RNA–Protein interactions for RNA: ENST00000636507.1

CACNB4-227, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 4,688 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-227ENST00000636507 CHMP4BQ9H444 224 aaKnown RBP6.76□□□□□ -1.33
CACNB4-227ENST00000636507 ITSN2Q9NZM3 1697 aa6.76□□□□□ -1.33
CACNB4-227ENST00000636507 ABCA10Q8WWZ4 1543 aa6.76□□□□□ -1.33
CACNB4-227ENST00000636507 UBE2Q2Q8WVN8 375 aa6.76□□□□□ -1.33
CACNB4-227ENST00000636507 KIF15Q9NS87 1388 aa6.76□□□□□ -1.33
CACNB4-227ENST00000636507 NCBP3Q53F19 620 aaKnown RBP6.76□□□□□ -1.33
CACNB4-227ENST00000636507 LAMC1P11047 1609 aa6.76□□□□□ -1.33
CACNB4-227ENST00000636507 EIF2AK4Q9P2K8 1649 aaKnown RBP6.75□□□□□ -1.33
CACNB4-227ENST00000636507 CDCA8Q53HL2 280 aa6.75□□□□□ -1.33
CACNB4-227ENST00000636507 RNF123Q5XPI4 1314 aa6.75□□□□□ -1.33
CACNB4-227ENST00000636507 MTUS2Q5JR59 1369 aa6.75□□□□□ -1.33
CACNB4-227ENST00000636507 BICRAQ9NZM4 1560 aa6.75□□□□□ -1.33
CACNB4-227ENST00000636507 UPF2Q9HAU5 1272 aaKnown RBP6.75□□□□□ -1.33
CACNB4-227ENST00000636507 NCOA1Q15788 1441 aa6.74□□□□□ -1.33
CACNB4-227ENST00000636507 CCDC136Q96JN2 1154 aa6.74□□□□□ -1.33
CACNB4-227ENST00000636507 KIF14Q15058 1648 aa6.74□□□□□ -1.33
CACNB4-227ENST00000636507 SAMD9Q5K651 1589 aa6.74□□□□□ -1.33
CACNB4-227ENST00000636507 SNAPC4Q5SXM2 1469 aa6.74□□□□□ -1.33
CACNB4-227ENST00000636507 ADGBQ8N7X0 1667 aa6.73□□□□□ -1.33
CACNB4-227ENST00000636507 DHX29Q7Z478 1369 aaKnown RBP6.73□□□□□ -1.33
CACNB4-227ENST00000636507 HNRNPUQ00839 825 aaKnown RBP eCLIP6.73□□□□□ -1.33
CACNB4-227ENST00000636507 NESP48681 1621 aa6.73□□□□□ -1.33
CACNB4-227ENST00000636507 YEATS2Q9ULM3 1422 aa6.73□□□□□ -1.33
CACNB4-227ENST00000636507 ANP32BQ92688 251 aaKnown RBP6.73□□□□□ -1.33
CACNB4-227ENST00000636507 TRIM44Q96DX7 344 aaPredicted RBP6.73□□□□□ -1.33
CACNB4-227ENST00000636507 ERCC6Q03468 1493 aa6.72□□□□□ -1.33
CACNB4-227ENST00000636507 SHANK2Q9UPX8 1470 aa6.72□□□□□ -1.33
CACNB4-227ENST00000636507 PCF11O94913 1555 aaKnown RBP6.72□□□□□ -1.33
CACNB4-227ENST00000636507 ARHGEF11O15085 1522 aa6.72□□□□□ -1.33
CACNB4-227ENST00000636507 UGGT2Q9NYU1 1516 aa6.72□□□□□ -1.33
CACNB4-227ENST00000636507 POLA1P09884 1462 aaPredicted RBP6.72□□□□□ -1.33
CACNB4-227ENST00000636507 NUP160Q12769 1436 aa6.72□□□□□ -1.33
CACNB4-227ENST00000636507 RSPH4AQ5TD94 716 aa6.71□□□□□ -1.33
CACNB4-227ENST00000636507 TERF1P54274 439 aa6.71□□□□□ -1.33
CACNB4-227ENST00000636507 IQGAP2Q13576 1575 aa6.71□□□□□ -1.34
CACNB4-227ENST00000636507 TPM2P07951 284 aa6.71□□□□□ -1.34
CACNB4-227ENST00000636507 CCDC7Q96M83 1385 aa6.71□□□□□ -1.34
CACNB4-227ENST00000636507 UHRF1BP1Q6BDS2 1440 aa6.7□□□□□ -1.34
CACNB4-227ENST00000636507 MAPK8IP3Q9UPT6 1336 aa6.7□□□□□ -1.34
CACNB4-227ENST00000636507 SKOR2Q2VWA4 1001 aaPredicted RBP6.7□□□□□ -1.34
CACNB4-227ENST00000636507 RPRD2Q5VT52 1461 aaKnown RBP6.69□□□□□ -1.34
CACNB4-227ENST00000636507 CLASP1Q7Z460 1538 aa6.69□□□□□ -1.34
CACNB4-227ENST00000636507 CADPSQ9ULU8 1353 aa6.69□□□□□ -1.34
CACNB4-227ENST00000636507 KDM5DQ9BY66 1539 aa6.69□□□□□ -1.34
CACNB4-227ENST00000636507 LAMC3Q9Y6N6 1575 aa6.69□□□□□ -1.34
CACNB4-227ENST00000636507 DDX10Q13206 875 aaKnown RBP6.69□□□□□ -1.34
CACNB4-227ENST00000636507 GAPVD1Q14C86 1478 aa6.69□□□□□ -1.34
CACNB4-227ENST00000636507 RRP9O43818 475 aaKnown RBP6.68□□□□□ -1.34
CACNB4-227ENST00000636507 CENPQQ7L2Z9 268 aaPredicted RBP6.68□□□□□ -1.34
CACNB4-227ENST00000636507 ADGRL2O95490 1459 aa6.68□□□□□ -1.34
CACNB4-227ENST00000636507 RUSC2Q8N2Y8 1516 aa6.68□□□□□ -1.34
CACNB4-227ENST00000636507 RALGAPBQ86X10 1494 aa6.68□□□□□ -1.34
CACNB4-227ENST00000636507 GRIN2BQ13224 1484 aa6.68□□□□□ -1.34
CACNB4-227ENST00000636507 CCDC141Q6ZP82 1450 aa6.67□□□□□ -1.34
CACNB4-227ENST00000636507 IGF1RP08069 1367 aa6.67□□□□□ -1.34
CACNB4-227ENST00000636507 MYBBP1AQ9BQG0 1328 aaKnown RBP6.67□□□□□ -1.34
CACNB4-227ENST00000636507 NEFMP07197 916 aa6.67□□□□□ -1.34
CACNB4-227ENST00000636507 REREQ9P2R6 1566 aa6.67□□□□□ -1.34
CACNB4-227ENST00000636507 GSE1Q14687 1217 aa6.67□□□□□ -1.34
CACNB4-227ENST00000636507 MRS2Q9HD23 443 aa6.67□□□□□ -1.34
CACNB4-227ENST00000636507 FAM50AQ14320 339 aaKnown RBP6.67□□□□□ -1.34
CACNB4-227ENST00000636507 DNMT1P26358 1616 aaKnown RBP6.66□□□□□ -1.34
CACNB4-227ENST00000636507 CENPJQ9HC77 1338 aaPredicted RBP6.66□□□□□ -1.34
CACNB4-227ENST00000636507 EHMT2Q96KQ7 1210 aa6.66□□□□□ -1.34
CACNB4-227ENST00000636507 LAS1LQ9Y4W2 734 aaKnown RBP6.66□□□□□ -1.34
CACNB4-227ENST00000636507 TNNT2P45379 298 aaPredicted RBP6.66□□□□□ -1.34
CACNB4-227ENST00000636507 TAF3Q5VWG9 929 aa6.66□□□□□ -1.34
CACNB4-227ENST00000636507 NAIPQ13075 1403 aa6.65□□□□□ -1.34
CACNB4-227ENST00000636507 KIF16BQ96L93 1317 aa6.65□□□□□ -1.34
CACNB4-227ENST00000636507 DDX11L8A8MPP1 907 aa6.65□□□□□ -1.34
CACNB4-227ENST00000636507 PRKRIP1Q9H875 184 aaPredicted RBP6.65□□□□□ -1.35
CACNB4-227ENST00000636507 NEURL4Q96JN8 1562 aa6.64□□□□□ -1.35
CACNB4-227ENST00000636507 ADCY10Q96PN6 1610 aa6.64□□□□□ -1.35
CACNB4-227ENST00000636507 GOLGA6L22H0YM25 854 aa6.64□□□□□ -1.35
CACNB4-227ENST00000636507 CT47B1P0C2W7 299 aaPredicted RBP6.64□□□□□ -1.35
CACNB4-227ENST00000636507 PRKCSHP14314 528 aaPredicted RBP6.64□□□□□ -1.35
CACNB4-227ENST00000636507 ATAD2Q6PL18 1390 aa6.63□□□□□ -1.35
CACNB4-227ENST00000636507 NPC1L1Q9UHC9 1359 aa6.63□□□□□ -1.35
CACNB4-227ENST00000636507 CSPP1Q1MSJ5 1256 aa6.63□□□□□ -1.35
CACNB4-227ENST00000636507 ZNF326Q5BKZ1 582 aaKnown RBP6.63□□□□□ -1.35
CACNB4-227ENST00000636507 FAM193AP78312 1265 aa6.63□□□□□ -1.35
CACNB4-227ENST00000636507 NLRP13Q86W25 1043 aa6.62□□□□□ -1.35
CACNB4-227ENST00000636507 CIZ1Q9ULV3 898 aaPredicted RBP6.62□□□□□ -1.35
CACNB4-227ENST00000636507 CGNL1Q0VF96 1302 aa6.62□□□□□ -1.35
CACNB4-227ENST00000636507 KIAA1107Q9UPP5 1409 aa6.62□□□□□ -1.35
CACNB4-227ENST00000636507 FAM161AQ3B820 660 aa6.62□□□□□ -1.35
CACNB4-227ENST00000636507 PDS5BQ9NTI5 1447 aa6.62□□□□□ -1.35
CACNB4-227ENST00000636507 UHRF1BP1LA0JNW5 1464 aa6.62□□□□□ -1.35
CACNB4-227ENST00000636507 HSP90AA1P07900 732 aaKnown RBP6.62□□□□□ -1.35
CACNB4-227ENST00000636507 PMFBP1Q8TBY8 1022 aa6.62□□□□□ -1.35
CACNB4-227ENST00000636507 HS1BP3Q53T59 392 aa6.61□□□□□ -1.35
CACNB4-227ENST00000636507 TMC1Q8TDI8 760 aa6.61□□□□□ -1.35
CACNB4-227ENST00000636507 IBTKQ9P2D0 1353 aaPredicted RBP6.61□□□□□ -1.35
CACNB4-227ENST00000636507 MCM5P33992 734 aa6.61□□□□□ -1.35
CACNB4-227ENST00000636507 LRPPRCP42704 1394 aaKnown RBP6.61□□□□□ -1.35
CACNB4-227ENST00000636507 PTPRGP23470 1445 aa6.61□□□□□ -1.35
CACNB4-227ENST00000636507 RRP1P56182 461 aaKnown RBP6.6□□□□□ -1.35
CACNB4-227ENST00000636507 PLXNC1O60486 1568 aa6.6□□□□□ -1.35
CACNB4-227ENST00000636507 ARHGEF5Q12774 1597 aa6.6□□□□□ -1.35
CACNB4-227ENST00000636507 GOLGA6L3A6NEY3 463 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms