RNA–Protein interactions for RNA: ENST00000637671.1

SYNGAP1-223, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-223ENST00000637671 PLCH2O75038 1416 aa19.65■□□□□ 0.74
SYNGAP1-223ENST00000637671 CDK13Q14004 1512 aaKnown RBP19.65■□□□□ 0.74
SYNGAP1-223ENST00000637671 SIGLEC1Q9BZZ2 1709 aa19.64■□□□□ 0.73
SYNGAP1-223ENST00000637671 C9orf84Q5VXU9 1444 aa19.63■□□□□ 0.73
SYNGAP1-223ENST00000637671 ATP10AO60312 1499 aa19.62■□□□□ 0.73
SYNGAP1-223ENST00000637671 EFCAB2Q5VUJ9 269 aa19.61■□□□□ 0.73
SYNGAP1-223ENST00000637671 ARHGEF12Q9NZN5 1544 aa19.61■□□□□ 0.73
SYNGAP1-223ENST00000637671 ATP1B4Q9UN42 357 aaPredicted RBP19.59■□□□□ 0.73
SYNGAP1-223ENST00000637671 CDK11AQ9UQ88 783 aaPredicted RBP19.59■□□□□ 0.73
SYNGAP1-223ENST00000637671 PREX1Q8TCU6 1659 aa19.57■□□□□ 0.72
SYNGAP1-223ENST00000637671 FMN1Q68DA7 1419 aa19.57■□□□□ 0.72
SYNGAP1-223ENST00000637671 ZNF518AQ6AHZ1 1483 aa19.56■□□□□ 0.72
SYNGAP1-223ENST00000637671 DMRT2Q9Y5R5 561 aa19.56■□□□□ 0.72
SYNGAP1-223ENST00000637671 MYO5CQ9NQX4 1742 aa19.56■□□□□ 0.72
SYNGAP1-223ENST00000637671 UHRF1BP1Q6BDS2 1440 aa19.53■□□□□ 0.72
SYNGAP1-223ENST00000637671 CEBPAP49715 358 aaPredicted RBP19.53■□□□□ 0.72
SYNGAP1-223ENST00000637671 MYT1LQ9UL68 1186 aa19.53■□□□□ 0.72
SYNGAP1-223ENST00000637671 KIF14Q15058 1648 aa19.53■□□□□ 0.72
SYNGAP1-223ENST00000637671 CLIP1P30622 1438 aa19.51■□□□□ 0.71
SYNGAP1-223ENST00000637671 ARHGAP5Q13017 1502 aa19.51■□□□□ 0.71
SYNGAP1-223ENST00000637671 UBTFP17480 764 aaKnown RBP19.5■□□□□ 0.71
SYNGAP1-223ENST00000637671 TROQ12816 1431 aaPredicted RBP19.49■□□□□ 0.71
SYNGAP1-223ENST00000637671 KDM5CP41229 1560 aa19.49■□□□□ 0.71
SYNGAP1-223ENST00000637671 AFAP1Q8N556 730 aa19.48■□□□□ 0.71
SYNGAP1-223ENST00000637671 DISP3Q9P2K9 1392 aa19.47■□□□□ 0.71
SYNGAP1-223ENST00000637671 ESF1Q9H501 851 aaKnown RBP19.46■□□□□ 0.71
SYNGAP1-223ENST00000637671 EHMT2Q96KQ7 1210 aa19.45■□□□□ 0.7
SYNGAP1-223ENST00000637671 REREQ9P2R6 1566 aa19.44■□□□□ 0.7
SYNGAP1-223ENST00000637671 ARHGAP35Q9NRY4 1499 aa19.44■□□□□ 0.7
SYNGAP1-223ENST00000637671 DIP2CQ9Y2E4 1556 aa19.44■□□□□ 0.7
SYNGAP1-223ENST00000637671 STRCQ7RTU9 1775 aa19.42■□□□□ 0.7
SYNGAP1-223ENST00000637671 MLH3Q9UHC1 1453 aa19.41■□□□□ 0.7
SYNGAP1-223ENST00000637671 PTPRTO14522 1441 aa19.41■□□□□ 0.7
SYNGAP1-223ENST00000637671 SETD1BQ9UPS6 1966 aaKnown RBP19.4■□□□□ 0.7
SYNGAP1-223ENST00000637671 AGLP35573 1532 aa19.39■□□□□ 0.69
SYNGAP1-223ENST00000637671 ABCA6Q8N139 1617 aa19.39■□□□□ 0.69
SYNGAP1-223ENST00000637671 TRAPPC8Q9Y2L5 1435 aa19.38■□□□□ 0.69
SYNGAP1-223ENST00000637671 CNTLNQ9NXG0 1405 aa19.37■□□□□ 0.69
SYNGAP1-223ENST00000637671 C3P01024 1663 aa19.36■□□□□ 0.69
SYNGAP1-223ENST00000637671 ABCC1P33527 1531 aa19.36■□□□□ 0.69
SYNGAP1-223ENST00000637671 SOCS7O14512 581 aa19.36■□□□□ 0.69
SYNGAP1-223ENST00000637671 ILDR2Q71H61 639 aa19.35■□□□□ 0.69
SYNGAP1-223ENST00000637671 PREX2Q70Z35 1606 aa19.35■□□□□ 0.69
SYNGAP1-223ENST00000637671 CCDC18Q5T9S5 1454 aa19.34■□□□□ 0.69
SYNGAP1-223ENST00000637671 CDC42BPBQ9Y5S2 1711 aa19.33■□□□□ 0.68
SYNGAP1-223ENST00000637671 SPATA31D1Q6ZQQ2 1576 aa19.32■□□□□ 0.68
SYNGAP1-223ENST00000637671 NCOA1Q15788 1441 aa19.32■□□□□ 0.68
SYNGAP1-223ENST00000637671 ITSN2Q9NZM3 1697 aa19.31■□□□□ 0.68
SYNGAP1-223ENST00000637671 IQSEC2Q5JU85 1478 aa19.31■□□□□ 0.68
SYNGAP1-223ENST00000637671 LRRIQ1Q96JM4 1722 aa19.3■□□□□ 0.68
SYNGAP1-223ENST00000637671 NPATQ14207 1427 aa19.29■□□□□ 0.68
SYNGAP1-223ENST00000637671 CASKIN1Q8WXD9 1431 aa19.29■□□□□ 0.68
SYNGAP1-223ENST00000637671 LTBP4Q8N2S1 1624 aa19.29■□□□□ 0.68
SYNGAP1-223ENST00000637671 KIDINS220Q9ULH0 1771 aa19.27■□□□□ 0.67
SYNGAP1-223ENST00000637671 ZNF777Q9ULD5 760 aaPredicted RBP19.25■□□□□ 0.67
SYNGAP1-223ENST00000637671 CAMSAP1Q5T5Y3 1602 aa19.25■□□□□ 0.67
SYNGAP1-223ENST00000637671 SPAG9O60271 1321 aaKnown RBP19.24■□□□□ 0.67
SYNGAP1-223ENST00000637671 MROH2AA6NES4 1674 aa19.24■□□□□ 0.67
SYNGAP1-223ENST00000637671 SAMD9LQ8IVG5 1584 aa19.23■□□□□ 0.67
SYNGAP1-223ENST00000637671 ZMYM3Q14202 1370 aa19.22■□□□□ 0.67
SYNGAP1-223ENST00000637671 CDC42BPAQ5VT25 1732 aa19.22■□□□□ 0.67
SYNGAP1-223ENST00000637671 FYCO1Q9BQS8 1478 aa19.21■□□□□ 0.67
SYNGAP1-223ENST00000637671 SYCP2Q9BX26 1530 aa19.2■□□□□ 0.66
SYNGAP1-223ENST00000637671 PKD2Q13563 968 aa19.18■□□□□ 0.66
SYNGAP1-223ENST00000637671 NCKAP5LQ9HCH0 1330 aa19.18■□□□□ 0.66
SYNGAP1-223ENST00000637671 PLEKHH2Q8IVE3 1493 aa19.17■□□□□ 0.66
SYNGAP1-223ENST00000637671 ATP7AQ04656 1500 aa19.17■□□□□ 0.66
SYNGAP1-223ENST00000637671 UBAP1LF5GYI3 381 aa19.17■□□□□ 0.66
SYNGAP1-223ENST00000637671 PLA2R1Q13018 1463 aa19.16■□□□□ 0.66
SYNGAP1-223ENST00000637671 GPATCH8Q9UKJ3 1502 aaKnown RBP19.16■□□□□ 0.66
SYNGAP1-223ENST00000637671 HNRNPMP52272 730 aaKnown RBP eCLIP19.16■□□□□ 0.66
SYNGAP1-223ENST00000637671 ZNF335Q9H4Z2 1342 aaPredicted RBP19.16■□□□□ 0.66
SYNGAP1-223ENST00000637671 SUPT6HQ7KZ85 1726 aaKnown RBP19.16■□□□□ 0.66
SYNGAP1-223ENST00000637671 KIAA1107Q9UPP5 1409 aa19.16■□□□□ 0.66
SYNGAP1-223ENST00000637671 A2MP01023 1474 aa19.16■□□□□ 0.66
SYNGAP1-223ENST00000637671 MYO3AQ8NEV4 1616 aa19.14■□□□□ 0.66
SYNGAP1-223ENST00000637671 CFDP1Q9UEE9 299 aaPredicted RBP19.14■□□□□ 0.65
SYNGAP1-223ENST00000637671 PLXNC1O60486 1568 aa19.14■□□□□ 0.65
SYNGAP1-223ENST00000637671 ZNF142P52746 1687 aaPredicted RBP19.14■□□□□ 0.65
SYNGAP1-223ENST00000637671 CLTCQ00610 1675 aaKnown RBP19.14■□□□□ 0.65
SYNGAP1-223ENST00000637671 CHIC1Q5VXU3 224 aa19.13■□□□□ 0.65
SYNGAP1-223ENST00000637671 CEP170BQ9Y4F5 1589 aaPredicted RBP19.13■□□□□ 0.65
SYNGAP1-223ENST00000637671 INO80Q9ULG1 1556 aaPredicted RBP19.12■□□□□ 0.65
SYNGAP1-223ENST00000637671 PTPRKQ15262 1439 aa19.12■□□□□ 0.65
SYNGAP1-223ENST00000637671 CCNB3Q8WWL7 1395 aa19.12■□□□□ 0.65
SYNGAP1-223ENST00000637671 GGT6Q6P531 493 aa19.12■□□□□ 0.65
SYNGAP1-223ENST00000637671 TCOF1Q13428 1488 aaKnown RBP19.11■□□□□ 0.65
SYNGAP1-223ENST00000637671 PPP6R1Q9UPN7 881 aa19.1■□□□□ 0.65
SYNGAP1-223ENST00000637671 MTUS2Q5JR59 1369 aa19.06■□□□□ 0.64
SYNGAP1-223ENST00000637671 ADGBQ8N7X0 1667 aa19.05■□□□□ 0.64
SYNGAP1-223ENST00000637671 A2ML1A8K2U0 1454 aa19.04■□□□□ 0.64
SYNGAP1-223ENST00000637671 SCAF1Q9H7N4 1312 aaKnown RBP19.02■□□□□ 0.64
SYNGAP1-223ENST00000637671 RTEL1-TNFRSF6BF6WH68 1400 aa19■□□□□ 0.63
SYNGAP1-223ENST00000637671 TOM1O60784 492 aa18.99■□□□□ 0.63
SYNGAP1-223ENST00000637671 DNMT1P26358 1616 aaKnown RBP18.99■□□□□ 0.63
SYNGAP1-223ENST00000637671 CPS1P31327 1500 aa18.99■□□□□ 0.63
SYNGAP1-223ENST00000637671 TNRQ92752 1358 aa18.98■□□□□ 0.63
SYNGAP1-223ENST00000637671 ZNF644Q9H582 1327 aaPredicted RBP18.98■□□□□ 0.63
SYNGAP1-223ENST00000637671 DHX29Q7Z478 1369 aaKnown RBP18.97■□□□□ 0.63
SYNGAP1-223ENST00000637671 PIP4K2BP78356 416 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms