RNA–Protein interactions for RNA: ENST00000638762.1

PAX6-239, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-239ENST00000638762 CROCC2H7BZ55 1655 aa16.69■□□□□ 0.26
PAX6-239ENST00000638762 ABCA8O94911 1581 aa16.69■□□□□ 0.26
PAX6-239ENST00000638762 RRP7BPQ9NSQ0 103 aa16.69■□□□□ 0.26
PAX6-239ENST00000638762 MPHOSPH9Q99550 1183 aa16.68■□□□□ 0.26
PAX6-239ENST00000638762 KDM6BO15054 1643 aa16.67■□□□□ 0.26
PAX6-239ENST00000638762 CAMSAP2Q08AD1 1489 aa16.66■□□□□ 0.26
PAX6-239ENST00000638762 ANP32CO43423 234 aa16.66■□□□□ 0.26
PAX6-239ENST00000638762 GPATCH8Q9UKJ3 1502 aaKnown RBP16.66■□□□□ 0.26
PAX6-239ENST00000638762 DDX10Q13206 875 aaKnown RBP16.66■□□□□ 0.26
PAX6-239ENST00000638762 JPH4Q96JJ6 628 aa16.66■□□□□ 0.26
PAX6-239ENST00000638762 RPRD2Q5VT52 1461 aaKnown RBP16.65■□□□□ 0.26
PAX6-239ENST00000638762 SHANK2Q9UPX8 1470 aa16.65■□□□□ 0.26
PAX6-239ENST00000638762 TRIM52Q96A61 297 aa16.65■□□□□ 0.26
PAX6-239ENST00000638762 KIF14Q15058 1648 aa16.64■□□□□ 0.25
PAX6-239ENST00000638762 CHIC2Q9UKJ5 165 aa16.64■□□□□ 0.25
PAX6-239ENST00000638762 ANKRD30BQ9BXX2 1392 aa16.63■□□□□ 0.25
PAX6-239ENST00000638762 PLB1Q6P1J6 1458 aa16.63■□□□□ 0.25
PAX6-239ENST00000638762 PRG4Q92954 1404 aaPredicted RBP16.61■□□□□ 0.25
PAX6-239ENST00000638762 NCOA1Q15788 1441 aa16.61■□□□□ 0.25
PAX6-239ENST00000638762 CFDP1Q9UEE9 299 aaPredicted RBP16.61■□□□□ 0.25
PAX6-239ENST00000638762 ANKRD30AQ9BXX3 1397 aa16.59■□□□□ 0.25
PAX6-239ENST00000638762 ABCC10Q5T3U5 1492 aa16.59■□□□□ 0.25
PAX6-239ENST00000638762 CDC42BPAQ5VT25 1732 aa16.58■□□□□ 0.24
PAX6-239ENST00000638762 PLEKHD1A6NEE1 506 aa16.57■□□□□ 0.24
PAX6-239ENST00000638762 EIF4G2P78344 907 aaKnown RBP eCLIP16.57■□□□□ 0.24
PAX6-239ENST00000638762 ARHGEF5Q12774 1597 aa16.57■□□□□ 0.24
PAX6-239ENST00000638762 POLR1AO95602 1720 aaPredicted RBP16.56■□□□□ 0.24
PAX6-239ENST00000638762 TEX14Q8IWB6 1497 aa16.56■□□□□ 0.24
PAX6-239ENST00000638762 ATP10BO94823 1461 aa16.56■□□□□ 0.24
PAX6-239ENST00000638762 KDM5DQ9BY66 1539 aa16.55■□□□□ 0.24
PAX6-239ENST00000638762 PZPP20742 1482 aa16.54■□□□□ 0.24
PAX6-239ENST00000638762 KIAA1107Q9UPP5 1409 aa16.53■□□□□ 0.24
PAX6-239ENST00000638762 RSPH4AQ5TD94 716 aa16.53■□□□□ 0.24
PAX6-239ENST00000638762 SLC4A1APQ9BWU0 796 aaKnown RBP16.52■□□□□ 0.23
PAX6-239ENST00000638762 SHROOM2Q13796 1616 aa16.52■□□□□ 0.23
PAX6-239ENST00000638762 ZNF644Q9H582 1327 aaPredicted RBP16.51■□□□□ 0.23
PAX6-239ENST00000638762 L3MBTL2Q969R5 705 aa16.51■□□□□ 0.23
PAX6-239ENST00000638762 ARID3CA6NKF2 412 aa16.5■□□□□ 0.23
PAX6-239ENST00000638762 HSPA5P11021 654 aaKnown RBP16.5■□□□□ 0.23
PAX6-239ENST00000638762 SUPT16HQ9Y5B9 1047 aaKnown RBP16.5■□□□□ 0.23
PAX6-239ENST00000638762 PTPRGP23470 1445 aa16.49■□□□□ 0.23
PAX6-239ENST00000638762 ANKRD50Q9ULJ7 1429 aa16.49■□□□□ 0.23
PAX6-239ENST00000638762 CNTLNQ9NXG0 1405 aa16.49■□□□□ 0.23
PAX6-239ENST00000638762 MBD5Q9P267 1494 aa16.48■□□□□ 0.23
PAX6-239ENST00000638762 PREX2Q70Z35 1606 aa16.48■□□□□ 0.23
PAX6-239ENST00000638762 C9orf84Q5VXU9 1444 aa16.47■□□□□ 0.23
PAX6-239ENST00000638762 SPATA31E1Q6ZUB1 1445 aa16.46■□□□□ 0.23
PAX6-239ENST00000638762 ARID4BQ4LE39 1312 aaPredicted RBP16.46■□□□□ 0.23
PAX6-239ENST00000638762 ARHGEF12Q9NZN5 1544 aa16.46■□□□□ 0.22
PAX6-239ENST00000638762 CHD1O14646 1710 aa16.45■□□□□ 0.22
PAX6-239ENST00000638762 MAST1Q9Y2H9 1570 aa16.45■□□□□ 0.22
PAX6-239ENST00000638762 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
PAX6-239ENST00000638762 PRKCSHP14314 528 aaPredicted RBP16.44■□□□□ 0.22
PAX6-239ENST00000638762 TSPY4P0CV99 314 aa16.44■□□□□ 0.22
PAX6-239ENST00000638762 TSPY10P0CW01 314 aa16.44■□□□□ 0.22
PAX6-239ENST00000638762 HIRIP3Q9BW71 556 aaPredicted RBP16.44■□□□□ 0.22
PAX6-239ENST00000638762 UHRF1BP1Q6BDS2 1440 aa16.44■□□□□ 0.22
PAX6-239ENST00000638762 KCNH8Q96L42 1107 aa16.43■□□□□ 0.22
PAX6-239ENST00000638762 CCDC7Q96M83 1385 aa16.43■□□□□ 0.22
PAX6-239ENST00000638762 CCDC141Q6ZP82 1450 aa16.43■□□□□ 0.22
PAX6-239ENST00000638762 PLEKHH2Q8IVE3 1493 aa16.43■□□□□ 0.22
PAX6-239ENST00000638762 CDC42BPBQ9Y5S2 1711 aa16.41■□□□□ 0.22
PAX6-239ENST00000638762 ZNF777Q9ULD5 760 aaPredicted RBP16.39■□□□□ 0.21
PAX6-239ENST00000638762 ABCC2Q92887 1545 aa16.38■□□□□ 0.21
PAX6-239ENST00000638762 SAMD9LQ8IVG5 1584 aa16.38■□□□□ 0.21
PAX6-239ENST00000638762 NBPF8Q3BBV2 869 aa16.37■□□□□ 0.21
PAX6-239ENST00000638762 SLC24A1O60721 1099 aa16.36■□□□□ 0.21
PAX6-239ENST00000638762 NEFLP07196 543 aa16.36■□□□□ 0.21
PAX6-239ENST00000638762 FOXD1Q16676 465 aa16.36■□□□□ 0.21
PAX6-239ENST00000638762 RALGAPBQ86X10 1494 aa16.36■□□□□ 0.21
PAX6-239ENST00000638762 PLXNC1O60486 1568 aa16.36■□□□□ 0.21
PAX6-239ENST00000638762 KIF15Q9NS87 1388 aa16.36■□□□□ 0.21
PAX6-239ENST00000638762 PKD2Q13563 968 aa16.35■□□□□ 0.21
PAX6-239ENST00000638762 UHRF1BP1LA0JNW5 1464 aa16.35■□□□□ 0.21
PAX6-239ENST00000638762 ROCK2O75116 1388 aaKnown RBP16.35■□□□□ 0.21
PAX6-239ENST00000638762 NUP155O75694 1391 aa16.35■□□□□ 0.21
PAX6-239ENST00000638762 MYO5CQ9NQX4 1742 aa16.35■□□□□ 0.21
PAX6-239ENST00000638762 UNC13BO14795 1591 aa16.35■□□□□ 0.21
PAX6-239ENST00000638762 KDM5CP41229 1560 aa16.33■□□□□ 0.21
PAX6-239ENST00000638762 OSCARQ8IYS5 282 aa16.33■□□□□ 0.2
PAX6-239ENST00000638762 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.31■□□□□ 0.2
PAX6-239ENST00000638762 ERICH6BQ5W0A0 696 aa16.31■□□□□ 0.2
PAX6-239ENST00000638762 PRKRIP1Q9H875 184 aaPredicted RBP16.31■□□□□ 0.2
PAX6-239ENST00000638762 KIF7Q2M1P5 1343 aa16.3■□□□□ 0.2
PAX6-239ENST00000638762 ARAP3Q8WWN8 1544 aa16.29■□□□□ 0.2
PAX6-239ENST00000638762 FAM135AQ9P2D6 1515 aa16.29■□□□□ 0.2
PAX6-239ENST00000638762 ERCC6L2Q5T890 1561 aa16.29■□□□□ 0.2
PAX6-239ENST00000638762 CLASP1Q7Z460 1538 aa16.29■□□□□ 0.2
PAX6-239ENST00000638762 ARHGAP5Q13017 1502 aa16.29■□□□□ 0.2
PAX6-239ENST00000638762 USP47Q96K76 1375 aa16.29■□□□□ 0.2
PAX6-239ENST00000638762 TTC37Q6PGP7 1564 aa16.28■□□□□ 0.2
PAX6-239ENST00000638762 DUOX2Q9NRD8 1548 aa16.28■□□□□ 0.2
PAX6-239ENST00000638762 IQGAP3Q86VI3 1631 aa16.27■□□□□ 0.2
PAX6-239ENST00000638762 KTN1Q86UP2 1357 aaKnown RBP16.27■□□□□ 0.19
PAX6-239ENST00000638762 ERBINQ96RT1 1412 aa16.26■□□□□ 0.19
PAX6-239ENST00000638762 LAMC1P11047 1609 aa16.26■□□□□ 0.19
PAX6-239ENST00000638762 SYCP2Q9BX26 1530 aa16.26■□□□□ 0.19
PAX6-239ENST00000638762 ATP10AO60312 1499 aa16.26■□□□□ 0.19
PAX6-239ENST00000638762 HNRNPMP52272 730 aaKnown RBP eCLIP16.26■□□□□ 0.19
PAX6-239ENST00000638762 TSHZ2Q9NRE2 1034 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms