RNA–Protein interactions for RNA: ENST00000637392.1

CLCN2-219, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 4,615 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-219ENST00000637392 UPF2Q9HAU5 1272 aaKnown RBP13.59□□□□□ -0.23
CLCN2-219ENST00000637392 TOPBP1Q92547 1522 aa13.58□□□□□ -0.23
CLCN2-219ENST00000637392 UACAQ9BZF9 1416 aa13.58□□□□□ -0.24
CLCN2-219ENST00000637392 FGD6Q6ZV73 1430 aa13.57□□□□□ -0.24
CLCN2-219ENST00000637392 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
CLCN2-219ENST00000637392 CHGAP10645 457 aaKnown RBP13.56□□□□□ -0.24
CLCN2-219ENST00000637392 WASHC2AQ641Q2 1341 aa13.56□□□□□ -0.24
CLCN2-219ENST00000637392 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
CLCN2-219ENST00000637392 CASKIN1Q8WXD9 1431 aa13.55□□□□□ -0.24
CLCN2-219ENST00000637392 BIVM-ERCC5R4GMW8 1640 aa13.55□□□□□ -0.24
CLCN2-219ENST00000637392 TCERG1O14776 1098 aaKnown RBP13.55□□□□□ -0.24
CLCN2-219ENST00000637392 ZNF644Q9H582 1327 aaPredicted RBP13.54□□□□□ -0.24
CLCN2-219ENST00000637392 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
CLCN2-219ENST00000637392 JPH4Q96JJ6 628 aa13.54□□□□□ -0.24
CLCN2-219ENST00000637392 RCAN3Q9UKA8 241 aa13.54□□□□□ -0.24
CLCN2-219ENST00000637392 TIAM1Q13009 1591 aa13.54□□□□□ -0.24
CLCN2-219ENST00000637392 PKD2Q13563 968 aa13.52□□□□□ -0.24
CLCN2-219ENST00000637392 CNTLNQ9NXG0 1405 aa13.52□□□□□ -0.25
CLCN2-219ENST00000637392 DCAF11Q8TEB1 546 aa13.52□□□□□ -0.25
CLCN2-219ENST00000637392 CC2D1BQ5T0F9 858 aaKnown RBP13.51□□□□□ -0.25
CLCN2-219ENST00000637392 MSH5O43196 834 aa13.51□□□□□ -0.25
CLCN2-219ENST00000637392 CCDC7Q96M83 1385 aa13.51□□□□□ -0.25
CLCN2-219ENST00000637392 EFCAB5A4FU69 1503 aa13.51□□□□□ -0.25
CLCN2-219ENST00000637392 FYCO1Q9BQS8 1478 aa13.5□□□□□ -0.25
CLCN2-219ENST00000637392 RGS3P49796 1198 aa13.5□□□□□ -0.25
CLCN2-219ENST00000637392 ABCA10Q8WWZ4 1543 aa13.5□□□□□ -0.25
CLCN2-219ENST00000637392 TRIM44Q96DX7 344 aaPredicted RBP13.49□□□□□ -0.25
CLCN2-219ENST00000637392 RALBP1Q15311 655 aa13.49□□□□□ -0.25
CLCN2-219ENST00000637392 NAP1L5Q96NT1 182 aaPredicted RBP13.49□□□□□ -0.25
CLCN2-219ENST00000637392 TNNT2P45379 298 aaPredicted RBP13.49□□□□□ -0.25
CLCN2-219ENST00000637392 BECN1Q14457 450 aa13.49□□□□□ -0.25
CLCN2-219ENST00000637392 KNSTRNQ9Y448 316 aa13.48□□□□□ -0.25
CLCN2-219ENST00000637392 MYOM3Q5VTT5 1437 aa13.48□□□□□ -0.25
CLCN2-219ENST00000637392 HNRNPMP52272 730 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLCN2-219ENST00000637392 KTN1Q86UP2 1357 aaKnown RBP13.46□□□□□ -0.25
CLCN2-219ENST00000637392 KIF7Q2M1P5 1343 aa13.46□□□□□ -0.25
CLCN2-219ENST00000637392 GRIN2BQ13224 1484 aa13.46□□□□□ -0.25
CLCN2-219ENST00000637392 ANKRD30AQ9BXX3 1397 aa13.45□□□□□ -0.26
CLCN2-219ENST00000637392 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
CLCN2-219ENST00000637392 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
CLCN2-219ENST00000637392 ROCK2O75116 1388 aaKnown RBP13.45□□□□□ -0.26
CLCN2-219ENST00000637392 MAPKBP1O60336 1514 aa13.44□□□□□ -0.26
CLCN2-219ENST00000637392 CCDC184Q52MB2 194 aa13.44□□□□□ -0.26
CLCN2-219ENST00000637392 PDE4AP27815 886 aa13.43□□□□□ -0.26
CLCN2-219ENST00000637392 EXOC6Q8TAG9 804 aa13.43□□□□□ -0.26
CLCN2-219ENST00000637392 HFM1A2PYH4 1435 aa13.43□□□□□ -0.26
CLCN2-219ENST00000637392 MRC2Q9UBG0 1479 aa13.43□□□□□ -0.26
CLCN2-219ENST00000637392 NCOA2Q15596 1464 aa13.42□□□□□ -0.26
CLCN2-219ENST00000637392 RRP1P56182 461 aaKnown RBP13.42□□□□□ -0.26
CLCN2-219ENST00000637392 PDE3BQ13370 1112 aa13.42□□□□□ -0.26
CLCN2-219ENST00000637392 KIF15Q9NS87 1388 aa13.42□□□□□ -0.26
CLCN2-219ENST00000637392 NLRP13Q86W25 1043 aa13.42□□□□□ -0.26
CLCN2-219ENST00000637392 USP47Q96K76 1375 aa13.42□□□□□ -0.26
CLCN2-219ENST00000637392 USP35Q9P2H5 1018 aa13.41□□□□□ -0.26
CLCN2-219ENST00000637392 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.41□□□□□ -0.26
CLCN2-219ENST00000637392 MYBBP1AQ9BQG0 1328 aaKnown RBP13.41□□□□□ -0.26
CLCN2-219ENST00000637392 TMF1P82094 1093 aa13.41□□□□□ -0.26
CLCN2-219ENST00000637392 CDCA8Q53HL2 280 aa13.41□□□□□ -0.26
CLCN2-219ENST00000637392 URB2Q14146 1524 aaKnown RBP13.4□□□□□ -0.26
CLCN2-219ENST00000637392 MAP3K1Q13233 1512 aa13.4□□□□□ -0.26
CLCN2-219ENST00000637392 NUP155O75694 1391 aa13.4□□□□□ -0.26
CLCN2-219ENST00000637392 PAK3O75914 559 aaPredicted RBP13.4□□□□□ -0.26
CLCN2-219ENST00000637392 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.39□□□□□ -0.27
CLCN2-219ENST00000637392 ST20-MTHFSA0A0A6YYL1 179 aa13.38□□□□□ -0.27
CLCN2-219ENST00000637392 RSPH4AQ5TD94 716 aa13.38□□□□□ -0.27
CLCN2-219ENST00000637392 IFT140Q96RY7 1462 aa13.38□□□□□ -0.27
CLCN2-219ENST00000637392 ARID4BQ4LE39 1312 aaPredicted RBP13.37□□□□□ -0.27
CLCN2-219ENST00000637392 CUL7Q14999 1698 aa13.37□□□□□ -0.27
CLCN2-219ENST00000637392 CDK11BP21127 795 aaKnown RBP13.36□□□□□ -0.27
CLCN2-219ENST00000637392 AKNAQ7Z591 1439 aa13.36□□□□□ -0.27
CLCN2-219ENST00000637392 ZNF608Q9ULD9 1512 aaPredicted RBP13.36□□□□□ -0.27
CLCN2-219ENST00000637392 DNTTIP2Q5QJE6 756 aaKnown RBP13.35□□□□□ -0.27
CLCN2-219ENST00000637392 PLIN1O60240 522 aa13.35□□□□□ -0.27
CLCN2-219ENST00000637392 MS4A1P11836 297 aa13.35□□□□□ -0.27
CLCN2-219ENST00000637392 PTPRGP23470 1445 aa13.35□□□□□ -0.27
CLCN2-219ENST00000637392 NAIPQ13075 1403 aa13.35□□□□□ -0.27
CLCN2-219ENST00000637392 EFCAB2Q5VUJ9 269 aa13.34□□□□□ -0.27
CLCN2-219ENST00000637392 NBPF8Q3BBV2 869 aa13.34□□□□□ -0.27
CLCN2-219ENST00000637392 PCF11O94913 1555 aaKnown RBP13.34□□□□□ -0.27
CLCN2-219ENST00000637392 FRAT1Q92837 279 aaPredicted RBP13.34□□□□□ -0.27
CLCN2-219ENST00000637392 NEUROD2Q15784 382 aa13.33□□□□□ -0.28
CLCN2-219ENST00000637392 EHBP1L1Q8N3D4 1523 aa13.33□□□□□ -0.28
CLCN2-219ENST00000637392 NCLP19338 710 aaKnown RBP13.32□□□□□ -0.28
CLCN2-219ENST00000637392 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
CLCN2-219ENST00000637392 SMG6Q86US8 1419 aaKnown RBP13.31□□□□□ -0.28
CLCN2-219ENST00000637392 PTMAP06454 111 aaKnown RBP13.31□□□□□ -0.28
CLCN2-219ENST00000637392 CRBNQ96SW2 442 aa13.31□□□□□ -0.28
CLCN2-219ENST00000637392 SLC4A3P48751 1232 aa13.31□□□□□ -0.28
CLCN2-219ENST00000637392 ESF1Q9H501 851 aaKnown RBP13.31□□□□□ -0.28
CLCN2-219ENST00000637392 GSE1Q14687 1217 aa13.3□□□□□ -0.28
CLCN2-219ENST00000637392 C11orf95C9JLR9 678 aaPredicted RBP13.3□□□□□ -0.28
CLCN2-219ENST00000637392 MIA2Q96PC5 1412 aa13.29□□□□□ -0.28
CLCN2-219ENST00000637392 GOLGA2Q08379 1002 aa13.28□□□□□ -0.28
CLCN2-219ENST00000637392 SNAPC4Q5SXM2 1469 aa13.28□□□□□ -0.28
CLCN2-219ENST00000637392 PRDM2Q13029 1718 aa13.28□□□□□ -0.28
CLCN2-219ENST00000637392 KANK1Q14678 1352 aa13.28□□□□□ -0.28
CLCN2-219ENST00000637392 CENPQQ7L2Z9 268 aaPredicted RBP13.27□□□□□ -0.28
CLCN2-219ENST00000637392 TPRNQ4KMQ1 711 aa13.27□□□□□ -0.28
CLCN2-219ENST00000637392 HECW1Q76N89 1606 aa13.27□□□□□ -0.29
CLCN2-219ENST00000637392 L1TD1Q5T7N2 865 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms