RNA–Protein interactions for RNA: ENST00000636116.1

SYNGAP1-211, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-211ENST00000636116 ZMYM4Q5VZL5 1548 aa12.42□□□□□ -0.42
SYNGAP1-211ENST00000636116 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-211ENST00000636116 PLCH2O75038 1416 aa12.42□□□□□ -0.42
SYNGAP1-211ENST00000636116 EFCAB5A4FU69 1503 aa12.42□□□□□ -0.42
SYNGAP1-211ENST00000636116 MAGI2Q86UL8 1455 aa12.41□□□□□ -0.42
SYNGAP1-211ENST00000636116 EFCAB2Q5VUJ9 269 aa12.41□□□□□ -0.42
SYNGAP1-211ENST00000636116 CERKQ8TCT0 537 aa12.41□□□□□ -0.42
SYNGAP1-211ENST00000636116 AFAP1Q8N556 730 aa12.39□□□□□ -0.43
SYNGAP1-211ENST00000636116 ATP10AO60312 1499 aa12.39□□□□□ -0.43
SYNGAP1-211ENST00000636116 MYT1LQ9UL68 1186 aa12.37□□□□□ -0.43
SYNGAP1-211ENST00000636116 FER1L4A9Z1Z3 1794 aa12.36□□□□□ -0.43
SYNGAP1-211ENST00000636116 CDK11AQ9UQ88 783 aaPredicted RBP12.36□□□□□ -0.43
SYNGAP1-211ENST00000636116 C9orf84Q5VXU9 1444 aa12.35□□□□□ -0.43
SYNGAP1-211ENST00000636116 ARHGAP35Q9NRY4 1499 aa12.34□□□□□ -0.43
SYNGAP1-211ENST00000636116 ARHGEF12Q9NZN5 1544 aa12.34□□□□□ -0.43
SYNGAP1-211ENST00000636116 FMN1Q68DA7 1419 aa12.34□□□□□ -0.43
SYNGAP1-211ENST00000636116 KIF14Q15058 1648 aa12.33□□□□□ -0.43
SYNGAP1-211ENST00000636116 MYO5CQ9NQX4 1742 aa12.32□□□□□ -0.44
SYNGAP1-211ENST00000636116 ARHGAP5Q13017 1502 aa12.32□□□□□ -0.44
SYNGAP1-211ENST00000636116 TROQ12816 1431 aaPredicted RBP12.31□□□□□ -0.44
SYNGAP1-211ENST00000636116 ZNF518AQ6AHZ1 1483 aa12.3□□□□□ -0.44
SYNGAP1-211ENST00000636116 DMRT2Q9Y5R5 561 aa12.29□□□□□ -0.44
SYNGAP1-211ENST00000636116 PREX1Q8TCU6 1659 aa12.29□□□□□ -0.44
SYNGAP1-211ENST00000636116 CHIC1Q5VXU3 224 aa12.28□□□□□ -0.44
SYNGAP1-211ENST00000636116 STRCQ7RTU9 1775 aa12.28□□□□□ -0.44
SYNGAP1-211ENST00000636116 CLIP1P30622 1438 aa12.28□□□□□ -0.44
SYNGAP1-211ENST00000636116 TRAPPC8Q9Y2L5 1435 aa12.28□□□□□ -0.44
SYNGAP1-211ENST00000636116 ESF1Q9H501 851 aaKnown RBP12.27□□□□□ -0.45
SYNGAP1-211ENST00000636116 LRRIQ1Q96JM4 1722 aa12.27□□□□□ -0.45
SYNGAP1-211ENST00000636116 UHRF1BP1Q6BDS2 1440 aa12.27□□□□□ -0.45
SYNGAP1-211ENST00000636116 KDM5CP41229 1560 aa12.26□□□□□ -0.45
SYNGAP1-211ENST00000636116 DIP2CQ9Y2E4 1556 aa12.26□□□□□ -0.45
SYNGAP1-211ENST00000636116 SETD1BQ9UPS6 1966 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-211ENST00000636116 ILDR2Q71H61 639 aa12.25□□□□□ -0.45
SYNGAP1-211ENST00000636116 CDC42BPBQ9Y5S2 1711 aa12.25□□□□□ -0.45
SYNGAP1-211ENST00000636116 DISP3Q9P2K9 1392 aa12.24□□□□□ -0.45
SYNGAP1-211ENST00000636116 MLH3Q9UHC1 1453 aa12.24□□□□□ -0.45
SYNGAP1-211ENST00000636116 ZNF777Q9ULD5 760 aaPredicted RBP12.24□□□□□ -0.45
SYNGAP1-211ENST00000636116 ABCA6Q8N139 1617 aa12.23□□□□□ -0.45
SYNGAP1-211ENST00000636116 C3P01024 1663 aa12.22□□□□□ -0.45
SYNGAP1-211ENST00000636116 HNRNPMP52272 730 aaKnown RBP eCLIP12.21□□□□□ -0.45
SYNGAP1-211ENST00000636116 REREQ9P2R6 1566 aa12.21□□□□□ -0.46
SYNGAP1-211ENST00000636116 PTPRTO14522 1441 aa12.2□□□□□ -0.46
SYNGAP1-211ENST00000636116 CASKIN1Q8WXD9 1431 aa12.2□□□□□ -0.46
SYNGAP1-211ENST00000636116 PREX2Q70Z35 1606 aa12.2□□□□□ -0.46
SYNGAP1-211ENST00000636116 ABCC1P33527 1531 aa12.2□□□□□ -0.46
SYNGAP1-211ENST00000636116 AGLP35573 1532 aa12.2□□□□□ -0.46
SYNGAP1-211ENST00000636116 KIDINS220Q9ULH0 1771 aa12.19□□□□□ -0.46
SYNGAP1-211ENST00000636116 ITSN2Q9NZM3 1697 aa12.18□□□□□ -0.46
SYNGAP1-211ENST00000636116 SPAG9O60271 1321 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-211ENST00000636116 NCKAP5LQ9HCH0 1330 aa12.17□□□□□ -0.46
SYNGAP1-211ENST00000636116 CCDC18Q5T9S5 1454 aa12.17□□□□□ -0.46
SYNGAP1-211ENST00000636116 CDC42BPAQ5VT25 1732 aa12.17□□□□□ -0.46
SYNGAP1-211ENST00000636116 ZMYM3Q14202 1370 aa12.17□□□□□ -0.46
SYNGAP1-211ENST00000636116 LTBP4Q8N2S1 1624 aa12.16□□□□□ -0.46
SYNGAP1-211ENST00000636116 NCOA1Q15788 1441 aa12.16□□□□□ -0.46
SYNGAP1-211ENST00000636116 SAMD9LQ8IVG5 1584 aa12.16□□□□□ -0.46
SYNGAP1-211ENST00000636116 CNTLNQ9NXG0 1405 aa12.15□□□□□ -0.46
SYNGAP1-211ENST00000636116 SOCS7O14512 581 aa12.15□□□□□ -0.46
SYNGAP1-211ENST00000636116 GPATCH8Q9UKJ3 1502 aaKnown RBP12.15□□□□□ -0.46
SYNGAP1-211ENST00000636116 GGT6Q6P531 493 aa12.14□□□□□ -0.47
SYNGAP1-211ENST00000636116 CFDP1Q9UEE9 299 aaPredicted RBP12.14□□□□□ -0.47
SYNGAP1-211ENST00000636116 ZNF335Q9H4Z2 1342 aaPredicted RBP12.13□□□□□ -0.47
SYNGAP1-211ENST00000636116 SYCP2Q9BX26 1530 aa12.13□□□□□ -0.47
SYNGAP1-211ENST00000636116 CAMSAP1Q5T5Y3 1602 aa12.13□□□□□ -0.47
SYNGAP1-211ENST00000636116 SUPT6HQ7KZ85 1726 aaKnown RBP12.12□□□□□ -0.47
SYNGAP1-211ENST00000636116 FYCO1Q9BQS8 1478 aa12.12□□□□□ -0.47
SYNGAP1-211ENST00000636116 ZNF644Q9H582 1327 aaPredicted RBP12.11□□□□□ -0.47
SYNGAP1-211ENST00000636116 NPATQ14207 1427 aa12.11□□□□□ -0.47
SYNGAP1-211ENST00000636116 CCNB3Q8WWL7 1395 aa12.1□□□□□ -0.47
SYNGAP1-211ENST00000636116 UBAP1LF5GYI3 381 aa12.1□□□□□ -0.47
SYNGAP1-211ENST00000636116 A2MP01023 1474 aa12.09□□□□□ -0.47
SYNGAP1-211ENST00000636116 ATP7AQ04656 1500 aa12.09□□□□□ -0.47
SYNGAP1-211ENST00000636116 KIAA1107Q9UPP5 1409 aa12.09□□□□□ -0.47
SYNGAP1-211ENST00000636116 CLTCQ00610 1675 aaKnown RBP12.09□□□□□ -0.47
SYNGAP1-211ENST00000636116 MROH2AA6NES4 1674 aa12.08□□□□□ -0.48
SYNGAP1-211ENST00000636116 PTPRKQ15262 1439 aa12.08□□□□□ -0.48
SYNGAP1-211ENST00000636116 SPATA31D1Q6ZQQ2 1576 aa12.08□□□□□ -0.48
SYNGAP1-211ENST00000636116 PKD2Q13563 968 aa12.07□□□□□ -0.48
SYNGAP1-211ENST00000636116 IQSEC2Q5JU85 1478 aa12.07□□□□□ -0.48
SYNGAP1-211ENST00000636116 MTUS2Q5JR59 1369 aa12.06□□□□□ -0.48
SYNGAP1-211ENST00000636116 PLEKHH2Q8IVE3 1493 aa12.06□□□□□ -0.48
SYNGAP1-211ENST00000636116 INO80Q9ULG1 1556 aaPredicted RBP12.05□□□□□ -0.48
SYNGAP1-211ENST00000636116 FBXO31Q5XUX0 539 aaPredicted RBP12.05□□□□□ -0.48
SYNGAP1-211ENST00000636116 PLXNC1O60486 1568 aa12.05□□□□□ -0.48
SYNGAP1-211ENST00000636116 PPP6R1Q9UPN7 881 aa12.04□□□□□ -0.48
SYNGAP1-211ENST00000636116 CEP170BQ9Y4F5 1589 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-211ENST00000636116 MYO3AQ8NEV4 1616 aa12.04□□□□□ -0.48
SYNGAP1-211ENST00000636116 TCOF1Q13428 1488 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-211ENST00000636116 PLA2R1Q13018 1463 aa12.02□□□□□ -0.48
SYNGAP1-211ENST00000636116 MBD5Q9P267 1494 aa12.02□□□□□ -0.48
SYNGAP1-211ENST00000636116 KIF3BO15066 747 aa12.02□□□□□ -0.49
SYNGAP1-211ENST00000636116 SCAF1Q9H7N4 1312 aaKnown RBP12.02□□□□□ -0.49
SYNGAP1-211ENST00000636116 ZNF142P52746 1687 aaPredicted RBP12.01□□□□□ -0.49
SYNGAP1-211ENST00000636116 PIP4K2BP78356 416 aa12.01□□□□□ -0.49
SYNGAP1-211ENST00000636116 DHX29Q7Z478 1369 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-211ENST00000636116 A2ML1A8K2U0 1454 aa12.01□□□□□ -0.49
SYNGAP1-211ENST00000636116 TIAM1Q13009 1591 aa12□□□□□ -0.49
SYNGAP1-211ENST00000636116 ADGBQ8N7X0 1667 aa12□□□□□ -0.49
SYNGAP1-211ENST00000636116 HSPA1LP34931 641 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms