RNA–Protein interactions for RNA: ENST00000635990.2

TCF4-277, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,396 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-277ENST00000635990 NUTM2AQ8IVF1 878 aaPredicted RBP8.3□□□□□ -1.08
TCF4-277ENST00000635990 FRAT1Q92837 279 aaPredicted RBP8.3□□□□□ -1.08
TCF4-277ENST00000635990 BAZ1AQ9NRL2 1556 aaPredicted RBP8.3□□□□□ -1.08
TCF4-277ENST00000635990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.3□□□□□ -1.08
TCF4-277ENST00000635990 GTF3C3Q9Y5Q9 886 aa8.29□□□□□ -1.08
TCF4-277ENST00000635990 CEP164Q9UPV0 1460 aa8.29□□□□□ -1.08
TCF4-277ENST00000635990 GOLGA3Q08378 1498 aa8.29□□□□□ -1.08
TCF4-277ENST00000635990 FGD1P98174 961 aa8.29□□□□□ -1.08
TCF4-277ENST00000635990 ANP32BQ92688 251 aaKnown RBP8.29□□□□□ -1.08
TCF4-277ENST00000635990 CCDC136Q96JN2 1154 aa8.29□□□□□ -1.08
TCF4-277ENST00000635990 WIZO95785 1651 aa8.29□□□□□ -1.08
TCF4-277ENST00000635990 ABCC8Q09428 1581 aa8.29□□□□□ -1.08
TCF4-277ENST00000635990 EFCAB2Q5VUJ9 269 aa8.28□□□□□ -1.08
TCF4-277ENST00000635990 HDGFL2Q7Z4V5 671 aaPredicted RBP8.28□□□□□ -1.08
TCF4-277ENST00000635990 JPH4Q96JJ6 628 aa8.28□□□□□ -1.08
TCF4-277ENST00000635990 KCNJ4P48050 445 aa8.27□□□□□ -1.08
TCF4-277ENST00000635990 DCAF1Q9Y4B6 1507 aa8.27□□□□□ -1.09
TCF4-277ENST00000635990 APBB1O00213 710 aa8.27□□□□□ -1.09
TCF4-277ENST00000635990 TAF7LQ5H9L4 462 aa8.27□□□□□ -1.09
TCF4-277ENST00000635990 FBXW7Q969H0 707 aa8.27□□□□□ -1.09
TCF4-277ENST00000635990 MORC1Q86VD1 984 aa8.26□□□□□ -1.09
TCF4-277ENST00000635990 AMPHP49418 695 aa8.26□□□□□ -1.09
TCF4-277ENST00000635990 SIN3AQ96ST3 1273 aa8.26□□□□□ -1.09
TCF4-277ENST00000635990 SF3B2Q13435 895 aaKnown RBP8.26□□□□□ -1.09
TCF4-277ENST00000635990 NGEFQ8N5V2 710 aa8.26□□□□□ -1.09
TCF4-277ENST00000635990 SPAG9O60271 1321 aaKnown RBP8.26□□□□□ -1.09
TCF4-277ENST00000635990 USP35Q9P2H5 1018 aa8.26□□□□□ -1.09
TCF4-277ENST00000635990 FRAT2O75474 233 aaPredicted RBP8.25□□□□□ -1.09
TCF4-277ENST00000635990 ATF3P18847 181 aa8.25□□□□□ -1.09
TCF4-277ENST00000635990 PSME1Q06323 249 aa8.24□□□□□ -1.09
TCF4-277ENST00000635990 ANO8Q9HCE9 1232 aaPredicted RBP8.24□□□□□ -1.09
TCF4-277ENST00000635990 CASC1Q6TDU7 716 aa8.24□□□□□ -1.09
TCF4-277ENST00000635990 TMF1P82094 1093 aa8.23□□□□□ -1.09
TCF4-277ENST00000635990 CEP162Q5TB80 1403 aa8.23□□□□□ -1.09
TCF4-277ENST00000635990 PKD2Q13563 968 aa8.22□□□□□ -1.09
TCF4-277ENST00000635990 NBR1Q14596 966 aa8.22□□□□□ -1.09
TCF4-277ENST00000635990 PNNQ9H307 717 aaKnown RBP8.22□□□□□ -1.09
TCF4-277ENST00000635990 TRAK1Q9UPV9 953 aa8.22□□□□□ -1.09
TCF4-277ENST00000635990 NUTM2GQ5VZR2 741 aa8.21□□□□□ -1.09
TCF4-277ENST00000635990 RAD21O60216 631 aa8.21□□□□□ -1.1
TCF4-277ENST00000635990 NCLP19338 710 aaKnown RBP8.21□□□□□ -1.1
TCF4-277ENST00000635990 GORABQ5T7V8 394 aa8.21□□□□□ -1.1
TCF4-277ENST00000635990 ZRSR1Q15695 479 aaKnown RBP8.21□□□□□ -1.1
TCF4-277ENST00000635990 CCDC88BA6NC98 1476 aa8.19□□□□□ -1.1
TCF4-277ENST00000635990 SAMD1Q6SPF0 538 aaPredicted RBP8.18□□□□□ -1.1
TCF4-277ENST00000635990 VPS53Q5VIR6 699 aa8.18□□□□□ -1.1
TCF4-277ENST00000635990 CWC22Q9HCG8 908 aaKnown RBP8.18□□□□□ -1.1
TCF4-277ENST00000635990 PRM3Q9NNZ6 103 aa8.18□□□□□ -1.1
TCF4-277ENST00000635990 NUP155O75694 1391 aa8.18□□□□□ -1.1
TCF4-277ENST00000635990 ROCK2O75116 1388 aaKnown RBP8.17□□□□□ -1.1
TCF4-277ENST00000635990 FHAD1B1AJZ9 1412 aa8.17□□□□□ -1.1
TCF4-277ENST00000635990 STRN4Q9NRL3 753 aa8.17□□□□□ -1.1
TCF4-277ENST00000635990 MROH2BQ7Z745 1585 aa8.17□□□□□ -1.1
TCF4-277ENST00000635990 FANCD2Q9BXW9 1451 aa8.17□□□□□ -1.1
TCF4-277ENST00000635990 U2AF1L5P0DN76 240 aaPredicted RBP8.17□□□□□ -1.1
TCF4-277ENST00000635990 U2AF1Q01081 240 aaKnown RBP eCLIP8.17□□□□□ -1.1
TCF4-277ENST00000635990 EEA1Q15075 1411 aa8.16□□□□□ -1.1
TCF4-277ENST00000635990 SLC4A10Q6U841 1118 aa8.16□□□□□ -1.1
TCF4-277ENST00000635990 C1orf141Q5JVX7 400 aa8.16□□□□□ -1.1
TCF4-277ENST00000635990 KRI1Q8N9T8 703 aaKnown RBP8.16□□□□□ -1.1
TCF4-277ENST00000635990 ARHGAP35Q9NRY4 1499 aa8.15□□□□□ -1.1
TCF4-277ENST00000635990 MINK1Q8N4C8 1332 aaPredicted RBP8.15□□□□□ -1.1
TCF4-277ENST00000635990 PTPRGP23470 1445 aa8.15□□□□□ -1.1
TCF4-277ENST00000635990 GNL2Q13823 731 aaKnown RBP8.15□□□□□ -1.11
TCF4-277ENST00000635990 NECTIN2Q92692 538 aa8.15□□□□□ -1.11
TCF4-277ENST00000635990 RGS3P49796 1198 aa8.13□□□□□ -1.11
TCF4-277ENST00000635990 TRIM34Q9BYJ4 488 aa8.13□□□□□ -1.11
TCF4-277ENST00000635990 CADPSQ9ULU8 1353 aa8.13□□□□□ -1.11
TCF4-277ENST00000635990 PLCB2Q00722 1185 aa8.13□□□□□ -1.11
TCF4-277ENST00000635990 FHOD3Q2V2M9 1422 aa8.13□□□□□ -1.11
TCF4-277ENST00000635990 FAM177BA6PVY3 158 aa8.13□□□□□ -1.11
TCF4-277ENST00000635990 PDE4CQ08493 712 aa8.13□□□□□ -1.11
TCF4-277ENST00000635990 ESCO1Q5FWF5 840 aa8.12□□□□□ -1.11
TCF4-277ENST00000635990 TOMM22Q9NS69 142 aa8.12□□□□□ -1.11
TCF4-277ENST00000635990 TERF2IPQ9NYB0 399 aa8.11□□□□□ -1.11
TCF4-277ENST00000635990 PROSER2Q86WR7 435 aaPredicted RBP8.11□□□□□ -1.11
TCF4-277ENST00000635990 CTDP1Q9Y5B0 961 aaPredicted RBP8.11□□□□□ -1.11
TCF4-277ENST00000635990 CCDC146Q8IYE0 955 aa8.11□□□□□ -1.11
TCF4-277ENST00000635990 ANKRD30AQ9BXX3 1397 aa8.1□□□□□ -1.11
TCF4-277ENST00000635990 EIF2S2P20042 333 aaKnown RBP8.1□□□□□ -1.11
TCF4-277ENST00000635990 AQRO60306 1485 aaKnown RBP eCLIP8.1□□□□□ -1.11
TCF4-277ENST00000635990 CC2D2AQ9P2K1 1620 aa8.1□□□□□ -1.11
TCF4-277ENST00000635990 B4GALNT3Q6L9W6 998 aa8.1□□□□□ -1.11
TCF4-277ENST00000635990 TTC5Q8N0Z6 440 aa8.1□□□□□ -1.11
TCF4-277ENST00000635990 ZNF428Q96B54 188 aa8.1□□□□□ -1.11
TCF4-277ENST00000635990 GLIPR1L2Q4G1C9 344 aa8.09□□□□□ -1.11
TCF4-277ENST00000635990 VPS37DQ86XT2 251 aa8.09□□□□□ -1.11
TCF4-277ENST00000635990 WWC1Q8IX03 1113 aa8.09□□□□□ -1.11
TCF4-277ENST00000635990 SPRYD3Q8NCJ5 442 aa8.09□□□□□ -1.11
TCF4-277ENST00000635990 STK31Q9BXU1 1019 aa8.09□□□□□ -1.11
TCF4-277ENST00000635990 CNKSR2Q8WXI2 1034 aa8.08□□□□□ -1.12
TCF4-277ENST00000635990 KANK4Q5T7N3 995 aaPredicted RBP8.08□□□□□ -1.12
TCF4-277ENST00000635990 MIER1Q8N108 512 aa8.08□□□□□ -1.12
TCF4-277ENST00000635990 MPHOSPH9Q99550 1183 aa8.08□□□□□ -1.12
TCF4-277ENST00000635990 COG3Q96JB2 828 aa8.08□□□□□ -1.12
TCF4-277ENST00000635990 RAD54L2Q9Y4B4 1467 aa8.07□□□□□ -1.12
TCF4-277ENST00000635990 XPCQ01831 940 aaPredicted RBP8.07□□□□□ -1.12
TCF4-277ENST00000635990 PMFBP1Q8TBY8 1022 aa8.07□□□□□ -1.12
TCF4-277ENST00000635990 NLRP2Q9NX02 1062 aa8.07□□□□□ -1.12
TCF4-277ENST00000635990 TRIM6-TRIM34B2RNG4 842 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms