RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 DMRT2Q9Y5R5 561 aa11.47□□□□□ -0.57
GPC3-204ENST00000631057 MAGI1Q96QZ7 1491 aaPredicted RBP11.46□□□□□ -0.57
GPC3-204ENST00000631057 FKBP8Q14318 412 aa11.45□□□□□ -0.58
GPC3-204ENST00000631057 DNMT1P26358 1616 aaKnown RBP11.45□□□□□ -0.58
GPC3-204ENST00000631057 DDX10Q13206 875 aaKnown RBP11.44□□□□□ -0.58
GPC3-204ENST00000631057 NUP153P49790 1475 aaKnown RBP11.43□□□□□ -0.58
GPC3-204ENST00000631057 KDM5BQ9UGL1 1544 aa11.43□□□□□ -0.58
GPC3-204ENST00000631057 ITSN2Q9NZM3 1697 aa11.43□□□□□ -0.58
GPC3-204ENST00000631057 KDM6BO15054 1643 aa11.43□□□□□ -0.58
GPC3-204ENST00000631057 ROCK1Q13464 1354 aa11.42□□□□□ -0.58
GPC3-204ENST00000631057 RRP7BPQ9NSQ0 103 aa11.42□□□□□ -0.58
GPC3-204ENST00000631057 DAPK1P53355 1430 aa11.41□□□□□ -0.58
GPC3-204ENST00000631057 ADCY10Q96PN6 1610 aa11.41□□□□□ -0.58
GPC3-204ENST00000631057 CHMP7Q8WUX9 453 aaPredicted RBP11.41□□□□□ -0.58
GPC3-204ENST00000631057 CDK11AQ9UQ88 783 aaPredicted RBP11.41□□□□□ -0.58
GPC3-204ENST00000631057 SYNJ2O15056 1496 aa11.41□□□□□ -0.58
GPC3-204ENST00000631057 ADGBQ8N7X0 1667 aa11.41□□□□□ -0.58
GPC3-204ENST00000631057 CHIC2Q9UKJ5 165 aa11.4□□□□□ -0.58
GPC3-204ENST00000631057 CEP170Q5SW79 1584 aa11.4□□□□□ -0.59
GPC3-204ENST00000631057 CCER2I3L3R5 266 aa11.39□□□□□ -0.59
GPC3-204ENST00000631057 DENND4BO75064 1496 aaPredicted RBP11.39□□□□□ -0.59
GPC3-204ENST00000631057 ANP32CO43423 234 aa11.38□□□□□ -0.59
GPC3-204ENST00000631057 TRIM52Q96A61 297 aa11.38□□□□□ -0.59
GPC3-204ENST00000631057 TROQ12816 1431 aaPredicted RBP11.38□□□□□ -0.59
GPC3-204ENST00000631057 CROCC2H7BZ55 1655 aa11.37□□□□□ -0.59
GPC3-204ENST00000631057 ABCC5O15440 1437 aa11.36□□□□□ -0.59
GPC3-204ENST00000631057 CARMIL2Q6F5E8 1435 aa11.36□□□□□ -0.59
GPC3-204ENST00000631057 ARID3CA6NKF2 412 aa11.36□□□□□ -0.59
GPC3-204ENST00000631057 NUP160Q12769 1436 aa11.35□□□□□ -0.59
GPC3-204ENST00000631057 KCNH8Q96L42 1107 aa11.35□□□□□ -0.59
GPC3-204ENST00000631057 MPHOSPH9Q99550 1183 aa11.35□□□□□ -0.59
GPC3-204ENST00000631057 HIRIP3Q9BW71 556 aaPredicted RBP11.35□□□□□ -0.59
GPC3-204ENST00000631057 SUPT16HQ9Y5B9 1047 aaKnown RBP11.35□□□□□ -0.59
GPC3-204ENST00000631057 CAMSAP2Q08AD1 1489 aa11.34□□□□□ -0.59
GPC3-204ENST00000631057 FBLN2P98095 1184 aa11.33□□□□□ -0.6
GPC3-204ENST00000631057 POLR1AO95602 1720 aaPredicted RBP11.33□□□□□ -0.6
GPC3-204ENST00000631057 KIF14Q15058 1648 aa11.33□□□□□ -0.6
GPC3-204ENST00000631057 PRG4Q92954 1404 aaPredicted RBP11.32□□□□□ -0.6
GPC3-204ENST00000631057 RPRD2Q5VT52 1461 aaKnown RBP11.32□□□□□ -0.6
GPC3-204ENST00000631057 PLB1Q6P1J6 1458 aa11.32□□□□□ -0.6
GPC3-204ENST00000631057 ANKRD30BQ9BXX2 1392 aa11.31□□□□□ -0.6
GPC3-204ENST00000631057 CDC42BPAQ5VT25 1732 aa11.31□□□□□ -0.6
GPC3-204ENST00000631057 ADGRL2O95490 1459 aa11.31□□□□□ -0.6
GPC3-204ENST00000631057 ABCA8O94911 1581 aa11.3□□□□□ -0.6
GPC3-204ENST00000631057 GPATCH8Q9UKJ3 1502 aaKnown RBP11.3□□□□□ -0.6
GPC3-204ENST00000631057 EIF4G2P78344 907 aaKnown RBP eCLIP11.29□□□□□ -0.6
GPC3-204ENST00000631057 MAPK8IP2Q13387 824 aaPredicted RBP11.29□□□□□ -0.6
GPC3-204ENST00000631057 ZNF644Q9H582 1327 aaPredicted RBP11.29□□□□□ -0.6
GPC3-204ENST00000631057 TEX14Q8IWB6 1497 aa11.29□□□□□ -0.6
GPC3-204ENST00000631057 HSPA5P11021 654 aaKnown RBP11.28□□□□□ -0.6
GPC3-204ENST00000631057 CFDP1Q9UEE9 299 aaPredicted RBP11.28□□□□□ -0.6
GPC3-204ENST00000631057 NCOA1Q15788 1441 aa11.28□□□□□ -0.6
GPC3-204ENST00000631057 JPH4Q96JJ6 628 aa11.28□□□□□ -0.6
GPC3-204ENST00000631057 L3MBTL2Q969R5 705 aa11.27□□□□□ -0.61
GPC3-204ENST00000631057 PZPP20742 1482 aa11.27□□□□□ -0.61
GPC3-204ENST00000631057 SHANK2Q9UPX8 1470 aa11.27□□□□□ -0.61
GPC3-204ENST00000631057 PLCB2Q00722 1185 aa11.26□□□□□ -0.61
GPC3-204ENST00000631057 ANKRD30AQ9BXX3 1397 aa11.26□□□□□ -0.61
GPC3-204ENST00000631057 CNTLNQ9NXG0 1405 aa11.25□□□□□ -0.61
GPC3-204ENST00000631057 WASHC2AQ641Q2 1341 aa11.25□□□□□ -0.61
GPC3-204ENST00000631057 ABCC10Q5T3U5 1492 aa11.25□□□□□ -0.61
GPC3-204ENST00000631057 BCANQ96GW7 911 aa11.24□□□□□ -0.61
GPC3-204ENST00000631057 CHD1O14646 1710 aa11.24□□□□□ -0.61
GPC3-204ENST00000631057 KIAA1107Q9UPP5 1409 aa11.23□□□□□ -0.61
GPC3-204ENST00000631057 PLEKHD1A6NEE1 506 aa11.23□□□□□ -0.61
GPC3-204ENST00000631057 ATP10BO94823 1461 aa11.22□□□□□ -0.61
GPC3-204ENST00000631057 NEFLP07196 543 aa11.22□□□□□ -0.61
GPC3-204ENST00000631057 ARHGEF5Q12774 1597 aa11.22□□□□□ -0.61
GPC3-204ENST00000631057 CCDC7Q96M83 1385 aa11.21□□□□□ -0.61
GPC3-204ENST00000631057 MBD5Q9P267 1494 aa11.21□□□□□ -0.61
GPC3-204ENST00000631057 KDM5DQ9BY66 1539 aa11.21□□□□□ -0.62
GPC3-204ENST00000631057 ANKRD50Q9ULJ7 1429 aa11.21□□□□□ -0.62
GPC3-204ENST00000631057 ZNF777Q9ULD5 760 aaPredicted RBP11.2□□□□□ -0.62
GPC3-204ENST00000631057 C9orf84Q5VXU9 1444 aa11.2□□□□□ -0.62
GPC3-204ENST00000631057 SPATA31E1Q6ZUB1 1445 aa11.2□□□□□ -0.62
GPC3-204ENST00000631057 PRKCSHP14314 528 aaPredicted RBP11.2□□□□□ -0.62
GPC3-204ENST00000631057 NBPF8Q3BBV2 869 aa11.2□□□□□ -0.62
GPC3-204ENST00000631057 PREX2Q70Z35 1606 aa11.19□□□□□ -0.62
GPC3-204ENST00000631057 CDC42BPBQ9Y5S2 1711 aa11.18□□□□□ -0.62
GPC3-204ENST00000631057 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
GPC3-204ENST00000631057 PTPRGP23470 1445 aa11.17□□□□□ -0.62
GPC3-204ENST00000631057 ARHGEF12Q9NZN5 1544 aa11.17□□□□□ -0.62
GPC3-204ENST00000631057 SHROOM2Q13796 1616 aa11.16□□□□□ -0.62
GPC3-204ENST00000631057 MYT1Q01538 1121 aa11.16□□□□□ -0.62
GPC3-204ENST00000631057 PKD2Q13563 968 aa11.16□□□□□ -0.62
GPC3-204ENST00000631057 OSCARQ8IYS5 282 aa11.16□□□□□ -0.62
GPC3-204ENST00000631057 TSPY4P0CV99 314 aa11.15□□□□□ -0.62
GPC3-204ENST00000631057 TSPY10P0CW01 314 aa11.15□□□□□ -0.62
GPC3-204ENST00000631057 ATXN8OSP0DMR3 200 aa11.15□□□□□ -0.62
GPC3-204ENST00000631057 CCDC141Q6ZP82 1450 aa11.15□□□□□ -0.62
GPC3-204ENST00000631057 SAMD9LQ8IVG5 1584 aa11.15□□□□□ -0.62
GPC3-204ENST00000631057 KDM5CP41229 1560 aa11.14□□□□□ -0.63
GPC3-204ENST00000631057 CLASP1Q7Z460 1538 aa11.14□□□□□ -0.63
GPC3-204ENST00000631057 UHRF1BP1Q6BDS2 1440 aa11.14□□□□□ -0.63
GPC3-204ENST00000631057 HNRNPUQ00839 825 aaKnown RBP eCLIP11.14□□□□□ -0.638e-7■■□□□ 12.1
GPC3-204ENST00000631057 TAOK2Q9UL54 1235 aa11.14□□□□□ -0.63
GPC3-204ENST00000631057 MAST1Q9Y2H9 1570 aa11.13□□□□□ -0.63
GPC3-204ENST00000631057 NUP155O75694 1391 aa11.13□□□□□ -0.63
GPC3-204ENST00000631057 KIF15Q9NS87 1388 aa11.13□□□□□ -0.63
GPC3-204ENST00000631057 KIF7Q2M1P5 1343 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms