RNA–Protein interactions for RNA: ENST00000634620.1

ATP7B-213, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 5,653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-213ENST00000634620 KIF3BO15066 747 aa14.27□□□□□ -0.12
ATP7B-213ENST00000634620 CARD11Q9BXL7 1154 aa14.27□□□□□ -0.12
ATP7B-213ENST00000634620 RTN4Q9NQC3 1192 aaKnown RBP14.27□□□□□ -0.13
ATP7B-213ENST00000634620 FHOD3Q2V2M9 1422 aa14.26□□□□□ -0.13
ATP7B-213ENST00000634620 UBAP1LF5GYI3 381 aa14.26□□□□□ -0.13
ATP7B-213ENST00000634620 EVA1CP58658 441 aa14.25□□□□□ -0.13
ATP7B-213ENST00000634620 ERICH6BQ5W0A0 696 aa14.25□□□□□ -0.13
ATP7B-213ENST00000634620 BECN1Q14457 450 aa14.24□□□□□ -0.13
ATP7B-213ENST00000634620 RGL3Q3MIN7 710 aa14.24□□□□□ -0.13
ATP7B-213ENST00000634620 CCER2I3L3R5 266 aa14.24□□□□□ -0.13
ATP7B-213ENST00000634620 PPP1R1BQ9UD71 204 aaPredicted RBP14.24□□□□□ -0.13
ATP7B-213ENST00000634620 TOM1O60784 492 aa14.23□□□□□ -0.13
ATP7B-213ENST00000634620 AQRO60306 1485 aaKnown RBP eCLIP14.22□□□□□ -0.132e-6■■■■■ 28
ATP7B-213ENST00000634620 NAP1L5Q96NT1 182 aaPredicted RBP14.21□□□□□ -0.13
ATP7B-213ENST00000634620 KIF21BO75037 1637 aa14.21□□□□□ -0.14
ATP7B-213ENST00000634620 NUTM2BA6NNL0 878 aaPredicted RBP14.21□□□□□ -0.14
ATP7B-213ENST00000634620 NUTM2EB1AL46 878 aaPredicted RBP14.21□□□□□ -0.14
ATP7B-213ENST00000634620 NUTM2DQ5VT03 806 aaPredicted RBP14.21□□□□□ -0.14
ATP7B-213ENST00000634620 NUTM2AQ8IVF1 878 aaPredicted RBP14.21□□□□□ -0.14
ATP7B-213ENST00000634620 DHX57Q6P158 1386 aaKnown RBP14.2□□□□□ -0.14
ATP7B-213ENST00000634620 CDCA8Q53HL2 280 aa14.2□□□□□ -0.14
ATP7B-213ENST00000634620 PPM1GO15355 546 aaPredicted RBP14.2□□□□□ -0.14
ATP7B-213ENST00000634620 SUPT16HQ9Y5B9 1047 aaKnown RBP14.19□□□□□ -0.14
ATP7B-213ENST00000634620 NESP48681 1621 aa14.19□□□□□ -0.14
ATP7B-213ENST00000634620 PROSER2Q86WR7 435 aaPredicted RBP14.18□□□□□ -0.14
ATP7B-213ENST00000634620 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
ATP7B-213ENST00000634620 GAPVD1Q14C86 1478 aa14.18□□□□□ -0.14
ATP7B-213ENST00000634620 HSPA5P11021 654 aaKnown RBP14.17□□□□□ -0.14
ATP7B-213ENST00000634620 GOLGA6L22H0YM25 854 aa14.16□□□□□ -0.14
ATP7B-213ENST00000634620 FGD5Q6ZNL6 1462 aa14.16□□□□□ -0.14
ATP7B-213ENST00000634620 THEMISQ8N1K5 641 aaPredicted RBP14.16□□□□□ -0.14
ATP7B-213ENST00000634620 PRG4Q92954 1404 aaPredicted RBP14.15□□□□□ -0.14
ATP7B-213ENST00000634620 MPHOSPH9Q99550 1183 aa14.15□□□□□ -0.14
ATP7B-213ENST00000634620 KNSTRNQ9Y448 316 aa14.15□□□□□ -0.14
ATP7B-213ENST00000634620 IGF1RP08069 1367 aa14.15□□□□□ -0.14
ATP7B-213ENST00000634620 SYNJ1O43426 1573 aa14.14□□□□□ -0.15
ATP7B-213ENST00000634620 NCLP19338 710 aaKnown RBP14.14□□□□□ -0.15
ATP7B-213ENST00000634620 ANKLE2Q86XL3 938 aa14.14□□□□□ -0.15
ATP7B-213ENST00000634620 PTMAP06454 111 aaKnown RBP14.14□□□□□ -0.15
ATP7B-213ENST00000634620 NOP58Q9Y2X3 529 aaKnown RBP14.14□□□□□ -0.15
ATP7B-213ENST00000634620 LAS1LQ9Y4W2 734 aaKnown RBP14.14□□□□□ -0.15
ATP7B-213ENST00000634620 ERICH3Q5RHP9 1530 aa14.13□□□□□ -0.15
ATP7B-213ENST00000634620 RSPH4AQ5TD94 716 aa14.13□□□□□ -0.15
ATP7B-213ENST00000634620 CCDC18Q5T9S5 1454 aa14.13□□□□□ -0.15
ATP7B-213ENST00000634620 DNTTIP2Q5QJE6 756 aaKnown RBP14.12□□□□□ -0.15
ATP7B-213ENST00000634620 DCAF11Q8TEB1 546 aa14.12□□□□□ -0.15
ATP7B-213ENST00000634620 NGDNQ8NEJ9 315 aaKnown RBP14.11□□□□□ -0.15
ATP7B-213ENST00000634620 PPP4R2Q9NY27 417 aa14.11□□□□□ -0.15
ATP7B-213ENST00000634620 PKD2Q13563 968 aa14.11□□□□□ -0.15
ATP7B-213ENST00000634620 STK26Q9P289 416 aa14.1□□□□□ -0.15
ATP7B-213ENST00000634620 ANKRD30AQ9BXX3 1397 aa14.1□□□□□ -0.15
ATP7B-213ENST00000634620 MYH16Q9H6N6 1097 aa14.09□□□□□ -0.15
ATP7B-213ENST00000634620 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.09□□□□□ -0.15
ATP7B-213ENST00000634620 SOX12O15370 315 aa14.09□□□□□ -0.15
ATP7B-213ENST00000634620 CDK11BP21127 795 aaKnown RBP14.08□□□□□ -0.16
ATP7B-213ENST00000634620 DEKP35659 375 aaKnown RBP14.07□□□□□ -0.16
ATP7B-213ENST00000634620 TMF1P82094 1093 aa14.06□□□□□ -0.16
ATP7B-213ENST00000634620 TOP2BQ02880 1626 aa14.06□□□□□ -0.16
ATP7B-213ENST00000634620 SRPK2P78362 688 aaKnown RBP14.06□□□□□ -0.16
ATP7B-213ENST00000634620 CFTRP13569 1480 aa14.05□□□□□ -0.16
ATP7B-213ENST00000634620 CFAP53Q96M91 514 aa14.05□□□□□ -0.16
ATP7B-213ENST00000634620 RAD54L2Q9Y4B4 1467 aa14.05□□□□□ -0.16
ATP7B-213ENST00000634620 HMGB2P26583 209 aaKnown RBP14.05□□□□□ -0.16
ATP7B-213ENST00000634620 SENP3-EIF4A1A0A087X0R7 540 aa14.04□□□□□ -0.16
ATP7B-213ENST00000634620 NUP155O75694 1391 aa14.04□□□□□ -0.16
ATP7B-213ENST00000634620 LAMC3Q9Y6N6 1575 aa14.04□□□□□ -0.16
ATP7B-213ENST00000634620 HMGXB3Q12766 1538 aa14.04□□□□□ -0.16
ATP7B-213ENST00000634620 G3V3G9 751 aa14.03□□□□□ -0.16
ATP7B-213ENST00000634620 DCAF8Q5TAQ9 597 aa14.03□□□□□ -0.16
ATP7B-213ENST00000634620 CC2D1BQ5T0F9 858 aaKnown RBP14.03□□□□□ -0.16
ATP7B-213ENST00000634620 SAFB2Q14151 953 aaKnown RBP eCLIP14.02□□□□□ -0.16
ATP7B-213ENST00000634620 L3MBTL2Q969R5 705 aa14.01□□□□□ -0.17
ATP7B-213ENST00000634620 LRRC9Q6ZRR7 1453 aa14.01□□□□□ -0.17
ATP7B-213ENST00000634620 HNRNPMP52272 730 aaKnown RBP eCLIP14.01□□□□□ -0.171e-6■■■■□ 20.3
ATP7B-213ENST00000634620 PPP6R1Q9UPN7 881 aa14.01□□□□□ -0.17
ATP7B-213ENST00000634620 CUX1P39880 1505 aa14.01□□□□□ -0.17
ATP7B-213ENST00000634620 TXNDC2Q86VQ3 553 aa13.99□□□□□ -0.17
ATP7B-213ENST00000634620 SNAPC4Q5SXM2 1469 aa13.99□□□□□ -0.17
ATP7B-213ENST00000634620 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
ATP7B-213ENST00000634620 PRXQ9BXM0 1461 aa13.99□□□□□ -0.17
ATP7B-213ENST00000634620 ROCK2O75116 1388 aaKnown RBP13.99□□□□□ -0.17
ATP7B-213ENST00000634620 PSME1Q06323 249 aa13.98□□□□□ -0.17
ATP7B-213ENST00000634620 FGD6Q6ZV73 1430 aa13.97□□□□□ -0.17
ATP7B-213ENST00000634620 CASKIN1Q8WXD9 1431 aa13.97□□□□□ -0.17
ATP7B-213ENST00000634620 KTN1Q86UP2 1357 aaKnown RBP13.97□□□□□ -0.17
ATP7B-213ENST00000634620 DISP3Q9P2K9 1392 aa13.97□□□□□ -0.17
ATP7B-213ENST00000634620 RRBP1Q9P2E9 1410 aaKnown RBP13.96□□□□□ -0.17
ATP7B-213ENST00000634620 PHLDB1Q86UU1 1377 aa13.96□□□□□ -0.17
ATP7B-213ENST00000634620 TEX14Q8IWB6 1497 aa13.96□□□□□ -0.17
ATP7B-213ENST00000634620 ZRSR1Q15695 479 aaKnown RBP13.95□□□□□ -0.18
ATP7B-213ENST00000634620 RALBP1Q15311 655 aa13.95□□□□□ -0.18
ATP7B-213ENST00000634620 MYOM3Q5VTT5 1437 aa13.95□□□□□ -0.18
ATP7B-213ENST00000634620 NUTM2FA1L443 756 aa13.95□□□□□ -0.18
ATP7B-213ENST00000634620 TPRNQ4KMQ1 711 aa13.95□□□□□ -0.18
ATP7B-213ENST00000634620 NGLY1Q96IV0 654 aa13.95□□□□□ -0.18
ATP7B-213ENST00000634620 B4GALNT3Q6L9W6 998 aa13.94□□□□□ -0.18
ATP7B-213ENST00000634620 FYCO1Q9BQS8 1478 aa13.94□□□□□ -0.18
ATP7B-213ENST00000634620 WASHC2AQ641Q2 1341 aa13.94□□□□□ -0.18
ATP7B-213ENST00000634620 GTF2E1P29083 439 aaPredicted RBP13.93□□□□□ -0.18
ATP7B-213ENST00000634620 RBM19Q9Y4C8 960 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms