RNA–Protein interactions for RNA: ENST00000637243.1

CHRNA4-218, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 85 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-218ENST00000637243 POGZQ7Z3K3 1410 aa10.19□□□□□ -0.78
CHRNA4-218ENST00000637243 MAGI2Q86UL8 1455 aa10.17□□□□□ -0.78
CHRNA4-218ENST00000637243 SETD1BQ9UPS6 1966 aaKnown RBP10.15□□□□□ -0.78
CHRNA4-218ENST00000637243 ATP10AO60312 1499 aa10.15□□□□□ -0.78
CHRNA4-218ENST00000637243 C3P01024 1663 aa10.15□□□□□ -0.79
CHRNA4-218ENST00000637243 PTPRTO14522 1441 aa10.15□□□□□ -0.79
CHRNA4-218ENST00000637243 SCAPERQ9BY12 1400 aa10.15□□□□□ -0.79
CHRNA4-218ENST00000637243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.14□□□□□ -0.79
CHRNA4-218ENST00000637243 HNRNPUL2Q1KMD3 747 aaKnown RBP10.14□□□□□ -0.79
CHRNA4-218ENST00000637243 CDK13Q14004 1512 aaKnown RBP10.13□□□□□ -0.79
CHRNA4-218ENST00000637243 C9orf84Q5VXU9 1444 aa10.13□□□□□ -0.79
CHRNA4-218ENST00000637243 UHRF1BP1Q6BDS2 1440 aa10.12□□□□□ -0.79
CHRNA4-218ENST00000637243 PLCH2O75038 1416 aa10.11□□□□□ -0.79
CHRNA4-218ENST00000637243 IQSEC2Q5JU85 1478 aa10.1□□□□□ -0.79
CHRNA4-218ENST00000637243 KDM5CP41229 1560 aa10.1□□□□□ -0.79
CHRNA4-218ENST00000637243 DIP2CQ9Y2E4 1556 aa10.1□□□□□ -0.79
CHRNA4-218ENST00000637243 PLEKHD1A6NEE1 506 aa10.1□□□□□ -0.79
CHRNA4-218ENST00000637243 DMRT2Q9Y5R5 561 aa10.1□□□□□ -0.79
CHRNA4-218ENST00000637243 NCOA1Q15788 1441 aa10.09□□□□□ -0.79
CHRNA4-218ENST00000637243 ABCA6Q8N139 1617 aa10.09□□□□□ -0.79
CHRNA4-218ENST00000637243 KIF14Q15058 1648 aa10.08□□□□□ -0.8
CHRNA4-218ENST00000637243 REREQ9P2R6 1566 aa10.08□□□□□ -0.8
CHRNA4-218ENST00000637243 MYO5CQ9NQX4 1742 aa10.07□□□□□ -0.8
CHRNA4-218ENST00000637243 RANGAP1P46060 587 aaPredicted RBP10.06□□□□□ -0.8
CHRNA4-218ENST00000637243 AFAP1Q8N556 730 aa10.06□□□□□ -0.8
CHRNA4-218ENST00000637243 CAMSAP1Q5T5Y3 1602 aa10.04□□□□□ -0.8
CHRNA4-218ENST00000637243 FAM9AQ8IZU1 332 aaPredicted RBP10.04□□□□□ -0.8
CHRNA4-218ENST00000637243 TRAPPC8Q9Y2L5 1435 aa10.04□□□□□ -0.8
CHRNA4-218ENST00000637243 MED1Q15648 1581 aaPredicted RBP10.04□□□□□ -0.8
CHRNA4-218ENST00000637243 LRRIQ1Q96JM4 1722 aa10.04□□□□□ -0.8
CHRNA4-218ENST00000637243 CDC42BPBQ9Y5S2 1711 aa10.04□□□□□ -0.8
CHRNA4-218ENST00000637243 ZNF335Q9H4Z2 1342 aaPredicted RBP10.04□□□□□ -0.8
CHRNA4-218ENST00000637243 ZNF518AQ6AHZ1 1483 aa10.04□□□□□ -0.8
CHRNA4-218ENST00000637243 AGLP35573 1532 aa10.03□□□□□ -0.8
CHRNA4-218ENST00000637243 CSRNP3Q8WYN3 585 aa10.03□□□□□ -0.8
CHRNA4-218ENST00000637243 KIDINS220Q9ULH0 1771 aa10.02□□□□□ -0.81
CHRNA4-218ENST00000637243 NCKAP5LQ9HCH0 1330 aa10.02□□□□□ -0.81
CHRNA4-218ENST00000637243 EFCAB2Q5VUJ9 269 aa10.01□□□□□ -0.81
CHRNA4-218ENST00000637243 MLH3Q9UHC1 1453 aa10.01□□□□□ -0.81
CHRNA4-218ENST00000637243 UBAP1LF5GYI3 381 aa10□□□□□ -0.81
CHRNA4-218ENST00000637243 ALKQ9UM73 1620 aa10□□□□□ -0.81
CHRNA4-218ENST00000637243 MROH2AA6NES4 1674 aa9.99□□□□□ -0.81
CHRNA4-218ENST00000637243 ZNF142P52746 1687 aaPredicted RBP9.99□□□□□ -0.81
CHRNA4-218ENST00000637243 ITSN2Q9NZM3 1697 aa9.99□□□□□ -0.81
CHRNA4-218ENST00000637243 TCOF1Q13428 1488 aaKnown RBP9.98□□□□□ -0.81
CHRNA4-218ENST00000637243 ABCC1P33527 1531 aa9.98□□□□□ -0.81
CHRNA4-218ENST00000637243 ARHGAP5Q13017 1502 aa9.98□□□□□ -0.81
CHRNA4-218ENST00000637243 MYO3AQ8NEV4 1616 aa9.97□□□□□ -0.81
CHRNA4-218ENST00000637243 HSPA1LP34931 641 aa9.97□□□□□ -0.81
CHRNA4-218ENST00000637243 NPATQ14207 1427 aa9.97□□□□□ -0.81
CHRNA4-218ENST00000637243 PREX2Q70Z35 1606 aa9.96□□□□□ -0.81
CHRNA4-218ENST00000637243 TROQ12816 1431 aaPredicted RBP9.96□□□□□ -0.82
CHRNA4-218ENST00000637243 CLTCQ00610 1675 aaKnown RBP9.96□□□□□ -0.82
CHRNA4-218ENST00000637243 CNTLNQ9NXG0 1405 aa9.95□□□□□ -0.82
CHRNA4-218ENST00000637243 PLA2R1Q13018 1463 aa9.95□□□□□ -0.82
CHRNA4-218ENST00000637243 SUPT6HQ7KZ85 1726 aaKnown RBP9.95□□□□□ -0.82
CHRNA4-218ENST00000637243 CDC42BPAQ5VT25 1732 aa9.94□□□□□ -0.82
CHRNA4-218ENST00000637243 SAMD9LQ8IVG5 1584 aa9.94□□□□□ -0.82
CHRNA4-218ENST00000637243 CEP170BQ9Y4F5 1589 aaPredicted RBP9.94□□□□□ -0.82
CHRNA4-218ENST00000637243 ZMYM3Q14202 1370 aa9.94□□□□□ -0.82
CHRNA4-218ENST00000637243 NEURL4Q96JN8 1562 aa9.93□□□□□ -0.82
CHRNA4-218ENST00000637243 ARHGAP35Q9NRY4 1499 aa9.93□□□□□ -0.82
CHRNA4-218ENST00000637243 PTPRKQ15262 1439 aa9.93□□□□□ -0.82
CHRNA4-218ENST00000637243 PLXNC1O60486 1568 aa9.92□□□□□ -0.82
CHRNA4-218ENST00000637243 DNMT1P26358 1616 aaKnown RBP9.91□□□□□ -0.82
CHRNA4-218ENST00000637243 PKD2Q13563 968 aa9.9□□□□□ -0.82
CHRNA4-218ENST00000637243 MYT1LQ9UL68 1186 aa9.9□□□□□ -0.82
CHRNA4-218ENST00000637243 VWDEQ8N2E2 1590 aa9.89□□□□□ -0.83
CHRNA4-218ENST00000637243 STRCP1A6NGW2 1772 aa9.89□□□□□ -0.83
CHRNA4-218ENST00000637243 PIP4K2BP78356 416 aa9.89□□□□□ -0.83
CHRNA4-218ENST00000637243 ATP1B4Q9UN42 357 aaPredicted RBP9.89□□□□□ -0.83
CHRNA4-218ENST00000637243 POLR1AO95602 1720 aaPredicted RBP9.89□□□□□ -0.83
CHRNA4-218ENST00000637243 ESF1Q9H501 851 aaKnown RBP9.88□□□□□ -0.83
CHRNA4-218ENST00000637243 RGS17Q9UGC6 210 aaPredicted RBP9.88□□□□□ -0.83
CHRNA4-218ENST00000637243 PPP6R1Q9UPN7 881 aa9.88□□□□□ -0.83
CHRNA4-218ENST00000637243 EEA1Q15075 1411 aa9.88□□□□□ -0.83
CHRNA4-218ENST00000637243 FMN1Q68DA7 1419 aa9.88□□□□□ -0.83
CHRNA4-218ENST00000637243 INO80Q9ULG1 1556 aaPredicted RBP9.88□□□□□ -0.83
CHRNA4-218ENST00000637243 SYCP2Q9BX26 1530 aa9.87□□□□□ -0.83
CHRNA4-218ENST00000637243 SHANK2Q9UPX8 1470 aa9.87□□□□□ -0.83
CHRNA4-218ENST00000637243 A2ML1A8K2U0 1454 aa9.86□□□□□ -0.83
CHRNA4-218ENST00000637243 CPS1P31327 1500 aa9.86□□□□□ -0.83
CHRNA4-218ENST00000637243 ATP7AQ04656 1500 aa9.86□□□□□ -0.83
CHRNA4-218ENST00000637243 SCAF1Q9H7N4 1312 aaKnown RBP9.85□□□□□ -0.83
CHRNA4-218ENST00000637243 CLIP1P30622 1438 aa9.85□□□□□ -0.83
CHRNA4-218ENST00000637243 CDK11AQ9UQ88 783 aaPredicted RBP9.85□□□□□ -0.83
CHRNA4-218ENST00000637243 HNRNPMP52272 730 aaKnown RBP eCLIP9.84□□□□□ -0.83
CHRNA4-218ENST00000637243 A2MP01023 1474 aa9.84□□□□□ -0.83
CHRNA4-218ENST00000637243 EHMT2Q96KQ7 1210 aa9.83□□□□□ -0.84
CHRNA4-218ENST00000637243 GPATCH8Q9UKJ3 1502 aaKnown RBP9.82□□□□□ -0.84
CHRNA4-218ENST00000637243 TOM1O60784 492 aa9.82□□□□□ -0.84
CHRNA4-218ENST00000637243 FBXO31Q5XUX0 539 aaPredicted RBP9.82□□□□□ -0.84
CHRNA4-218ENST00000637243 SPAG9O60271 1321 aaKnown RBP9.82□□□□□ -0.84
CHRNA4-218ENST00000637243 GGT6Q6P531 493 aa9.81□□□□□ -0.84
CHRNA4-218ENST00000637243 XIRP1Q702N8 1843 aaKnown RBP9.81□□□□□ -0.84
CHRNA4-218ENST00000637243 ADGBQ8N7X0 1667 aa9.8□□□□□ -0.84
CHRNA4-218ENST00000637243 PHF23Q9BUL5 403 aaPredicted RBP9.8□□□□□ -0.84
CHRNA4-218ENST00000637243 LRRC7Q96NW7 1537 aa9.8□□□□□ -0.84
CHRNA4-218ENST00000637243 CASKIN1Q8WXD9 1431 aa9.8□□□□□ -0.84
CHRNA4-218ENST00000637243 MED14O60244 1454 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms