RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 KDM6BO15054 1643 aa17.54■□□□□ 0.4
PHACTR4-206ENST00000632421 ABCC5O15440 1437 aa17.54■□□□□ 0.4
PHACTR4-206ENST00000632421 ZNF644Q9H582 1327 aaPredicted RBP17.53■□□□□ 0.4
PHACTR4-206ENST00000632421 KIF14Q15058 1648 aa17.52■□□□□ 0.4
PHACTR4-206ENST00000632421 TRIM52Q96A61 297 aa17.52■□□□□ 0.4
PHACTR4-206ENST00000632421 GPATCH8Q9UKJ3 1502 aaKnown RBP17.5■□□□□ 0.39
PHACTR4-206ENST00000632421 CAMSAP2Q08AD1 1489 aa17.5■□□□□ 0.39
PHACTR4-206ENST00000632421 CFDP1Q9UEE9 299 aaPredicted RBP17.5■□□□□ 0.39
PHACTR4-206ENST00000632421 CHD1O14646 1710 aa17.5■□□□□ 0.39
PHACTR4-206ENST00000632421 DENND4BO75064 1496 aaPredicted RBP17.48■□□□□ 0.39
PHACTR4-206ENST00000632421 ATP10BO94823 1461 aa17.48■□□□□ 0.39
PHACTR4-206ENST00000632421 PLEKHD1A6NEE1 506 aa17.47■□□□□ 0.39
PHACTR4-206ENST00000632421 MPHOSPH9Q99550 1183 aa17.46■□□□□ 0.39
PHACTR4-206ENST00000632421 PTPRGP23470 1445 aa17.45■□□□□ 0.38
PHACTR4-206ENST00000632421 MYT1Q01538 1121 aa17.44■□□□□ 0.38
PHACTR4-206ENST00000632421 ADGBQ8N7X0 1667 aa17.43■□□□□ 0.38
PHACTR4-206ENST00000632421 KDM5BQ9UGL1 1544 aa17.43■□□□□ 0.38
PHACTR4-206ENST00000632421 CDC42BPAQ5VT25 1732 aa17.42■□□□□ 0.38
PHACTR4-206ENST00000632421 CROCC2H7BZ55 1655 aa17.42■□□□□ 0.38
PHACTR4-206ENST00000632421 ZNF777Q9ULD5 760 aaPredicted RBP17.42■□□□□ 0.38
PHACTR4-206ENST00000632421 ABCC10Q5T3U5 1492 aa17.42■□□□□ 0.38
PHACTR4-206ENST00000632421 SHROOM2Q13796 1616 aa17.41■□□□□ 0.38
PHACTR4-206ENST00000632421 ADGRL2O95490 1459 aa17.4■□□□□ 0.38
PHACTR4-206ENST00000632421 NCOA1Q15788 1441 aa17.39■□□□□ 0.38
PHACTR4-206ENST00000632421 DDX10Q13206 875 aaKnown RBP17.37■□□□□ 0.37
PHACTR4-206ENST00000632421 HIRIP3Q9BW71 556 aaPredicted RBP17.36■□□□□ 0.37
PHACTR4-206ENST00000632421 ANKRD30AQ9BXX3 1397 aa17.36■□□□□ 0.37
PHACTR4-206ENST00000632421 FOXD1Q16676 465 aa17.35■□□□□ 0.37
PHACTR4-206ENST00000632421 ANKRD30BQ9BXX2 1392 aa17.35■□□□□ 0.37
PHACTR4-206ENST00000632421 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
PHACTR4-206ENST00000632421 SHANK2Q9UPX8 1470 aa17.34■□□□□ 0.37
PHACTR4-206ENST00000632421 PZPP20742 1482 aa17.32■□□□□ 0.36
PHACTR4-206ENST00000632421 RPRD2Q5VT52 1461 aaKnown RBP17.32■□□□□ 0.36
PHACTR4-206ENST00000632421 C9orf84Q5VXU9 1444 aa17.3■□□□□ 0.36
PHACTR4-206ENST00000632421 ERCC6L2Q5T890 1561 aa17.3■□□□□ 0.36
PHACTR4-206ENST00000632421 L3MBTL2Q969R5 705 aa17.29■□□□□ 0.36
PHACTR4-206ENST00000632421 ANKRD50Q9ULJ7 1429 aa17.29■□□□□ 0.36
PHACTR4-206ENST00000632421 PREX2Q70Z35 1606 aa17.29■□□□□ 0.36
PHACTR4-206ENST00000632421 ARHGEF5Q12774 1597 aa17.29■□□□□ 0.36
PHACTR4-206ENST00000632421 ABCC2Q92887 1545 aa17.28■□□□□ 0.36
PHACTR4-206ENST00000632421 TSPY4P0CV99 314 aa17.27■□□□□ 0.35
PHACTR4-206ENST00000632421 TSPY10P0CW01 314 aa17.27■□□□□ 0.35
PHACTR4-206ENST00000632421 CDC42BPBQ9Y5S2 1711 aa17.27■□□□□ 0.35
PHACTR4-206ENST00000632421 CLASP1Q7Z460 1538 aa17.26■□□□□ 0.35
PHACTR4-206ENST00000632421 TEX14Q8IWB6 1497 aa17.26■□□□□ 0.35
PHACTR4-206ENST00000632421 SAMD9LQ8IVG5 1584 aa17.25■□□□□ 0.35
PHACTR4-206ENST00000632421 KIAA1107Q9UPP5 1409 aa17.25■□□□□ 0.35
PHACTR4-206ENST00000632421 MBD5Q9P267 1494 aa17.25■□□□□ 0.35
PHACTR4-206ENST00000632421 HNRNPMP52272 730 aaKnown RBP eCLIP17.24■□□□□ 0.352e-7■■■■□ 22
PHACTR4-206ENST00000632421 CCDC141Q6ZP82 1450 aa17.23■□□□□ 0.35
PHACTR4-206ENST00000632421 TTC37Q6PGP7 1564 aa17.22■□□□□ 0.35
PHACTR4-206ENST00000632421 HSPA5P11021 654 aaKnown RBP17.22■□□□□ 0.35
PHACTR4-206ENST00000632421 EIF4G2P78344 907 aaKnown RBP eCLIP17.22■□□□□ 0.35
PHACTR4-206ENST00000632421 ANP32CO43423 234 aa17.21■□□□□ 0.35
PHACTR4-206ENST00000632421 KCNH8Q96L42 1107 aa17.21■□□□□ 0.35
PHACTR4-206ENST00000632421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.21■□□□□ 0.35
PHACTR4-206ENST00000632421 KIF15Q9NS87 1388 aa17.21■□□□□ 0.35
PHACTR4-206ENST00000632421 RSPH4AQ5TD94 716 aa17.2■□□□□ 0.34
PHACTR4-206ENST00000632421 PKD2Q13563 968 aa17.2■□□□□ 0.34
PHACTR4-206ENST00000632421 ARHGAP5Q13017 1502 aa17.19■□□□□ 0.34
PHACTR4-206ENST00000632421 KDM5DQ9BY66 1539 aa17.19■□□□□ 0.34
PHACTR4-206ENST00000632421 NUP155O75694 1391 aa17.19■□□□□ 0.34
PHACTR4-206ENST00000632421 MYO5CQ9NQX4 1742 aa17.18■□□□□ 0.34
PHACTR4-206ENST00000632421 CCER2I3L3R5 266 aa17.17■□□□□ 0.34
PHACTR4-206ENST00000632421 UHRF1BP1LA0JNW5 1464 aa17.17■□□□□ 0.34
PHACTR4-206ENST00000632421 NBPF8Q3BBV2 869 aa17.17■□□□□ 0.34
PHACTR4-206ENST00000632421 SYCP2Q9BX26 1530 aa17.17■□□□□ 0.34
PHACTR4-206ENST00000632421 ZCCHC11Q5TAX3 1644 aaKnown RBP17.17■□□□□ 0.34
PHACTR4-206ENST00000632421 WASHC2AQ641Q2 1341 aa17.15■□□□□ 0.34
PHACTR4-206ENST00000632421 MAST1Q9Y2H9 1570 aa17.14■□□□□ 0.34
PHACTR4-206ENST00000632421 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.34
PHACTR4-206ENST00000632421 PLCH2O75038 1416 aa17.09■□□□□ 0.33
PHACTR4-206ENST00000632421 PLXNC1O60486 1568 aa17.08■□□□□ 0.33
PHACTR4-206ENST00000632421 SPATA31E1Q6ZUB1 1445 aa17.08■□□□□ 0.32
PHACTR4-206ENST00000632421 FAM135AQ9P2D6 1515 aa17.07■□□□□ 0.32
PHACTR4-206ENST00000632421 CCDC7Q96M83 1385 aa17.07■□□□□ 0.32
PHACTR4-206ENST00000632421 CNTLNQ9NXG0 1405 aa17.06■□□□□ 0.32
PHACTR4-206ENST00000632421 UNC13BO14795 1591 aa17.06■□□□□ 0.32
PHACTR4-206ENST00000632421 EFCAB2Q5VUJ9 269 aa17.05■□□□□ 0.32
PHACTR4-206ENST00000632421 ARHGEF12Q9NZN5 1544 aa17.05■□□□□ 0.32
PHACTR4-206ENST00000632421 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
PHACTR4-206ENST00000632421 C11orf95C9JLR9 678 aaPredicted RBP17.04■□□□□ 0.32
PHACTR4-206ENST00000632421 UHRF1BP1Q6BDS2 1440 aa17.04■□□□□ 0.32
PHACTR4-206ENST00000632421 ZNF326Q5BKZ1 582 aaKnown RBP17.03■□□□□ 0.32
PHACTR4-206ENST00000632421 ABCC1P33527 1531 aa17.03■□□□□ 0.32
PHACTR4-206ENST00000632421 DUOX2Q9NRD8 1548 aa17.02■□□□□ 0.32
PHACTR4-206ENST00000632421 ARAP3Q8WWN8 1544 aa17■□□□□ 0.31
PHACTR4-206ENST00000632421 RALGAPBQ86X10 1494 aa17■□□□□ 0.31
PHACTR4-206ENST00000632421 USP47Q96K76 1375 aa17■□□□□ 0.31
PHACTR4-206ENST00000632421 KIF7Q2M1P5 1343 aa16.99■□□□□ 0.31
PHACTR4-206ENST00000632421 ERBINQ96RT1 1412 aa16.99■□□□□ 0.31
PHACTR4-206ENST00000632421 IQGAP3Q86VI3 1631 aa16.99■□□□□ 0.31
PHACTR4-206ENST00000632421 WDR7Q9Y4E6 1490 aa16.98■□□□□ 0.31
PHACTR4-206ENST00000632421 KDM5CP41229 1560 aa16.98■□□□□ 0.31
PHACTR4-206ENST00000632421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.97■□□□□ 0.311e-6■■■□□ 18.7
PHACTR4-206ENST00000632421 TRAPPC8Q9Y2L5 1435 aa16.97■□□□□ 0.31
PHACTR4-206ENST00000632421 CCDC144AA2RUR9 1427 aa16.96■□□□□ 0.31
PHACTR4-206ENST00000632421 MAGI2Q86UL8 1455 aa16.96■□□□□ 0.31
PHACTR4-206ENST00000632421 DCAF11Q8TEB1 546 aa16.94■□□□□ 0.3
PHACTR4-206ENST00000632421 KDM2AQ9Y2K7 1162 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms