RNA–Protein interactions for RNA: ENST00000636400.2

TCF4-278, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,343 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-278ENST00000636400 PPP4R2Q9NY27 417 aa8.74□□□□□ -1.01
TCF4-278ENST00000636400 RAB3GAP2Q9H2M9 1393 aa8.73□□□□□ -1.01
TCF4-278ENST00000636400 NUP155O75694 1391 aa8.73□□□□□ -1.01
TCF4-278ENST00000636400 HDGFL2Q7Z4V5 671 aaPredicted RBP8.73□□□□□ -1.01
TCF4-278ENST00000636400 IPO8O15397 1037 aaKnown RBP8.72□□□□□ -1.01
TCF4-278ENST00000636400 ZBTB7CA1YPR0 619 aa8.72□□□□□ -1.01
TCF4-278ENST00000636400 HDAC5Q9UQL6 1122 aa8.72□□□□□ -1.01
TCF4-278ENST00000636400 HIRIP3Q9BW71 556 aaPredicted RBP8.72□□□□□ -1.01
TCF4-278ENST00000636400 SRPK2P78362 688 aaKnown RBP8.72□□□□□ -1.01
TCF4-278ENST00000636400 FGD5Q6ZNL6 1462 aa8.72□□□□□ -1.01
TCF4-278ENST00000636400 GOLGA6L6A8MZA4 724 aa8.71□□□□□ -1.01
TCF4-278ENST00000636400 MCCP23508 829 aa8.71□□□□□ -1.02
TCF4-278ENST00000636400 TDRD9Q8NDG6 1382 aaKnown RBP8.7□□□□□ -1.02
TCF4-278ENST00000636400 NRDCO43847 1150 aa8.7□□□□□ -1.02
TCF4-278ENST00000636400 CCDC144AA2RUR9 1427 aa8.7□□□□□ -1.02
TCF4-278ENST00000636400 CC2D2AQ9P2K1 1620 aa8.7□□□□□ -1.02
TCF4-278ENST00000636400 MORC1Q86VD1 984 aa8.7□□□□□ -1.02
TCF4-278ENST00000636400 CTTNBP2Q8WZ74 1663 aa8.7□□□□□ -1.02
TCF4-278ENST00000636400 FYCO1Q9BQS8 1478 aa8.69□□□□□ -1.02
TCF4-278ENST00000636400 NBR1Q14596 966 aa8.69□□□□□ -1.02
TCF4-278ENST00000636400 RTF1Q92541 710 aaKnown RBP8.69□□□□□ -1.02
TCF4-278ENST00000636400 PTMSP20962 102 aa8.69□□□□□ -1.02
TCF4-278ENST00000636400 GOLGA2Q08379 1002 aa8.69□□□□□ -1.02
TCF4-278ENST00000636400 PKD2Q13563 968 aa8.69□□□□□ -1.02
TCF4-278ENST00000636400 TERF2IPQ9NYB0 399 aa8.69□□□□□ -1.02
TCF4-278ENST00000636400 CFAP65Q6ZU64 1925 aaKnown RBP8.69□□□□□ -1.02
TCF4-278ENST00000636400 NPHP1O15259 732 aa8.69□□□□□ -1.02
TCF4-278ENST00000636400 FHOD3Q2V2M9 1422 aa8.69□□□□□ -1.02
TCF4-278ENST00000636400 OS9Q13438 667 aaPredicted RBP8.68□□□□□ -1.02
TCF4-278ENST00000636400 SUPT16HQ9Y5B9 1047 aaKnown RBP8.68□□□□□ -1.02
TCF4-278ENST00000636400 U2SURPO15042 1029 aaKnown RBP8.68□□□□□ -1.02
TCF4-278ENST00000636400 MPHOSPH9Q99550 1183 aa8.68□□□□□ -1.02
TCF4-278ENST00000636400 NCAPD3P42695 1498 aa8.68□□□□□ -1.02
TCF4-278ENST00000636400 SPAG9O60271 1321 aaKnown RBP8.68□□□□□ -1.02
TCF4-278ENST00000636400 LAS1LQ9Y4W2 734 aaKnown RBP8.67□□□□□ -1.02
TCF4-278ENST00000636400 LAMC3Q9Y6N6 1575 aa8.67□□□□□ -1.02
TCF4-278ENST00000636400 DNMBPQ6XZF7 1577 aa8.67□□□□□ -1.02
TCF4-278ENST00000636400 CC2D1BQ5T0F9 858 aaKnown RBP8.67□□□□□ -1.02
TCF4-278ENST00000636400 EID1Q9Y6B2 187 aa8.67□□□□□ -1.02
TCF4-278ENST00000636400 MYOM3Q5VTT5 1437 aa8.67□□□□□ -1.02
TCF4-278ENST00000636400 SIN3AQ96ST3 1273 aa8.66□□□□□ -1.02
TCF4-278ENST00000636400 FGD1P98174 961 aa8.66□□□□□ -1.02
TCF4-278ENST00000636400 LMOD2Q6P5Q4 547 aa8.66□□□□□ -1.02
TCF4-278ENST00000636400 EHBP1L1Q8N3D4 1523 aa8.66□□□□□ -1.02
TCF4-278ENST00000636400 KCNJ4P48050 445 aa8.65□□□□□ -1.02
TCF4-278ENST00000636400 LMOD3Q0VAK6 560 aa8.65□□□□□ -1.02
TCF4-278ENST00000636400 KIF21AQ7Z4S6 1674 aa8.65□□□□□ -1.02
TCF4-278ENST00000636400 KIF15Q9NS87 1388 aa8.65□□□□□ -1.03
TCF4-278ENST00000636400 STAC3Q96MF2 364 aa8.65□□□□□ -1.03
TCF4-278ENST00000636400 ITSN2Q9NZM3 1697 aa8.65□□□□□ -1.03
TCF4-278ENST00000636400 TRHP20396 242 aaPredicted RBP8.64□□□□□ -1.03
TCF4-278ENST00000636400 HSCBQ8IWL3 235 aa8.64□□□□□ -1.03
TCF4-278ENST00000636400 FRAT1Q92837 279 aaPredicted RBP8.64□□□□□ -1.03
TCF4-278ENST00000636400 IRX6P78412 446 aaPredicted RBP8.64□□□□□ -1.03
TCF4-278ENST00000636400 ARXQ96QS3 562 aa8.64□□□□□ -1.03
TCF4-278ENST00000636400 HSP90AB1P08238 724 aaKnown RBP8.64□□□□□ -1.03
TCF4-278ENST00000636400 GRIN2BQ13224 1484 aa8.64□□□□□ -1.03
TCF4-278ENST00000636400 NEUROD2Q15784 382 aa8.63□□□□□ -1.03
TCF4-278ENST00000636400 PTMAP06454 111 aaKnown RBP8.63□□□□□ -1.03
TCF4-278ENST00000636400 GGT6Q6P531 493 aa8.63□□□□□ -1.03
TCF4-278ENST00000636400 GPATCH3Q96I76 525 aa8.63□□□□□ -1.03
TCF4-278ENST00000636400 JPH4Q96JJ6 628 aa8.63□□□□□ -1.03
TCF4-278ENST00000636400 SYNJ1O43426 1573 aa8.63□□□□□ -1.03
TCF4-278ENST00000636400 WASHC2CQ9Y4E1 1318 aa8.63□□□□□ -1.03
TCF4-278ENST00000636400 PTPRGP23470 1445 aa8.62□□□□□ -1.03
TCF4-278ENST00000636400 TNNT2P45379 298 aaPredicted RBP8.62□□□□□ -1.03
TCF4-278ENST00000636400 PDE3BQ13370 1112 aa8.62□□□□□ -1.03
TCF4-278ENST00000636400 NGEFQ8N5V2 710 aa8.62□□□□□ -1.03
TCF4-278ENST00000636400 KIAA1211Q6ZU35 1233 aa8.61□□□□□ -1.03
TCF4-278ENST00000636400 SYNJ2O15056 1496 aa8.61□□□□□ -1.03
TCF4-278ENST00000636400 PLEKHH2Q8IVE3 1493 aa8.61□□□□□ -1.03
TCF4-278ENST00000636400 NLRP13Q86W25 1043 aa8.61□□□□□ -1.03
TCF4-278ENST00000636400 L1TD1Q5T7N2 865 aaKnown RBP8.61□□□□□ -1.03
TCF4-278ENST00000636400 CASKIN1Q8WXD9 1431 aa8.61□□□□□ -1.03
TCF4-278ENST00000636400 CFTRP13569 1480 aa8.61□□□□□ -1.03
TCF4-278ENST00000636400 SCAPERQ9BY12 1400 aa8.6□□□□□ -1.03
TCF4-278ENST00000636400 ARHGAP5Q13017 1502 aa8.6□□□□□ -1.03
TCF4-278ENST00000636400 MRC2Q9UBG0 1479 aa8.6□□□□□ -1.03
TCF4-278ENST00000636400 HSPA5P11021 654 aaKnown RBP8.6□□□□□ -1.03
TCF4-278ENST00000636400 GOLGA6L4A6NEF3 574 aa8.6□□□□□ -1.03
TCF4-278ENST00000636400 NOP58Q9Y2X3 529 aaKnown RBP8.6□□□□□ -1.03
TCF4-278ENST00000636400 RRBP1Q9P2E9 1410 aaKnown RBP8.6□□□□□ -1.03
TCF4-278ENST00000636400 PMFBP1Q8TBY8 1022 aa8.6□□□□□ -1.03
TCF4-278ENST00000636400 LRRC9Q6ZRR7 1453 aa8.6□□□□□ -1.03
TCF4-278ENST00000636400 KANK4Q5T7N3 995 aaPredicted RBP8.59□□□□□ -1.03
TCF4-278ENST00000636400 RWDD1Q9H446 243 aaPredicted RBP8.59□□□□□ -1.03
TCF4-278ENST00000636400 KIF3BO15066 747 aa8.59□□□□□ -1.03
TCF4-278ENST00000636400 HMMRO75330 724 aa8.59□□□□□ -1.03
TCF4-278ENST00000636400 CHAF1AQ13111 956 aaPredicted RBP8.59□□□□□ -1.03
TCF4-278ENST00000636400 BIVM-ERCC5R4GMW8 1640 aa8.59□□□□□ -1.03
TCF4-278ENST00000636400 HTATSF1O43719 755 aaKnown RBP8.59□□□□□ -1.03
TCF4-278ENST00000636400 CCDC34Q96HJ3 373 aa8.59□□□□□ -1.03
TCF4-278ENST00000636400 CGNL1Q0VF96 1302 aa8.58□□□□□ -1.04
TCF4-278ENST00000636400 IQGAP2Q13576 1575 aa8.58□□□□□ -1.04
TCF4-278ENST00000636400 PLEKHG5O94827 1062 aa8.58□□□□□ -1.04
TCF4-278ENST00000636400 STK31Q9BXU1 1019 aa8.58□□□□□ -1.04
TCF4-278ENST00000636400 RCAN3Q9UKA8 241 aa8.58□□□□□ -1.04
TCF4-278ENST00000636400 FGD6Q6ZV73 1430 aa8.58□□□□□ -1.04
TCF4-278ENST00000636400 IFT140Q96RY7 1462 aa8.58□□□□□ -1.04
TCF4-278ENST00000636400 RGS3P49796 1198 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms