RNA–Protein interactions for RNA: ENST00000627441.2

SPTAN1-212, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-212ENST00000627441 EFCAB5A4FU69 1503 aa14.92□□□□□ -0.02
SPTAN1-212ENST00000627441 C3P01024 1663 aa14.92□□□□□ -0.02
SPTAN1-212ENST00000627441 HECW1Q76N89 1606 aa14.92□□□□□ -0.02
SPTAN1-212ENST00000627441 ATP10BO94823 1461 aa14.91□□□□□ -0.02
SPTAN1-212ENST00000627441 SCAF1Q9H7N4 1312 aaKnown RBP14.9□□□□□ -0.02
SPTAN1-212ENST00000627441 SETD1AO15047 1707 aaKnown RBP14.89□□□□□ -0.03
SPTAN1-212ENST00000627441 CTTNBP2Q8WZ74 1663 aa14.87□□□□□ -0.03
SPTAN1-212ENST00000627441 PIP4K2BP78356 416 aa14.87□□□□□ -0.03
SPTAN1-212ENST00000627441 RGS17Q9UGC6 210 aaPredicted RBP14.87□□□□□ -0.03
SPTAN1-212ENST00000627441 CAMSAP1Q5T5Y3 1602 aa14.86□□□□□ -0.03
SPTAN1-212ENST00000627441 ALKQ9UM73 1620 aa14.83□□□□□ -0.04
SPTAN1-212ENST00000627441 CFAP74Q9C0B2 1584 aa14.81□□□□□ -0.04
SPTAN1-212ENST00000627441 NCKAP5LQ9HCH0 1330 aa14.8□□□□□ -0.04
SPTAN1-212ENST00000627441 MAGI2Q86UL8 1455 aa14.8□□□□□ -0.04
SPTAN1-212ENST00000627441 C9orf84Q5VXU9 1444 aa14.79□□□□□ -0.04
SPTAN1-212ENST00000627441 RAPGEF2Q9Y4G8 1499 aa14.79□□□□□ -0.04
SPTAN1-212ENST00000627441 ATP10AO60312 1499 aa14.77□□□□□ -0.04
SPTAN1-212ENST00000627441 GOLGA3Q08378 1498 aa14.76□□□□□ -0.05
SPTAN1-212ENST00000627441 SUPT6HQ7KZ85 1726 aaKnown RBP14.75□□□□□ -0.05
SPTAN1-212ENST00000627441 SRCAPQ6ZRS2 3230 aa14.74□□□□□ -0.05
SPTAN1-212ENST00000627441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.74□□□□□ -0.05
SPTAN1-212ENST00000627441 TRAPPC8Q9Y2L5 1435 aa14.73□□□□□ -0.05
SPTAN1-212ENST00000627441 POTEAQ6S8J7 498 aa14.72□□□□□ -0.05
SPTAN1-212ENST00000627441 RAPGEF6Q8TEU7 1601 aa14.72□□□□□ -0.05
SPTAN1-212ENST00000627441 ZNF142P52746 1687 aaPredicted RBP14.68□□□□□ -0.06
SPTAN1-212ENST00000627441 SCAPERQ9BY12 1400 aa14.68□□□□□ -0.06
SPTAN1-212ENST00000627441 TOM1O60784 492 aa14.68□□□□□ -0.06
SPTAN1-212ENST00000627441 TCOF1Q13428 1488 aaKnown RBP14.68□□□□□ -0.06
SPTAN1-212ENST00000627441 DIP2CQ9Y2E4 1556 aa14.68□□□□□ -0.06
SPTAN1-212ENST00000627441 MYO3AQ8NEV4 1616 aa14.67□□□□□ -0.06
SPTAN1-212ENST00000627441 P3H3Q8IVL6 736 aa14.67□□□□□ -0.06
SPTAN1-212ENST00000627441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
SPTAN1-212ENST00000627441 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
SPTAN1-212ENST00000627441 ABCA6Q8N139 1617 aa14.65□□□□□ -0.06
SPTAN1-212ENST00000627441 NUP153P49790 1475 aaKnown RBP14.64□□□□□ -0.07
SPTAN1-212ENST00000627441 SUPT5HO00267 1087 aaKnown RBP14.64□□□□□ -0.07
SPTAN1-212ENST00000627441 PLA2R1Q13018 1463 aa14.63□□□□□ -0.07
SPTAN1-212ENST00000627441 CPS1P31327 1500 aa14.62□□□□□ -0.07
SPTAN1-212ENST00000627441 CEP170BQ9Y4F5 1589 aaPredicted RBP14.61□□□□□ -0.07
SPTAN1-212ENST00000627441 PPP6R1Q9UPN7 881 aa14.61□□□□□ -0.07
SPTAN1-212ENST00000627441 REREQ9P2R6 1566 aa14.6□□□□□ -0.07
SPTAN1-212ENST00000627441 POLR1AO95602 1720 aaPredicted RBP14.6□□□□□ -0.07
SPTAN1-212ENST00000627441 KDM5CP41229 1560 aa14.6□□□□□ -0.07
SPTAN1-212ENST00000627441 NEURL4Q96JN8 1562 aa14.6□□□□□ -0.07
SPTAN1-212ENST00000627441 MROH2AA6NES4 1674 aa14.58□□□□□ -0.07
SPTAN1-212ENST00000627441 AGLP35573 1532 aa14.58□□□□□ -0.08
SPTAN1-212ENST00000627441 PKD2Q13563 968 aa14.58□□□□□ -0.08
SPTAN1-212ENST00000627441 STRCP1A6NGW2 1772 aa14.57□□□□□ -0.08
SPTAN1-212ENST00000627441 SHANK2Q9UPX8 1470 aa14.57□□□□□ -0.08
SPTAN1-212ENST00000627441 PTPRKQ15262 1439 aa14.57□□□□□ -0.08
SPTAN1-212ENST00000627441 VWDEQ8N2E2 1590 aa14.56□□□□□ -0.08
SPTAN1-212ENST00000627441 UPF1Q92900 1129 aaKnown RBP eCLIP14.56□□□□□ -0.08
SPTAN1-212ENST00000627441 NPATQ14207 1427 aa14.56□□□□□ -0.08
SPTAN1-212ENST00000627441 SAMD9Q5K651 1589 aa14.56□□□□□ -0.08
SPTAN1-212ENST00000627441 MYO5CQ9NQX4 1742 aa14.53□□□□□ -0.08
SPTAN1-212ENST00000627441 CLTCQ00610 1675 aaKnown RBP14.52□□□□□ -0.08
SPTAN1-212ENST00000627441 PLCH2O75038 1416 aa14.52□□□□□ -0.08
SPTAN1-212ENST00000627441 AFAP1Q8N556 730 aa14.52□□□□□ -0.09
SPTAN1-212ENST00000627441 RNF17Q9BXT8 1623 aaKnown RBP14.52□□□□□ -0.09
SPTAN1-212ENST00000627441 ZNF518AQ6AHZ1 1483 aa14.51□□□□□ -0.09
SPTAN1-212ENST00000627441 ESF1Q9H501 851 aaKnown RBP14.51□□□□□ -0.09
SPTAN1-212ENST00000627441 DNMT1P26358 1616 aaKnown RBP14.51□□□□□ -0.09
SPTAN1-212ENST00000627441 CNTLNQ9NXG0 1405 aa14.5□□□□□ -0.09
SPTAN1-212ENST00000627441 PLEKHD1A6NEE1 506 aa14.5□□□□□ -0.09
SPTAN1-212ENST00000627441 ZMYM3Q14202 1370 aa14.48□□□□□ -0.09
SPTAN1-212ENST00000627441 KIDINS220Q9ULH0 1771 aa14.47□□□□□ -0.09
SPTAN1-212ENST00000627441 MYT1LQ9UL68 1186 aa14.46□□□□□ -0.09
SPTAN1-212ENST00000627441 CDK13Q14004 1512 aaKnown RBP14.46□□□□□ -0.1
SPTAN1-212ENST00000627441 XIRP1Q702N8 1843 aaKnown RBP14.45□□□□□ -0.1
SPTAN1-212ENST00000627441 LRRC7Q96NW7 1537 aa14.45□□□□□ -0.1
SPTAN1-212ENST00000627441 KIF14Q15058 1648 aa14.43□□□□□ -0.1
SPTAN1-212ENST00000627441 MLH3Q9UHC1 1453 aa14.43□□□□□ -0.1
SPTAN1-212ENST00000627441 A2ML1A8K2U0 1454 aa14.41□□□□□ -0.1
SPTAN1-212ENST00000627441 SYNMO15061 1565 aa14.41□□□□□ -0.1
SPTAN1-212ENST00000627441 FAM9AQ8IZU1 332 aaPredicted RBP14.4□□□□□ -0.1
SPTAN1-212ENST00000627441 ITSN2Q9NZM3 1697 aa14.39□□□□□ -0.11
SPTAN1-212ENST00000627441 PRXQ9BXM0 1461 aa14.39□□□□□ -0.11
SPTAN1-212ENST00000627441 CDC42BPBQ9Y5S2 1711 aa14.39□□□□□ -0.11
SPTAN1-212ENST00000627441 ARHGAP5Q13017 1502 aa14.39□□□□□ -0.11
SPTAN1-212ENST00000627441 EFCAB2Q5VUJ9 269 aa14.38□□□□□ -0.11
SPTAN1-212ENST00000627441 TRIM52Q96A61 297 aa14.37□□□□□ -0.11
SPTAN1-212ENST00000627441 IQGAP1P46940 1657 aa14.36□□□□□ -0.11
SPTAN1-212ENST00000627441 ROBO1Q9Y6N7 1651 aa14.34□□□□□ -0.11
SPTAN1-212ENST00000627441 SETBP1Q9Y6X0 1596 aa14.34□□□□□ -0.11
SPTAN1-212ENST00000627441 ABCC1P33527 1531 aa14.33□□□□□ -0.12
SPTAN1-212ENST00000627441 NPHP4O75161 1426 aaPredicted RBP14.32□□□□□ -0.12
SPTAN1-212ENST00000627441 DEPDC5O75140 1603 aa14.32□□□□□ -0.12
SPTAN1-212ENST00000627441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.32□□□□□ -0.12
SPTAN1-212ENST00000627441 RANGAP1P46060 587 aaPredicted RBP14.3□□□□□ -0.12
SPTAN1-212ENST00000627441 MED14O60244 1454 aa14.3□□□□□ -0.12
SPTAN1-212ENST00000627441 LRP6O75581 1613 aa14.3□□□□□ -0.12
SPTAN1-212ENST00000627441 ZC3H13Q5T200 1668 aaKnown RBP14.3□□□□□ -0.12
SPTAN1-212ENST00000627441 PLXNC1O60486 1568 aa14.28□□□□□ -0.12
SPTAN1-212ENST00000627441 FAM135BQ49AJ0 1406 aa14.27□□□□□ -0.12
SPTAN1-212ENST00000627441 SAMD9LQ8IVG5 1584 aa14.26□□□□□ -0.13
SPTAN1-212ENST00000627441 PHLPP1O60346 1717 aa14.26□□□□□ -0.13
SPTAN1-212ENST00000627441 PREX2Q70Z35 1606 aa14.26□□□□□ -0.13
SPTAN1-212ENST00000627441 FBXO31Q5XUX0 539 aaPredicted RBP14.23□□□□□ -0.13
SPTAN1-212ENST00000627441 ANKLE2Q86XL3 938 aa14.23□□□□□ -0.13
SPTAN1-212ENST00000627441 LRRIQ1Q96JM4 1722 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms