RNA–Protein interactions for RNA: ENST00000634819.1

LINC01398-202, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 5 BASIC

Gene LINC01398, Length 1,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-202ENST00000634819 PTPRTO14522 1441 aa20.75■□□□□ 0.91
LINC01398-202ENST00000634819 RAPGEF6Q8TEU7 1601 aa20.75■□□□□ 0.91
LINC01398-202ENST00000634819 PRXQ9BXM0 1461 aa20.74■□□□□ 0.91
LINC01398-202ENST00000634819 CFAP74Q9C0B2 1584 aa20.73■□□□□ 0.91
LINC01398-202ENST00000634819 LTBP4Q8N2S1 1624 aa20.73■□□□□ 0.91
LINC01398-202ENST00000634819 UHRF1BP1Q6BDS2 1440 aa20.72■□□□□ 0.91
LINC01398-202ENST00000634819 HECW1Q76N89 1606 aa20.72■□□□□ 0.91
LINC01398-202ENST00000634819 NUP153P49790 1475 aaKnown RBP20.72■□□□□ 0.91
LINC01398-202ENST00000634819 IQSEC2Q5JU85 1478 aa20.71■□□□□ 0.91
LINC01398-202ENST00000634819 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.69■□□□□ 0.9
LINC01398-202ENST00000634819 PLEKHD1A6NEE1 506 aa20.68■□□□□ 0.9
LINC01398-202ENST00000634819 ATP10AO60312 1499 aa20.67■□□□□ 0.9
LINC01398-202ENST00000634819 SAMD9Q5K651 1589 aa20.67■□□□□ 0.9
LINC01398-202ENST00000634819 CSRNP3Q8WYN3 585 aa20.66■□□□□ 0.9
LINC01398-202ENST00000634819 C9orf84Q5VXU9 1444 aa20.66■□□□□ 0.9
LINC01398-202ENST00000634819 SCAPERQ9BY12 1400 aa20.64■□□□□ 0.89
LINC01398-202ENST00000634819 NCOA1Q15788 1441 aa20.56■□□□□ 0.88
LINC01398-202ENST00000634819 PLCH2O75038 1416 aa20.55■□□□□ 0.88
LINC01398-202ENST00000634819 UBAP1LF5GYI3 381 aa20.55■□□□□ 0.88
LINC01398-202ENST00000634819 SETD1BQ9UPS6 1966 aaKnown RBP20.51■□□□□ 0.87
LINC01398-202ENST00000634819 TRAPPC8Q9Y2L5 1435 aa20.51■□□□□ 0.87
LINC01398-202ENST00000634819 C3P01024 1663 aa20.5■□□□□ 0.87
LINC01398-202ENST00000634819 ZNF335Q9H4Z2 1342 aaPredicted RBP20.49■□□□□ 0.87
LINC01398-202ENST00000634819 MED1Q15648 1581 aaPredicted RBP20.46■□□□□ 0.87
LINC01398-202ENST00000634819 ZNF518AQ6AHZ1 1483 aa20.46■□□□□ 0.87
LINC01398-202ENST00000634819 EFCAB2Q5VUJ9 269 aa20.46■□□□□ 0.87
LINC01398-202ENST00000634819 RANGAP1P46060 587 aaPredicted RBP20.45■□□□□ 0.86
LINC01398-202ENST00000634819 REREQ9P2R6 1566 aa20.44■□□□□ 0.86
LINC01398-202ENST00000634819 AFAP1Q8N556 730 aa20.44■□□□□ 0.86
LINC01398-202ENST00000634819 CAMSAP1Q5T5Y3 1602 aa20.44■□□□□ 0.86
LINC01398-202ENST00000634819 KDM5CP41229 1560 aa20.43■□□□□ 0.86
LINC01398-202ENST00000634819 DIP2CQ9Y2E4 1556 aa20.43■□□□□ 0.86
LINC01398-202ENST00000634819 NCKAP5LQ9HCH0 1330 aa20.43■□□□□ 0.86
LINC01398-202ENST00000634819 CDK13Q14004 1512 aaKnown RBP20.43■□□□□ 0.86
LINC01398-202ENST00000634819 ESF1Q9H501 851 aaKnown RBP20.42■□□□□ 0.86
LINC01398-202ENST00000634819 HSPA1LP34931 641 aa20.41■□□□□ 0.86
LINC01398-202ENST00000634819 MYT1LQ9UL68 1186 aa20.4■□□□□ 0.86
LINC01398-202ENST00000634819 AGLP35573 1532 aa20.38■□□□□ 0.85
LINC01398-202ENST00000634819 ABCA6Q8N139 1617 aa20.36■□□□□ 0.85
LINC01398-202ENST00000634819 CNTLNQ9NXG0 1405 aa20.36■□□□□ 0.85
LINC01398-202ENST00000634819 MYO5CQ9NQX4 1742 aa20.35■□□□□ 0.85
LINC01398-202ENST00000634819 MLH3Q9UHC1 1453 aa20.35■□□□□ 0.85
LINC01398-202ENST00000634819 NPATQ14207 1427 aa20.35■□□□□ 0.85
LINC01398-202ENST00000634819 SCAF1Q9H7N4 1312 aaKnown RBP20.33■□□□□ 0.85
LINC01398-202ENST00000634819 PIP4K2BP78356 416 aa20.32■□□□□ 0.84
LINC01398-202ENST00000634819 PKD2Q13563 968 aa20.32■□□□□ 0.84
LINC01398-202ENST00000634819 ARHGAP5Q13017 1502 aa20.32■□□□□ 0.84
LINC01398-202ENST00000634819 UBTFP17480 764 aaKnown RBP20.31■□□□□ 0.84
LINC01398-202ENST00000634819 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
LINC01398-202ENST00000634819 PLA2R1Q13018 1463 aa20.3■□□□□ 0.84
LINC01398-202ENST00000634819 EHMT2Q96KQ7 1210 aa20.3■□□□□ 0.84
LINC01398-202ENST00000634819 TCOF1Q13428 1488 aaKnown RBP20.3■□□□□ 0.84
LINC01398-202ENST00000634819 KIF14Q15058 1648 aa20.28■□□□□ 0.84
LINC01398-202ENST00000634819 ZMYM3Q14202 1370 aa20.28■□□□□ 0.84
LINC01398-202ENST00000634819 TOM1O60784 492 aa20.26■□□□□ 0.83
LINC01398-202ENST00000634819 PPP6R1Q9UPN7 881 aa20.26■□□□□ 0.83
LINC01398-202ENST00000634819 MROH2AA6NES4 1674 aa20.24■□□□□ 0.83
LINC01398-202ENST00000634819 CDK11AQ9UQ88 783 aaPredicted RBP20.22■□□□□ 0.83
LINC01398-202ENST00000634819 MYO3AQ8NEV4 1616 aa20.22■□□□□ 0.83
LINC01398-202ENST00000634819 ZNF142P52746 1687 aaPredicted RBP20.22■□□□□ 0.83
LINC01398-202ENST00000634819 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
LINC01398-202ENST00000634819 ATP1B4Q9UN42 357 aaPredicted RBP20.21■□□□□ 0.83
LINC01398-202ENST00000634819 TROQ12816 1431 aaPredicted RBP20.2■□□□□ 0.82
LINC01398-202ENST00000634819 ABCC1P33527 1531 aa20.19■□□□□ 0.82
LINC01398-202ENST00000634819 LOC105371045A0A1W2PR82 267 aa20.19■□□□□ 0.82
LINC01398-202ENST00000634819 CPS1P31327 1500 aa20.18■□□□□ 0.82
LINC01398-202ENST00000634819 KIDINS220Q9ULH0 1771 aa20.18■□□□□ 0.82
LINC01398-202ENST00000634819 PTPRKQ15262 1439 aa20.18■□□□□ 0.82
LINC01398-202ENST00000634819 CLIP1P30622 1438 aa20.15■□□□□ 0.82
LINC01398-202ENST00000634819 CDC42BPBQ9Y5S2 1711 aa20.15■□□□□ 0.82
LINC01398-202ENST00000634819 ITSN2Q9NZM3 1697 aa20.14■□□□□ 0.81
LINC01398-202ENST00000634819 SHANK2Q9UPX8 1470 aa20.14■□□□□ 0.81
LINC01398-202ENST00000634819 ALKQ9UM73 1620 aa20.13■□□□□ 0.81
LINC01398-202ENST00000634819 SUPT6HQ7KZ85 1726 aaKnown RBP20.13■□□□□ 0.81
LINC01398-202ENST00000634819 FMN1Q68DA7 1419 aa20.12■□□□□ 0.81
LINC01398-202ENST00000634819 CLTCQ00610 1675 aaKnown RBP20.12■□□□□ 0.81
LINC01398-202ENST00000634819 RGS17Q9UGC6 210 aaPredicted RBP20.11■□□□□ 0.81
LINC01398-202ENST00000634819 PREX2Q70Z35 1606 aa20.09■□□□□ 0.81
LINC01398-202ENST00000634819 A2ML1A8K2U0 1454 aa20.09■□□□□ 0.81
LINC01398-202ENST00000634819 SAMD9LQ8IVG5 1584 aa20.08■□□□□ 0.81
LINC01398-202ENST00000634819 DNMT1P26358 1616 aaKnown RBP20.08■□□□□ 0.8
LINC01398-202ENST00000634819 NEURL4Q96JN8 1562 aa20.08■□□□□ 0.8
LINC01398-202ENST00000634819 ARHGAP35Q9NRY4 1499 aa20.06■□□□□ 0.8
LINC01398-202ENST00000634819 SENP3Q9H4L4 574 aaPredicted RBP20.06■□□□□ 0.8
LINC01398-202ENST00000634819 VWDEQ8N2E2 1590 aa20.04■□□□□ 0.8
LINC01398-202ENST00000634819 PLXNC1O60486 1568 aa20.04■□□□□ 0.8
LINC01398-202ENST00000634819 SPAG9O60271 1321 aaKnown RBP20.03■□□□□ 0.8
LINC01398-202ENST00000634819 CEP162Q5TB80 1403 aa20.03■□□□□ 0.8
LINC01398-202ENST00000634819 GGT6Q6P531 493 aa20.03■□□□□ 0.8
LINC01398-202ENST00000634819 A2MP01023 1474 aa20.01■□□□□ 0.79
LINC01398-202ENST00000634819 POLR1AO95602 1720 aaPredicted RBP20.01■□□□□ 0.79
LINC01398-202ENST00000634819 LRRIQ1Q96JM4 1722 aa19.99■□□□□ 0.79
LINC01398-202ENST00000634819 ATP7AQ04656 1500 aa19.98■□□□□ 0.79
LINC01398-202ENST00000634819 SYCP2Q9BX26 1530 aa19.98■□□□□ 0.79
LINC01398-202ENST00000634819 ZNF777Q9ULD5 760 aaPredicted RBP19.98■□□□□ 0.79
LINC01398-202ENST00000634819 HNRNPMP52272 730 aaKnown RBP eCLIP19.96■□□□□ 0.79
LINC01398-202ENST00000634819 ANKLE2Q86XL3 938 aa19.96■□□□□ 0.79
LINC01398-202ENST00000634819 POTEAQ6S8J7 498 aa19.95■□□□□ 0.78
LINC01398-202ENST00000634819 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.95■□□□□ 0.78
LINC01398-202ENST00000634819 CDC42BPAQ5VT25 1732 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms