RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 ZFYVE16Q7Z3T8 1539 aa26.31■■□□□ 1.8
CACNA1A-229ENST00000636670 PREX1Q8TCU6 1659 aa26.31■■□□□ 1.8
CACNA1A-229ENST00000636670 MAGI2Q86UL8 1455 aa26.3■■□□□ 1.8
CACNA1A-229ENST00000636670 ZMYM4Q5VZL5 1548 aa26.3■■□□□ 1.8
CACNA1A-229ENST00000636670 SIGLEC1Q9BZZ2 1709 aa26.3■■□□□ 1.8
CACNA1A-229ENST00000636670 FMN1Q68DA7 1419 aa26.28■■□□□ 1.8
CACNA1A-229ENST00000636670 STRCQ7RTU9 1775 aa26.28■■□□□ 1.8
CACNA1A-229ENST00000636670 HECW1Q76N89 1606 aa26.27■■□□□ 1.8
CACNA1A-229ENST00000636670 CFAP74Q9C0B2 1584 aa26.25■■□□□ 1.79
CACNA1A-229ENST00000636670 NUP153P49790 1475 aaKnown RBP26.25■■□□□ 1.79
CACNA1A-229ENST00000636670 CLIP1P30622 1438 aa26.24■■□□□ 1.79
CACNA1A-229ENST00000636670 CEBPAP49715 358 aaPredicted RBP26.23■■□□□ 1.79
CACNA1A-229ENST00000636670 PLEKHD1A6NEE1 506 aa26.22■■□□□ 1.79
CACNA1A-229ENST00000636670 ARHGEF12Q9NZN5 1544 aa26.22■■□□□ 1.79
CACNA1A-229ENST00000636670 PTPRTO14522 1441 aa26.22■■□□□ 1.79
CACNA1A-229ENST00000636670 UHRF1BP1Q6BDS2 1440 aa26.2■■□□□ 1.78
CACNA1A-229ENST00000636670 IQSEC2Q5JU85 1478 aa26.18■■□□□ 1.78
CACNA1A-229ENST00000636670 LRRIQ1Q96JM4 1722 aa26.17■■□□□ 1.78
CACNA1A-229ENST00000636670 CEP162Q5TB80 1403 aa26.17■■□□□ 1.78
CACNA1A-229ENST00000636670 ATP10AO60312 1499 aa26.15■■□□□ 1.78
CACNA1A-229ENST00000636670 SETD1BQ9UPS6 1966 aaKnown RBP26.15■■□□□ 1.78
CACNA1A-229ENST00000636670 LTBP4Q8N2S1 1624 aa26.14■■□□□ 1.77
CACNA1A-229ENST00000636670 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.14■■□□□ 1.77
CACNA1A-229ENST00000636670 C9orf84Q5VXU9 1444 aa26.11■■□□□ 1.77
CACNA1A-229ENST00000636670 SCAPERQ9BY12 1400 aa26.1■■□□□ 1.77
CACNA1A-229ENST00000636670 FYCO1Q9BQS8 1478 aa26.1■■□□□ 1.77
CACNA1A-229ENST00000636670 CDK13Q14004 1512 aaKnown RBP26.09■■□□□ 1.77
CACNA1A-229ENST00000636670 CASKIN1Q8WXD9 1431 aa26.07■■□□□ 1.76
CACNA1A-229ENST00000636670 CCDC18Q5T9S5 1454 aa26.04■■□□□ 1.76
CACNA1A-229ENST00000636670 LOC105371045A0A1W2PR82 267 aa26.01■■□□□ 1.75
CACNA1A-229ENST00000636670 PLCH2O75038 1416 aa26■■□□□ 1.75
CACNA1A-229ENST00000636670 UBAP1LF5GYI3 381 aa25.97■■□□□ 1.75
CACNA1A-229ENST00000636670 NCOA1Q15788 1441 aa25.95■■□□□ 1.74
CACNA1A-229ENST00000636670 TRAPPC8Q9Y2L5 1435 aa25.94■■□□□ 1.74
CACNA1A-229ENST00000636670 EFCAB2Q5VUJ9 269 aa25.93■■□□□ 1.74
CACNA1A-229ENST00000636670 KIF14Q15058 1648 aa25.92■■□□□ 1.74
CACNA1A-229ENST00000636670 ESF1Q9H501 851 aaKnown RBP25.91■■□□□ 1.74
CACNA1A-229ENST00000636670 C3P01024 1663 aa25.9■■□□□ 1.74
CACNA1A-229ENST00000636670 ZNF518AQ6AHZ1 1483 aa25.88■■□□□ 1.73
CACNA1A-229ENST00000636670 VPS8Q8N3P4 1428 aa25.88■■□□□ 1.73
CACNA1A-229ENST00000636670 ATP1B4Q9UN42 357 aaPredicted RBP25.87■■□□□ 1.73
CACNA1A-229ENST00000636670 MYO5CQ9NQX4 1742 aa25.87■■□□□ 1.73
CACNA1A-229ENST00000636670 MYT1LQ9UL68 1186 aa25.86■■□□□ 1.73
CACNA1A-229ENST00000636670 TROQ12816 1431 aaPredicted RBP25.86■■□□□ 1.73
CACNA1A-229ENST00000636670 AFAP1Q8N556 730 aa25.85■■□□□ 1.73
CACNA1A-229ENST00000636670 ZNF335Q9H4Z2 1342 aaPredicted RBP25.85■■□□□ 1.73
CACNA1A-229ENST00000636670 REREQ9P2R6 1566 aa25.83■■□□□ 1.73
CACNA1A-229ENST00000636670 CDK11AQ9UQ88 783 aaPredicted RBP25.82■■□□□ 1.72
CACNA1A-229ENST00000636670 KDM5CP41229 1560 aa25.82■■□□□ 1.72
CACNA1A-229ENST00000636670 CAMSAP1Q5T5Y3 1602 aa25.81■■□□□ 1.72
CACNA1A-229ENST00000636670 AGLP35573 1532 aa25.79■■□□□ 1.72
CACNA1A-229ENST00000636670 DIP2CQ9Y2E4 1556 aa25.79■■□□□ 1.72
CACNA1A-229ENST00000636670 MED1Q15648 1581 aaPredicted RBP25.78■■□□□ 1.72
CACNA1A-229ENST00000636670 NCKAP5LQ9HCH0 1330 aa25.78■■□□□ 1.72
CACNA1A-229ENST00000636670 CNTLNQ9NXG0 1405 aa25.78■■□□□ 1.72
CACNA1A-229ENST00000636670 EHBP1L1Q8N3D4 1523 aa25.78■■□□□ 1.72
CACNA1A-229ENST00000636670 TIAM1Q13009 1591 aa25.78■■□□□ 1.72
CACNA1A-229ENST00000636670 PREX2Q70Z35 1606 aa25.74■■□□□ 1.71
CACNA1A-229ENST00000636670 HSPA1LP34931 641 aa25.74■■□□□ 1.71
CACNA1A-229ENST00000636670 MLH3Q9UHC1 1453 aa25.73■■□□□ 1.71
CACNA1A-229ENST00000636670 NPATQ14207 1427 aa25.73■■□□□ 1.71
CACNA1A-229ENST00000636670 PKD2Q13563 968 aa25.73■■□□□ 1.71
CACNA1A-229ENST00000636670 CDC42BPAQ5VT25 1732 aa25.72■■□□□ 1.71
CACNA1A-229ENST00000636670 MAP3K1Q13233 1512 aa25.7■■□□□ 1.7
CACNA1A-229ENST00000636670 CDC42BPBQ9Y5S2 1711 aa25.7■■□□□ 1.7
CACNA1A-229ENST00000636670 ABCA6Q8N139 1617 aa25.7■■□□□ 1.7
CACNA1A-229ENST00000636670 ARHGAP5Q13017 1502 aa25.69■■□□□ 1.7
CACNA1A-229ENST00000636670 SCAF1Q9H7N4 1312 aaKnown RBP25.68■■□□□ 1.7
CACNA1A-229ENST00000636670 PHF23Q9BUL5 403 aaPredicted RBP25.68■■□□□ 1.7
CACNA1A-229ENST00000636670 SUPT6HQ7KZ85 1726 aaKnown RBP25.67■■□□□ 1.7
CACNA1A-229ENST00000636670 PLA2R1Q13018 1463 aa25.66■■□□□ 1.7
CACNA1A-229ENST00000636670 TOM1O60784 492 aa25.66■■□□□ 1.7
CACNA1A-229ENST00000636670 PIP4K2BP78356 416 aa25.66■■□□□ 1.7
CACNA1A-229ENST00000636670 ITSN2Q9NZM3 1697 aa25.66■■□□□ 1.7
CACNA1A-229ENST00000636670 ZMYM3Q14202 1370 aa25.65■■□□□ 1.7
CACNA1A-229ENST00000636670 MTUS2Q5JR59 1369 aa25.65■■□□□ 1.7
CACNA1A-229ENST00000636670 PPP6R1Q9UPN7 881 aa25.63■■□□□ 1.69
CACNA1A-229ENST00000636670 TCOF1Q13428 1488 aaKnown RBP25.62■■□□□ 1.69
CACNA1A-229ENST00000636670 MROH2AA6NES4 1674 aa25.61■■□□□ 1.69
CACNA1A-229ENST00000636670 LRRC9Q6ZRR7 1453 aa25.57■■□□□ 1.68
CACNA1A-229ENST00000636670 ZNF142P52746 1687 aaPredicted RBP25.55■■□□□ 1.68
CACNA1A-229ENST00000636670 CEP170BQ9Y4F5 1589 aaPredicted RBP25.53■■□□□ 1.68
CACNA1A-229ENST00000636670 ABCC1P33527 1531 aa25.53■■□□□ 1.68
CACNA1A-229ENST00000636670 MYO3AQ8NEV4 1616 aa25.52■■□□□ 1.68
CACNA1A-229ENST00000636670 KIDINS220Q9ULH0 1771 aa25.52■■□□□ 1.68
CACNA1A-229ENST00000636670 CPS1P31327 1500 aa25.52■■□□□ 1.68
CACNA1A-229ENST00000636670 GPATCH8Q9UKJ3 1502 aaKnown RBP25.51■■□□□ 1.67
CACNA1A-229ENST00000636670 NCOA2Q15596 1464 aa25.5■■□□□ 1.67
CACNA1A-229ENST00000636670 SAMD9LQ8IVG5 1584 aa25.5■■□□□ 1.67
CACNA1A-229ENST00000636670 PTPRKQ15262 1439 aa25.48■■□□□ 1.67
CACNA1A-229ENST00000636670 CCNB3Q8WWL7 1395 aa25.46■■□□□ 1.67
CACNA1A-229ENST00000636670 SHANK2Q9UPX8 1470 aa25.44■■□□□ 1.66
CACNA1A-229ENST00000636670 CLTCQ00610 1675 aaKnown RBP25.43■■□□□ 1.66
CACNA1A-229ENST00000636670 APLP2Q06481 763 aa25.4■■□□□ 1.66
CACNA1A-229ENST00000636670 SYCP2Q9BX26 1530 aa25.4■■□□□ 1.66
CACNA1A-229ENST00000636670 PLEKHH2Q8IVE3 1493 aa25.4■■□□□ 1.66
CACNA1A-229ENST00000636670 A2ML1A8K2U0 1454 aa25.39■■□□□ 1.65
CACNA1A-229ENST00000636670 DNMT1P26358 1616 aaKnown RBP25.37■■□□□ 1.65
CACNA1A-229ENST00000636670 SPAG9O60271 1321 aaKnown RBP25.37■■□□□ 1.65
CACNA1A-229ENST00000636670 GGT6Q6P531 493 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms