RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 RPRD2Q5VT52 1461 aaKnown RBP22.51■■□□□ 1.19
CHRNA7-221ENST00000636898 MYT1Q01538 1121 aa22.5■■□□□ 1.19
CHRNA7-221ENST00000636898 ANKRD30BQ9BXX2 1392 aa22.5■■□□□ 1.19
CHRNA7-221ENST00000636898 SYNJ2O15056 1496 aa22.5■■□□□ 1.19
CHRNA7-221ENST00000636898 ADCY10Q96PN6 1610 aa22.49■■□□□ 1.19
CHRNA7-221ENST00000636898 CEP170Q5SW79 1584 aa22.48■■□□□ 1.19
CHRNA7-221ENST00000636898 HSPA5P11021 654 aaKnown RBP22.48■■□□□ 1.19
CHRNA7-221ENST00000636898 EIF4G2P78344 907 aaKnown RBP eCLIP22.48■■□□□ 1.19
CHRNA7-221ENST00000636898 WASHC2AQ641Q2 1341 aa22.47■■□□□ 1.19
CHRNA7-221ENST00000636898 L3MBTL2Q969R5 705 aa22.46■■□□□ 1.19
CHRNA7-221ENST00000636898 ADGBQ8N7X0 1667 aa22.45■■□□□ 1.18
CHRNA7-221ENST00000636898 TEX14Q8IWB6 1497 aa22.45■■□□□ 1.18
CHRNA7-221ENST00000636898 ERCC6Q03468 1493 aa22.44■■□□□ 1.18
CHRNA7-221ENST00000636898 CAMSAP2Q08AD1 1489 aa22.44■■□□□ 1.18
CHRNA7-221ENST00000636898 ZNF644Q9H582 1327 aaPredicted RBP22.44■■□□□ 1.18
CHRNA7-221ENST00000636898 PRG4Q92954 1404 aaPredicted RBP22.43■■□□□ 1.18
CHRNA7-221ENST00000636898 NUP160Q12769 1436 aa22.42■■□□□ 1.18
CHRNA7-221ENST00000636898 CARMIL2Q6F5E8 1435 aa22.42■■□□□ 1.18
CHRNA7-221ENST00000636898 GPATCH8Q9UKJ3 1502 aaKnown RBP22.42■■□□□ 1.18
CHRNA7-221ENST00000636898 CHMP7Q8WUX9 453 aaPredicted RBP22.42■■□□□ 1.18
CHRNA7-221ENST00000636898 ADGRL2O95490 1459 aa22.41■■□□□ 1.18
CHRNA7-221ENST00000636898 PLB1Q6P1J6 1458 aa22.41■■□□□ 1.18
CHRNA7-221ENST00000636898 CROCC2H7BZ55 1655 aa22.4■■□□□ 1.18
CHRNA7-221ENST00000636898 NCOA1Q15788 1441 aa22.4■■□□□ 1.18
CHRNA7-221ENST00000636898 CNTLNQ9NXG0 1405 aa22.4■■□□□ 1.18
CHRNA7-221ENST00000636898 FKBP8Q14318 412 aa22.4■■□□□ 1.18
CHRNA7-221ENST00000636898 FOXD1Q16676 465 aa22.39■■□□□ 1.17
CHRNA7-221ENST00000636898 NEFLP07196 543 aa22.38■■□□□ 1.17
CHRNA7-221ENST00000636898 CFDP1Q9UEE9 299 aaPredicted RBP22.38■■□□□ 1.17
CHRNA7-221ENST00000636898 SLC4A1APQ9BWU0 796 aaKnown RBP22.38■■□□□ 1.17
CHRNA7-221ENST00000636898 KIF14Q15058 1648 aa22.37■■□□□ 1.17
CHRNA7-221ENST00000636898 PZPP20742 1482 aa22.37■■□□□ 1.17
CHRNA7-221ENST00000636898 POLR1AO95602 1720 aaPredicted RBP22.36■■□□□ 1.17
CHRNA7-221ENST00000636898 TSHZ2Q9NRE2 1034 aa22.35■■□□□ 1.17
CHRNA7-221ENST00000636898 CCDC7Q96M83 1385 aa22.34■■□□□ 1.17
CHRNA7-221ENST00000636898 SPATA31E1Q6ZUB1 1445 aa22.33■■□□□ 1.17
CHRNA7-221ENST00000636898 JPH4Q96JJ6 628 aa22.32■■□□□ 1.16
CHRNA7-221ENST00000636898 ABCA8O94911 1581 aa22.32■■□□□ 1.16
CHRNA7-221ENST00000636898 NBPF8Q3BBV2 869 aa22.31■■□□□ 1.16
CHRNA7-221ENST00000636898 ANKRD30AQ9BXX3 1397 aa22.3■■□□□ 1.16
CHRNA7-221ENST00000636898 KIAA1107Q9UPP5 1409 aa22.29■■□□□ 1.16
CHRNA7-221ENST00000636898 SHANK2Q9UPX8 1470 aa22.29■■□□□ 1.16
CHRNA7-221ENST00000636898 MBD5Q9P267 1494 aa22.28■■□□□ 1.16
CHRNA7-221ENST00000636898 CDC42BPAQ5VT25 1732 aa22.28■■□□□ 1.16
CHRNA7-221ENST00000636898 C11orf95C9JLR9 678 aaPredicted RBP22.26■■□□□ 1.15
CHRNA7-221ENST00000636898 BCANQ96GW7 911 aa22.26■■□□□ 1.15
CHRNA7-221ENST00000636898 ABCC10Q5T3U5 1492 aa22.26■■□□□ 1.15
CHRNA7-221ENST00000636898 HNRNPUQ00839 825 aaKnown RBP eCLIP22.25■■□□□ 1.15
CHRNA7-221ENST00000636898 FBLN2P98095 1184 aa22.24■■□□□ 1.15
CHRNA7-221ENST00000636898 ANKRD50Q9ULJ7 1429 aa22.23■■□□□ 1.15
CHRNA7-221ENST00000636898 PLEKHD1A6NEE1 506 aa22.23■■□□□ 1.15
CHRNA7-221ENST00000636898 PRKRIP1Q9H875 184 aaPredicted RBP22.23■■□□□ 1.15
CHRNA7-221ENST00000636898 ATP10BO94823 1461 aa22.22■■□□□ 1.15
CHRNA7-221ENST00000636898 ZNF777Q9ULD5 760 aaPredicted RBP22.21■■□□□ 1.15
CHRNA7-221ENST00000636898 KIF7Q2M1P5 1343 aa22.2■■□□□ 1.14
CHRNA7-221ENST00000636898 KDM5DQ9BY66 1539 aa22.19■■□□□ 1.14
CHRNA7-221ENST00000636898 C9orf84Q5VXU9 1444 aa22.18■■□□□ 1.14
CHRNA7-221ENST00000636898 ARHGEF5Q12774 1597 aa22.17■■□□□ 1.14
CHRNA7-221ENST00000636898 PKD2Q13563 968 aa22.16■■□□□ 1.14
CHRNA7-221ENST00000636898 UHRF1BP1Q6BDS2 1440 aa22.15■■□□□ 1.14
CHRNA7-221ENST00000636898 ARHGEF12Q9NZN5 1544 aa22.14■■□□□ 1.13
CHRNA7-221ENST00000636898 ARID4BQ4LE39 1312 aaPredicted RBP22.13■■□□□ 1.13
CHRNA7-221ENST00000636898 KDM5CP41229 1560 aa22.12■■□□□ 1.13
CHRNA7-221ENST00000636898 CCDC184Q52MB2 194 aa22.11■■□□□ 1.13
CHRNA7-221ENST00000636898 USP47Q96K76 1375 aa22.11■■□□□ 1.13
CHRNA7-221ENST00000636898 NUP155O75694 1391 aa22.1■■□□□ 1.13
CHRNA7-221ENST00000636898 PTPRGP23470 1445 aa22.1■■□□□ 1.13
CHRNA7-221ENST00000636898 TSPY4P0CV99 314 aa22.1■■□□□ 1.13
CHRNA7-221ENST00000636898 TSPY10P0CW01 314 aa22.1■■□□□ 1.13
CHRNA7-221ENST00000636898 ERICH6BQ5W0A0 696 aa22.1■■□□□ 1.13
CHRNA7-221ENST00000636898 RALGAPBQ86X10 1494 aa22.1■■□□□ 1.13
CHRNA7-221ENST00000636898 MRS2Q9HD23 443 aa22.09■■□□□ 1.13
CHRNA7-221ENST00000636898 BCORL1Q5H9F3 1711 aa22.08■■□□□ 1.13
CHRNA7-221ENST00000636898 ZBED9Q6R2W3 1325 aa22.08■■□□□ 1.12
CHRNA7-221ENST00000636898 PREX2Q70Z35 1606 aa22.06■■□□□ 1.12
CHRNA7-221ENST00000636898 KIF15Q9NS87 1388 aa22.06■■□□□ 1.12
CHRNA7-221ENST00000636898 DHX29Q7Z478 1369 aaKnown RBP22.06■■□□□ 1.12
CHRNA7-221ENST00000636898 CCDC141Q6ZP82 1450 aa22.04■■□□□ 1.12
CHRNA7-221ENST00000636898 CDC42BPBQ9Y5S2 1711 aa22.04■■□□□ 1.12
CHRNA7-221ENST00000636898 RSPH4AQ5TD94 716 aa22.03■■□□□ 1.12
CHRNA7-221ENST00000636898 ROCK2O75116 1388 aaKnown RBP22.03■■□□□ 1.12
CHRNA7-221ENST00000636898 SAMD9LQ8IVG5 1584 aa22.03■■□□□ 1.12
CHRNA7-221ENST00000636898 FAM9BQ8IZU0 186 aa22.02■■□□□ 1.11
CHRNA7-221ENST00000636898 HNRNPMP52272 730 aaKnown RBP eCLIP21.99■■□□□ 1.11
CHRNA7-221ENST00000636898 ZNF326Q5BKZ1 582 aaKnown RBP21.99■■□□□ 1.11
CHRNA7-221ENST00000636898 MAST1Q9Y2H9 1570 aa21.98■■□□□ 1.11
CHRNA7-221ENST00000636898 SHROOM2Q13796 1616 aa21.97■■□□□ 1.11
CHRNA7-221ENST00000636898 FAM135AQ9P2D6 1515 aa21.96■■□□□ 1.11
CHRNA7-221ENST00000636898 RBM19Q9Y4C8 960 aaKnown RBP21.95■■□□□ 1.11
CHRNA7-221ENST00000636898 CHD1O14646 1710 aa21.94■■□□□ 1.1
CHRNA7-221ENST00000636898 CARD11Q9BXL7 1154 aa21.94■■□□□ 1.1
CHRNA7-221ENST00000636898 UNC13BO14795 1591 aa21.93■■□□□ 1.1
CHRNA7-221ENST00000636898 PPP4R2Q9NY27 417 aa21.91■■□□□ 1.1
CHRNA7-221ENST00000636898 TTC37Q6PGP7 1564 aa21.9■■□□□ 1.1
CHRNA7-221ENST00000636898 SYCP2Q9BX26 1530 aa21.9■■□□□ 1.1
CHRNA7-221ENST00000636898 PLXNC1O60486 1568 aa21.89■■□□□ 1.1
CHRNA7-221ENST00000636898 KTN1Q86UP2 1357 aaKnown RBP21.89■■□□□ 1.09
CHRNA7-221ENST00000636898 PLEKHH2Q8IVE3 1493 aa21.89■■□□□ 1.09
CHRNA7-221ENST00000636898 IRX6P78412 446 aaPredicted RBP21.89■■□□□ 1.09
CHRNA7-221ENST00000636898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms