RNA–Protein interactions for RNA: ENST00000633522.1

LINC01002-229, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5

Gene LINC01002, Length 570 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-229ENST00000633522 CEBPAP49715 358 aaPredicted RBP19.53■□□□□ 0.72
LINC01002-229ENST00000633522 RAPGEF6Q8TEU7 1601 aa19.52■□□□□ 0.72
LINC01002-229ENST00000633522 MLECQ14165 292 aa19.52■□□□□ 0.72
LINC01002-229ENST00000633522 C3P01024 1663 aa19.49■□□□□ 0.71
LINC01002-229ENST00000633522 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.48■□□□□ 0.71
LINC01002-229ENST00000633522 NUP153P49790 1475 aaKnown RBP19.47■□□□□ 0.71
LINC01002-229ENST00000633522 SAMD9Q5K651 1589 aa19.46■□□□□ 0.71
LINC01002-229ENST00000633522 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
LINC01002-229ENST00000633522 ATP10AO60312 1499 aa19.45■□□□□ 0.7
LINC01002-229ENST00000633522 C9orf84Q5VXU9 1444 aa19.43■□□□□ 0.7
LINC01002-229ENST00000633522 PRXQ9BXM0 1461 aa19.39■□□□□ 0.69
LINC01002-229ENST00000633522 UBAP1LF5GYI3 381 aa19.36■□□□□ 0.69
LINC01002-229ENST00000633522 REREQ9P2R6 1566 aa19.35■□□□□ 0.69
LINC01002-229ENST00000633522 SCAPERQ9BY12 1400 aa19.34■□□□□ 0.69
LINC01002-229ENST00000633522 P3H3Q8IVL6 736 aa19.34■□□□□ 0.69
LINC01002-229ENST00000633522 CAMSAP1Q5T5Y3 1602 aa19.33■□□□□ 0.69
LINC01002-229ENST00000633522 ZNF335Q9H4Z2 1342 aaPredicted RBP19.33■□□□□ 0.69
LINC01002-229ENST00000633522 TRAPPC8Q9Y2L5 1435 aa19.32■□□□□ 0.68
LINC01002-229ENST00000633522 KDM5CP41229 1560 aa19.32■□□□□ 0.68
LINC01002-229ENST00000633522 DIP2CQ9Y2E4 1556 aa19.32■□□□□ 0.68
LINC01002-229ENST00000633522 HSPA1LP34931 641 aa19.3■□□□□ 0.68
LINC01002-229ENST00000633522 PLCH2O75038 1416 aa19.28■□□□□ 0.68
LINC01002-229ENST00000633522 AGLP35573 1532 aa19.26■□□□□ 0.67
LINC01002-229ENST00000633522 ABCA6Q8N139 1617 aa19.26■□□□□ 0.67
LINC01002-229ENST00000633522 ZNF142P52746 1687 aaPredicted RBP19.25■□□□□ 0.67
LINC01002-229ENST00000633522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.25■□□□□ 0.67
LINC01002-229ENST00000633522 HNRNPUL2Q1KMD3 747 aaKnown RBP19.25■□□□□ 0.67
LINC01002-229ENST00000633522 ALKQ9UM73 1620 aa19.25■□□□□ 0.67
LINC01002-229ENST00000633522 TCOF1Q13428 1488 aaKnown RBP19.23■□□□□ 0.67
LINC01002-229ENST00000633522 PLEKHD1A6NEE1 506 aa19.23■□□□□ 0.67
LINC01002-229ENST00000633522 MYO5CQ9NQX4 1742 aa19.22■□□□□ 0.67
LINC01002-229ENST00000633522 MROH2AA6NES4 1674 aa19.22■□□□□ 0.67
LINC01002-229ENST00000633522 FAM9AQ8IZU1 332 aaPredicted RBP19.21■□□□□ 0.67
LINC01002-229ENST00000633522 PLA2R1Q13018 1463 aa19.21■□□□□ 0.67
LINC01002-229ENST00000633522 ZNF518AQ6AHZ1 1483 aa19.21■□□□□ 0.67
LINC01002-229ENST00000633522 NCKAP5LQ9HCH0 1330 aa19.2■□□□□ 0.66
LINC01002-229ENST00000633522 NPATQ14207 1427 aa19.19■□□□□ 0.66
LINC01002-229ENST00000633522 SUPT6HQ7KZ85 1726 aaKnown RBP19.18■□□□□ 0.66
LINC01002-229ENST00000633522 MYO3AQ8NEV4 1616 aa19.17■□□□□ 0.66
LINC01002-229ENST00000633522 MLH3Q9UHC1 1453 aa19.15■□□□□ 0.66
LINC01002-229ENST00000633522 CDK13Q14004 1512 aaKnown RBP19.15■□□□□ 0.66
LINC01002-229ENST00000633522 CNTLNQ9NXG0 1405 aa19.14■□□□□ 0.65
LINC01002-229ENST00000633522 CEP170BQ9Y4F5 1589 aaPredicted RBP19.12■□□□□ 0.65
LINC01002-229ENST00000633522 AFAP1Q8N556 730 aa19.12■□□□□ 0.65
LINC01002-229ENST00000633522 RGS17Q9UGC6 210 aaPredicted RBP19.12■□□□□ 0.65
LINC01002-229ENST00000633522 KIDINS220Q9ULH0 1771 aa19.11■□□□□ 0.65
LINC01002-229ENST00000633522 PKD2Q13563 968 aa19.1■□□□□ 0.65
LINC01002-229ENST00000633522 KIF14Q15058 1648 aa19.1■□□□□ 0.65
LINC01002-229ENST00000633522 PIP4K2BP78356 416 aa19.09■□□□□ 0.65
LINC01002-229ENST00000633522 PHF23Q9BUL5 403 aaPredicted RBP19.09■□□□□ 0.65
LINC01002-229ENST00000633522 CPS1P31327 1500 aa19.09■□□□□ 0.65
LINC01002-229ENST00000633522 EFCAB2Q5VUJ9 269 aa19.08■□□□□ 0.64
LINC01002-229ENST00000633522 CDC42BPBQ9Y5S2 1711 aa19.08■□□□□ 0.64
LINC01002-229ENST00000633522 NEURL4Q96JN8 1562 aa19.07■□□□□ 0.64
LINC01002-229ENST00000633522 POLR1AO95602 1720 aaPredicted RBP19.06■□□□□ 0.64
LINC01002-229ENST00000633522 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
LINC01002-229ENST00000633522 TOM1O60784 492 aa19.04■□□□□ 0.64
LINC01002-229ENST00000633522 SRCAPQ6ZRS2 3230 aa19.04■□□□□ 0.64
LINC01002-229ENST00000633522 ZMYM3Q14202 1370 aa19.04■□□□□ 0.64
LINC01002-229ENST00000633522 CLTCQ00610 1675 aaKnown RBP19.03■□□□□ 0.64
LINC01002-229ENST00000633522 ITSN2Q9NZM3 1697 aa19.03■□□□□ 0.64
LINC01002-229ENST00000633522 SHANK2Q9UPX8 1470 aa19.03■□□□□ 0.64
LINC01002-229ENST00000633522 VWDEQ8N2E2 1590 aa19.02■□□□□ 0.64
LINC01002-229ENST00000633522 PTPRKQ15262 1439 aa19.02■□□□□ 0.64
LINC01002-229ENST00000633522 PPP6R1Q9UPN7 881 aa19.02■□□□□ 0.64
LINC01002-229ENST00000633522 DNMT1P26358 1616 aaKnown RBP19.01■□□□□ 0.63
LINC01002-229ENST00000633522 ABCC1P33527 1531 aa19■□□□□ 0.63
LINC01002-229ENST00000633522 ARHGAP5Q13017 1502 aa19■□□□□ 0.63
LINC01002-229ENST00000633522 ESF1Q9H501 851 aaKnown RBP18.98■□□□□ 0.63
LINC01002-229ENST00000633522 STRCP1A6NGW2 1772 aa18.98■□□□□ 0.63
LINC01002-229ENST00000633522 SETD1AO15047 1707 aaKnown RBP18.96■□□□□ 0.63
LINC01002-229ENST00000633522 PREX2Q70Z35 1606 aa18.95■□□□□ 0.62
LINC01002-229ENST00000633522 A2ML1A8K2U0 1454 aa18.94■□□□□ 0.62
LINC01002-229ENST00000633522 LRRIQ1Q96JM4 1722 aa18.94■□□□□ 0.62
LINC01002-229ENST00000633522 PLXNC1O60486 1568 aa18.93■□□□□ 0.62
LINC01002-229ENST00000633522 POTEAQ6S8J7 498 aa18.91■□□□□ 0.62
LINC01002-229ENST00000633522 SAMD9LQ8IVG5 1584 aa18.9■□□□□ 0.62
LINC01002-229ENST00000633522 RNF17Q9BXT8 1623 aaKnown RBP18.9■□□□□ 0.62
LINC01002-229ENST00000633522 TROQ12816 1431 aaPredicted RBP18.89■□□□□ 0.61
LINC01002-229ENST00000633522 MYT1LQ9UL68 1186 aa18.87■□□□□ 0.61
LINC01002-229ENST00000633522 CDC42BPAQ5VT25 1732 aa18.86■□□□□ 0.61
LINC01002-229ENST00000633522 LRRC7Q96NW7 1537 aa18.85■□□□□ 0.61
LINC01002-229ENST00000633522 DEPDC5O75140 1603 aa18.85■□□□□ 0.61
LINC01002-229ENST00000633522 MED14O60244 1454 aa18.84■□□□□ 0.61
LINC01002-229ENST00000633522 SYNMO15061 1565 aa18.84■□□□□ 0.61
LINC01002-229ENST00000633522 XIRP1Q702N8 1843 aaKnown RBP18.84■□□□□ 0.61
LINC01002-229ENST00000633522 RANGAP1P46060 587 aaPredicted RBP18.83■□□□□ 0.6
LINC01002-229ENST00000633522 INO80Q9ULG1 1556 aaPredicted RBP18.82■□□□□ 0.6
LINC01002-229ENST00000633522 CSRNP3Q8WYN3 585 aa18.8■□□□□ 0.6
LINC01002-229ENST00000633522 IQGAP1P46940 1657 aa18.79■□□□□ 0.6
LINC01002-229ENST00000633522 SENP3Q9H4L4 574 aaPredicted RBP18.77■□□□□ 0.6
LINC01002-229ENST00000633522 ATP7AQ04656 1500 aa18.77■□□□□ 0.6
LINC01002-229ENST00000633522 ZC3H13Q5T200 1668 aaKnown RBP18.76■□□□□ 0.59
LINC01002-229ENST00000633522 A2MP01023 1474 aa18.75■□□□□ 0.59
LINC01002-229ENST00000633522 NPHP4O75161 1426 aaPredicted RBP18.74■□□□□ 0.59
LINC01002-229ENST00000633522 SYCP2Q9BX26 1530 aa18.74■□□□□ 0.59
LINC01002-229ENST00000633522 CDK11AQ9UQ88 783 aaPredicted RBP18.74■□□□□ 0.59
LINC01002-229ENST00000633522 CLIP1P30622 1438 aa18.74■□□□□ 0.59
LINC01002-229ENST00000633522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.72■□□□□ 0.59
LINC01002-229ENST00000633522 FMN1Q68DA7 1419 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms