ -0.87
NECAP1-226ENST00000640481 ZCCHC11Q5TAX3 1644 aaKnown RBP9.58□□□□□ -0.88
NECAP1-226ENST00000640481 KIAA1107Q9UPP5 1409 aa9.57□□□□□ -0.88
NECAP1-226ENST00000640481 SYCP2Q9BX26 1530 aa9.57□□□□□ -0.88
NECAP1-226ENST00000640481 NBPF8Q3BBV2 869 aa9.56□□□□□ -0.88
NECAP1-226ENST00000640481 EFCAB2Q5VUJ9 269 aa9.56□□□□□ -0.88
NECAP1-226ENST00000640481 OSCARQ8IYS5 282 aa9.56□□□□□ -0.88
NECAP1-226ENST00000640481 HSPA5P11021 654 aaKnown RBP9.56□□□□□ -0.88
NECAP1-226ENST00000640481 PLCH2O75038 1416 aa9.56□□□□□ -0.88
NECAP1-226ENST00000640481 EIF4G2P78344 907 aaKnown RBP eCLIP9.55□□□□□ -0.88
NECAP1-226ENST00000640481 GTF3C3Q9Y5Q9 886 aa9.55□□□□□ -0.88
NECAP1-226ENST00000640481 MYO5CQ9NQX4 1742 aa9.55□□□□□ -0.88
NECAP1-226ENST00000640481 TEX14Q8IWB6 1497 aa9.54□□□□□ -0.88
NECAP1-226ENST00000640481 PLEKHH2Q8IVE3 1493 aa9.53□□□□□ -0.88
NECAP1-226ENST00000640481 ARHGEF12Q9NZN5 1544 aa9.53□□□□□ -0.88
NECAP1-226ENST00000640481 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.52□□□□□ -0.88
NECAP1-226ENST00000640481 ZNF326Q5BKZ1 582 aaKnown RBP9.51□□□□□ -0.89
NECAP1-226ENST00000640481 ANP32CO43423 234 aa9.51□□□□□ -0.89
NECAP1-226ENST00000640481 KDM5DQ9BY66 1539 aa9.51□□□□□ -0.89
NECAP1-226ENST00000640481 AFAP1Q8N556 730 aa9.5□□□□□ -0.89
NECAP1-226ENST00000640481 WASHC2AQ641Q2 1341 aa9.5□□□□□ -0.89
NECAP1-226ENST00000640481 TRAPPC8Q9Y2L5 1435 aa9.5□□□□□ -0.89
NECAP1-226ENST00000640481 WDR7Q9Y4E6 1490 aa9.5□□□□□ -0.89
NECAP1-226ENST00000640481 MAST1Q9Y2H9 1570 aa9.5□□□□□ -0.89
NECAP1-226ENST00000640481 C11orf95C9JLR9 678 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-226ENST00000640481 NPM1P06748 294 aaKnown RBP eCLIP9.48□□□□□ -0.89
NECAP1-226ENST00000640481 FAM135AQ9P2D6 1515 aa9.48□□□□□ -0.89
NECAP1-226ENST00000640481 SPAG9O60271 1321 aaKnown RBP9.48□□□□□ -0.89
NECAP1-226ENST00000640481 ABCC1P33527 1531 aa9.48□□□□□ -0.89
NECAP1-226ENST00000640481 ASXL2Q76L83 1435 aa9.47□□□□□ -0.89
NECAP1-226ENST00000640481 KDM2AQ9Y2K7 1162 aa9.47□□□□□ -0.89
NECAP1-226ENST00000640481 PLXNC1O60486 1568 aa9.46□□□□□ -0.89
NECAP1-226ENST00000640481 DCAF11Q8TEB1 546 aa9.46□□□□□ -0.89
NECAP1-226ENST00000640481 DUOX2Q9NRD8 1548 aa9.46□□□□□ -0.9
NECAP1-226ENST00000640481 SPATA31E1Q6ZUB1 1445 aa9.46□□□□□ -0.9
NECAP1-226ENST00000640481 CCER2I3L3R5 266 aa9.45□□□□□ -0.9
NECAP1-226ENST00000640481 FANCAO15360 1455 aa9.45□□□□□ -0.9
NECAP1-226ENST00000640481 ARAP3Q8WWN8 1544 aa9.45□□□□□ -0.9
NECAP1-226ENST00000640481 MYT1LQ9UL68 1186 aa9.45□□□□□ -0.9
NECAP1-226ENST00000640481 RGL3Q3MIN7 710 aa9.44□□□□□ -0.9
NECAP1-226ENST00000640481 ERBINQ96RT1 1412 aa9.44□□□□□ -0.9
NECAP1-226ENST00000640481 CCDC7Q96M83 1385 aa9.44□□□□□ -0.9
NECAP1-226ENST00000640481 UNC13BO14795 1591 aa9.44□□□□□ -0.9
NECAP1-226ENST00000640481 CCDC144AA2RUR9 1427 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms