RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 ABCC8Q09428 1581 aa11.67□□□□□ -0.54
NECAP1-220ENST00000639841 IFT140Q96RY7 1462 aa11.65□□□□□ -0.54
NECAP1-220ENST00000639841 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
NECAP1-220ENST00000639841 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
NECAP1-220ENST00000639841 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
NECAP1-220ENST00000639841 URB2Q14146 1524 aaKnown RBP11.64□□□□□ -0.55
NECAP1-220ENST00000639841 ZNF692Q9BU19 519 aaPredicted RBP11.61□□□□□ -0.55
NECAP1-220ENST00000639841 FOXD4L5Q5VV16 416 aaPredicted RBP11.61□□□□□ -0.55
NECAP1-220ENST00000639841 FOXD4L4Q8WXT5 416 aaPredicted RBP11.61□□□□□ -0.55
NECAP1-220ENST00000639841 AEBP1Q8IUX7 1158 aa11.6□□□□□ -0.55
NECAP1-220ENST00000639841 RSF1Q96T23 1441 aaPredicted RBP11.6□□□□□ -0.55
NECAP1-220ENST00000639841 PLEKHG5O94827 1062 aa11.59□□□□□ -0.55
NECAP1-220ENST00000639841 NUBP1P53384 320 aa11.59□□□□□ -0.55
NECAP1-220ENST00000639841 RIMBP3CA6NJZ7 1639 aa11.59□□□□□ -0.55
NECAP1-220ENST00000639841 RIMBP3BA6NNM3 1639 aa11.59□□□□□ -0.55
NECAP1-220ENST00000639841 RIMBP3Q9UFD9 1639 aa11.59□□□□□ -0.55
NECAP1-220ENST00000639841 TRAK2O60296 914 aa11.59□□□□□ -0.55
NECAP1-220ENST00000639841 ONECUT3O60422 494 aaPredicted RBP11.59□□□□□ -0.55
NECAP1-220ENST00000639841 FLIIQ13045 1269 aa11.58□□□□□ -0.56
NECAP1-220ENST00000639841 CLUAP1Q96AJ1 413 aa11.58□□□□□ -0.56
NECAP1-220ENST00000639841 RBM25P49756 843 aaKnown RBP11.57□□□□□ -0.56
NECAP1-220ENST00000639841 SSUH2Q9Y2M2 353 aa11.57□□□□□ -0.56
NECAP1-220ENST00000639841 TMCO4Q5TGY1 634 aa11.56□□□□□ -0.56
NECAP1-220ENST00000639841 A6NJR5 290 aa11.56□□□□□ -0.56
NECAP1-220ENST00000639841 CDK11BP21127 795 aaKnown RBP11.56□□□□□ -0.56
NECAP1-220ENST00000639841 MFAP1P55081 439 aaKnown RBP11.56□□□□□ -0.56
NECAP1-220ENST00000639841 PDE4DQ08499 809 aa11.56□□□□□ -0.56
NECAP1-220ENST00000639841 E2F4Q16254 413 aa11.56□□□□□ -0.56
NECAP1-220ENST00000639841 FAM117AQ9C073 453 aa11.56□□□□□ -0.56
NECAP1-220ENST00000639841 CDK11AQ9UQ88 783 aaPredicted RBP11.56□□□□□ -0.56
NECAP1-220ENST00000639841 WDR97A6NE52 1622 aa11.55□□□□□ -0.56
NECAP1-220ENST00000639841 TRIM66O15016 1216 aa11.54□□□□□ -0.56
NECAP1-220ENST00000639841 HSP90B1P14625 803 aaKnown RBP11.54□□□□□ -0.56
NECAP1-220ENST00000639841 ARHGEF11O15085 1522 aa11.54□□□□□ -0.56
NECAP1-220ENST00000639841 DNMBPQ6XZF7 1577 aa11.54□□□□□ -0.56
NECAP1-220ENST00000639841 SPINK5Q9NQ38 1064 aaPredicted RBP11.53□□□□□ -0.56
NECAP1-220ENST00000639841 TOPBP1Q92547 1522 aa11.53□□□□□ -0.56
NECAP1-220ENST00000639841 HMGB1P09429 215 aaKnown RBP11.52□□□□□ -0.56
NECAP1-220ENST00000639841 ZNF316A6NFI3 1004 aaPredicted RBP11.52□□□□□ -0.57
NECAP1-220ENST00000639841 DCAF8Q5TAQ9 597 aa11.52□□□□□ -0.57
NECAP1-220ENST00000639841 EIF4G3O43432 1585 aaKnown RBP11.51□□□□□ -0.57
NECAP1-220ENST00000639841 PLEKHG3A1L390 1219 aa11.51□□□□□ -0.57
NECAP1-220ENST00000639841 GZF1Q9H116 711 aaPredicted RBP11.5□□□□□ -0.57
NECAP1-220ENST00000639841 PUS7Q96PZ0 661 aaKnown RBP11.5□□□□□ -0.57
NECAP1-220ENST00000639841 ZBTB12Q9Y330 459 aaPredicted RBP11.49□□□□□ -0.57
NECAP1-220ENST00000639841 SMYD5Q6GMV2 418 aa11.48□□□□□ -0.57
NECAP1-220ENST00000639841 CHRDL2Q6WN34 429 aa11.47□□□□□ -0.57
NECAP1-220ENST00000639841 KRI1Q8N9T8 703 aaKnown RBP11.47□□□□□ -0.57
NECAP1-220ENST00000639841 CCDC88BA6NC98 1476 aa11.47□□□□□ -0.57
NECAP1-220ENST00000639841 ZNF608Q9ULD9 1512 aaPredicted RBP11.46□□□□□ -0.57
NECAP1-220ENST00000639841 CHRM1P11229 460 aaPredicted RBP11.46□□□□□ -0.58
NECAP1-220ENST00000639841 TARBP1Q13395 1621 aaKnown RBP11.45□□□□□ -0.58
NECAP1-220ENST00000639841 CAPN15O75808 1086 aa11.45□□□□□ -0.58
NECAP1-220ENST00000639841 CHD1O14646 1710 aa11.45□□□□□ -0.58
NECAP1-220ENST00000639841 IRF5Q13568 498 aa11.43□□□□□ -0.58
NECAP1-220ENST00000639841 RBM26Q5T8P6 1007 aaKnown RBP11.43□□□□□ -0.58
NECAP1-220ENST00000639841 RETREG2Q8NC44 543 aa11.43□□□□□ -0.58
NECAP1-220ENST00000639841 PLSCR2Q9NRY7 297 aa11.42□□□□□ -0.58
NECAP1-220ENST00000639841 CHMP4AQ9BY43 222 aa11.41□□□□□ -0.58
NECAP1-220ENST00000639841 GPIHBP1Q8IV16 184 aa11.41□□□□□ -0.58
NECAP1-220ENST00000639841 ZNF777Q9ULD5 760 aaPredicted RBP11.41□□□□□ -0.58
NECAP1-220ENST00000639841 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
NECAP1-220ENST00000639841 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
NECAP1-220ENST00000639841 SPDYE2Q495Y8 402 aa11.4□□□□□ -0.58
NECAP1-220ENST00000639841 SYNJ1O43426 1573 aa11.4□□□□□ -0.58
NECAP1-220ENST00000639841 E9PSI1 815 aa11.39□□□□□ -0.59
NECAP1-220ENST00000639841 ARAP1Q96P48 1450 aa11.38□□□□□ -0.59
NECAP1-220ENST00000639841 MAGI1Q96QZ7 1491 aaPredicted RBP11.38□□□□□ -0.59
NECAP1-220ENST00000639841 POLA1P09884 1462 aaPredicted RBP11.38□□□□□ -0.59
NECAP1-220ENST00000639841 CLASP1Q7Z460 1538 aa11.36□□□□□ -0.59
NECAP1-220ENST00000639841 SERPINA10Q9UK55 444 aa11.35□□□□□ -0.59
NECAP1-220ENST00000639841 CYB5RLQ6IPT4 315 aa11.34□□□□□ -0.59
NECAP1-220ENST00000639841 DDRGK1Q96HY6 314 aa11.34□□□□□ -0.59
NECAP1-220ENST00000639841 AQRO60306 1485 aaKnown RBP eCLIP11.34□□□□□ -0.591e-6■■□□□ 13.1
NECAP1-220ENST00000639841 FNBP4Q8N3X1 1017 aaPredicted RBP11.34□□□□□ -0.59
NECAP1-220ENST00000639841 MCM6Q14566 821 aa11.33□□□□□ -0.6
NECAP1-220ENST00000639841 FAM212AQ96EL1 285 aa11.33□□□□□ -0.6
NECAP1-220ENST00000639841 SOGA1O94964 1423 aa11.33□□□□□ -0.6
NECAP1-220ENST00000639841 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
NECAP1-220ENST00000639841 PROSER2Q86WR7 435 aaPredicted RBP11.32□□□□□ -0.6
NECAP1-220ENST00000639841 CCDC97Q96F63 343 aaPredicted RBP11.32□□□□□ -0.6
NECAP1-220ENST00000639841 MLLT3P42568 568 aaPredicted RBP11.31□□□□□ -0.6
NECAP1-220ENST00000639841 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
NECAP1-220ENST00000639841 SYNJ2O15056 1496 aa11.31□□□□□ -0.6
NECAP1-220ENST00000639841 PPP1R37O75864 691 aa11.3□□□□□ -0.6
NECAP1-220ENST00000639841 ARIH1Q9Y4X5 557 aaPredicted RBP11.3□□□□□ -0.6
NECAP1-220ENST00000639841 SNAPC4Q5SXM2 1469 aa11.3□□□□□ -0.6
NECAP1-220ENST00000639841 FBXW7Q969H0 707 aa11.3□□□□□ -0.6
NECAP1-220ENST00000639841 ABCB7O75027 752 aa11.28□□□□□ -0.6
NECAP1-220ENST00000639841 GOPCQ9HD26 462 aa11.28□□□□□ -0.6
NECAP1-220ENST00000639841 FGD5Q6ZNL6 1462 aa11.28□□□□□ -0.6
NECAP1-220ENST00000639841 RBM42Q9BTD8 480 aaKnown RBP11.27□□□□□ -0.61
NECAP1-220ENST00000639841 USP35Q9P2H5 1018 aa11.27□□□□□ -0.61
NECAP1-220ENST00000639841 PYGBP11216 843 aa11.27□□□□□ -0.61
NECAP1-220ENST00000639841 CHMP7Q8WUX9 453 aaPredicted RBP11.27□□□□□ -0.61
NECAP1-220ENST00000639841 POM121Q96HA1 1249 aa11.27□□□□□ -0.61
NECAP1-220ENST00000639841 NCKAP5LQ9HCH0 1330 aa11.26□□□□□ -0.61
NECAP1-220ENST00000639841 PBRM1Q86U86 1689 aa11.25□□□□□ -0.61
NECAP1-220ENST00000639841 PARP9Q8IXQ6 854 aa11.24□□□□□ -0.61
NECAP1-220ENST00000639841 RAD54L2Q9Y4B4 1467 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms