RNA–Protein interactions for RNA: ENST00000635023.1

PATJ-214, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 5

Gene PATJ, Length 5,242 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-214ENST00000635023 RTF1Q92541 710 aaKnown RBP11.81□□□□□ -0.52
PATJ-214ENST00000635023 CCDC70Q6NSX1 233 aa11.81□□□□□ -0.52
PATJ-214ENST00000635023 RWDD1Q9H446 243 aaPredicted RBP11.8□□□□□ -0.52
PATJ-214ENST00000635023 RASSF8Q8NHQ8 419 aa11.79□□□□□ -0.52
PATJ-214ENST00000635023 TCERG1O14776 1098 aaKnown RBP11.79□□□□□ -0.52
PATJ-214ENST00000635023 CHMP7Q8WUX9 453 aaPredicted RBP11.79□□□□□ -0.52
PATJ-214ENST00000635023 GPATCH3Q96I76 525 aa11.79□□□□□ -0.52
PATJ-214ENST00000635023 TSR1Q2NL82 804 aaKnown RBP11.79□□□□□ -0.52
PATJ-214ENST00000635023 TMF1P82094 1093 aa11.78□□□□□ -0.52
PATJ-214ENST00000635023 RRP12Q5JTH9 1297 aaKnown RBP11.76□□□□□ -0.53
PATJ-214ENST00000635023 B4GALNT3Q6L9W6 998 aa11.76□□□□□ -0.53
PATJ-214ENST00000635023 SPRYD3Q8NCJ5 442 aa11.76□□□□□ -0.53
PATJ-214ENST00000635023 TPM1P09493 284 aa11.75□□□□□ -0.53
PATJ-214ENST00000635023 HSP90B1P14625 803 aaKnown RBP11.75□□□□□ -0.53
PATJ-214ENST00000635023 TPM2P07951 284 aa11.74□□□□□ -0.53
PATJ-214ENST00000635023 GORABQ5T7V8 394 aa11.74□□□□□ -0.53
PATJ-214ENST00000635023 HMMRO75330 724 aa11.74□□□□□ -0.53
PATJ-214ENST00000635023 ABCC9O60706 1549 aa11.74□□□□□ -0.53
PATJ-214ENST00000635023 PDE4CQ08493 712 aa11.73□□□□□ -0.53
PATJ-214ENST00000635023 ARID3AQ99856 593 aa11.73□□□□□ -0.53
PATJ-214ENST00000635023 HSP90AA2PQ14568 343 aaPredicted RBP11.73□□□□□ -0.53
PATJ-214ENST00000635023 PMFBP1Q8TBY8 1022 aa11.73□□□□□ -0.53
PATJ-214ENST00000635023 KCNH8Q96L42 1107 aa11.73□□□□□ -0.53
PATJ-214ENST00000635023 CDR1P51861 262 aa11.73□□□□□ -0.53
PATJ-214ENST00000635023 CFDP1Q9UEE9 299 aaPredicted RBP11.73□□□□□ -0.53
PATJ-214ENST00000635023 MORC1Q86VD1 984 aa11.72□□□□□ -0.53
PATJ-214ENST00000635023 SENP3Q9H4L4 574 aaPredicted RBP11.72□□□□□ -0.53
PATJ-214ENST00000635023 MARCH6O60337 910 aa11.72□□□□□ -0.53
PATJ-214ENST00000635023 CC2D1BQ5T0F9 858 aaKnown RBP11.72□□□□□ -0.53
PATJ-214ENST00000635023 RSPH6AQ9H0K4 717 aa11.72□□□□□ -0.53
PATJ-214ENST00000635023 GZF1Q9H116 711 aaPredicted RBP11.72□□□□□ -0.53
PATJ-214ENST00000635023 SF3A1Q15459 793 aaKnown RBP11.71□□□□□ -0.53
PATJ-214ENST00000635023 CLIP1P30622 1438 aa11.71□□□□□ -0.53
PATJ-214ENST00000635023 CCER2I3L3R5 266 aa11.71□□□□□ -0.54
PATJ-214ENST00000635023 TPD52L1Q16890 204 aaPredicted RBP11.7□□□□□ -0.54
PATJ-214ENST00000635023 TEX35Q5T0J7 233 aa11.7□□□□□ -0.54
PATJ-214ENST00000635023 ATP6V1DQ9Y5K8 247 aa11.7□□□□□ -0.54
PATJ-214ENST00000635023 IPO7O95373 1038 aaKnown RBP11.7□□□□□ -0.54
PATJ-214ENST00000635023 TIMELESSQ9UNS1 1208 aa11.7□□□□□ -0.54
PATJ-214ENST00000635023 KIF16BQ96L93 1317 aa11.69□□□□□ -0.54
PATJ-214ENST00000635023 STK31Q9BXU1 1019 aa11.69□□□□□ -0.54
PATJ-214ENST00000635023 DDX11L8A8MPP1 907 aa11.69□□□□□ -0.54
PATJ-214ENST00000635023 ST18O60284 1047 aa11.69□□□□□ -0.54
PATJ-214ENST00000635023 CREBRFQ8IUR6 639 aa11.69□□□□□ -0.54
PATJ-214ENST00000635023 KRI1Q8N9T8 703 aaKnown RBP11.69□□□□□ -0.54
PATJ-214ENST00000635023 SLKQ9H2G2 1235 aaPredicted RBP11.68□□□□□ -0.54
PATJ-214ENST00000635023 TAF7LQ5H9L4 462 aa11.68□□□□□ -0.54
PATJ-214ENST00000635023 GOLGA6L19H0YKK7 550 aa11.68□□□□□ -0.54
PATJ-214ENST00000635023 HDGFL2Q7Z4V5 671 aaPredicted RBP11.68□□□□□ -0.54
PATJ-214ENST00000635023 SENP3-EIF4A1A0A087X0R7 540 aa11.67□□□□□ -0.54
PATJ-214ENST00000635023 RBM19Q9Y4C8 960 aaKnown RBP11.67□□□□□ -0.54
PATJ-214ENST00000635023 APBB1O00213 710 aa11.67□□□□□ -0.54
PATJ-214ENST00000635023 SKOR2Q2VWA4 1001 aaPredicted RBP11.67□□□□□ -0.54
PATJ-214ENST00000635023 KANK1Q14678 1352 aa11.66□□□□□ -0.54
PATJ-214ENST00000635023 SRPK2P78362 688 aaKnown RBP11.66□□□□□ -0.54
PATJ-214ENST00000635023 CCDC47Q96A33 483 aaKnown RBP11.66□□□□□ -0.54
PATJ-214ENST00000635023 NOM1Q5C9Z4 860 aaKnown RBP11.66□□□□□ -0.54
PATJ-214ENST00000635023 BECN2A8MW95 431 aa11.66□□□□□ -0.54
PATJ-214ENST00000635023 ITPRIPQ8IWB1 547 aa11.66□□□□□ -0.54
PATJ-214ENST00000635023 ANKRD20A12PQ8NF67 263 aa11.65□□□□□ -0.54
PATJ-214ENST00000635023 ACBD3Q9H3P7 528 aa11.65□□□□□ -0.54
PATJ-214ENST00000635023 SPAG9O60271 1321 aaKnown RBP11.65□□□□□ -0.54
PATJ-214ENST00000635023 G3V3G9 751 aa11.65□□□□□ -0.54
PATJ-214ENST00000635023 PES1O00541 588 aaKnown RBP11.65□□□□□ -0.54
PATJ-214ENST00000635023 DCAF8Q5TAQ9 597 aa11.65□□□□□ -0.54
PATJ-214ENST00000635023 CCAR2Q8N163 923 aaKnown RBP11.65□□□□□ -0.54
PATJ-214ENST00000635023 ZNF771Q7L3S4 317 aaPredicted RBP11.64□□□□□ -0.55
PATJ-214ENST00000635023 TRIM6-TRIM34B2RNG4 842 aa11.64□□□□□ -0.55
PATJ-214ENST00000635023 PATL2C9JE40 543 aaKnown RBP11.64□□□□□ -0.55
PATJ-214ENST00000635023 KTN1Q86UP2 1357 aaKnown RBP11.63□□□□□ -0.55
PATJ-214ENST00000635023 VPS53Q5VIR6 699 aa11.63□□□□□ -0.55
PATJ-214ENST00000635023 AKAP17AQ02040 695 aaKnown RBP11.63□□□□□ -0.55
PATJ-214ENST00000635023 CPLX2Q6PUV4 134 aaKnown RBP11.63□□□□□ -0.55
PATJ-214ENST00000635023 MFAP1P55081 439 aaKnown RBP11.63□□□□□ -0.55
PATJ-214ENST00000635023 RCAN3Q9UKA8 241 aa11.63□□□□□ -0.55
PATJ-214ENST00000635023 AK7Q96M32 723 aa11.62□□□□□ -0.55
PATJ-214ENST00000635023 IPO9Q96P70 1041 aaKnown RBP11.62□□□□□ -0.55
PATJ-214ENST00000635023 EEA1Q15075 1411 aa11.62□□□□□ -0.55
PATJ-214ENST00000635023 H3BQV1 296 aa11.62□□□□□ -0.55
PATJ-214ENST00000635023 IFFO2Q5TF58 517 aa11.62□□□□□ -0.55
PATJ-214ENST00000635023 LRRFIP1Q32MZ4 808 aaKnown RBP11.61□□□□□ -0.55
PATJ-214ENST00000635023 CCDC191Q8NCU4 936 aa11.61□□□□□ -0.55
PATJ-214ENST00000635023 TOMM22Q9NS69 142 aa11.61□□□□□ -0.55
PATJ-214ENST00000635023 DCTN1Q14203 1278 aa11.61□□□□□ -0.55
PATJ-214ENST00000635023 CSB-PGBD3P0DP91 1061 aa11.61□□□□□ -0.55
PATJ-214ENST00000635023 LMOD3Q0VAK6 560 aa11.61□□□□□ -0.55
PATJ-214ENST00000635023 FAM184AQ8NB25 1140 aa11.6□□□□□ -0.55
PATJ-214ENST00000635023 RUFY1Q96T51 708 aa11.6□□□□□ -0.55
PATJ-214ENST00000635023 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.6□□□□□ -0.55
PATJ-214ENST00000635023 ARGLU1Q9NWB6 273 aaPredicted RBP11.6□□□□□ -0.55
PATJ-214ENST00000635023 HOOK1Q9UJC3 728 aaKnown RBP11.6□□□□□ -0.55
PATJ-214ENST00000635023 CHMP3Q9Y3E7 222 aa11.6□□□□□ -0.55
PATJ-214ENST00000635023 RALBP1Q15311 655 aa11.6□□□□□ -0.55
PATJ-214ENST00000635023 SYNE3Q6ZMZ3 975 aa11.6□□□□□ -0.55
PATJ-214ENST00000635023 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.59□□□□□ -0.55
PATJ-214ENST00000635023 ZNF330Q9Y3S2 320 aaPredicted RBP11.59□□□□□ -0.55
PATJ-214ENST00000635023 U2AF1L5P0DN76 240 aaPredicted RBP11.59□□□□□ -0.55
PATJ-214ENST00000635023 U2AF1Q01081 240 aaKnown RBP eCLIP11.59□□□□□ -0.55
PATJ-214ENST00000635023 TCEAL9Q9UHQ7 104 aa11.58□□□□□ -0.56
PATJ-214ENST00000635023 SOX12O15370 315 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms