RNA–Protein interactions for RNA: ENST00000627018.1

UBE3A-214, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-214ENST00000627018 HECW1Q76N89 1606 aa32.51■■■□□ 2.8
UBE3A-214ENST00000627018 STRCQ7RTU9 1775 aa32.5■■■□□ 2.79
UBE3A-214ENST00000627018 ARHGEF12Q9NZN5 1544 aa32.49■■■□□ 2.79
UBE3A-214ENST00000627018 PLEKHD1A6NEE1 506 aa32.45■■■□□ 2.79
UBE3A-214ENST00000627018 CEBPAP49715 358 aaPredicted RBP32.41■■■□□ 2.78
UBE3A-214ENST00000627018 DMRT2Q9Y5R5 561 aa32.38■■■□□ 2.77
UBE3A-214ENST00000627018 SCAPERQ9BY12 1400 aa32.36■■■□□ 2.77
UBE3A-214ENST00000627018 ATP10AO60312 1499 aa32.35■■■□□ 2.77
UBE3A-214ENST00000627018 C9orf84Q5VXU9 1444 aa32.34■■■□□ 2.77
UBE3A-214ENST00000627018 UHRF1BP1Q6BDS2 1440 aa32.3■■■□□ 2.76
UBE3A-214ENST00000627018 PLCH2O75038 1416 aa32.28■■■□□ 2.76
UBE3A-214ENST00000627018 PTPRTO14522 1441 aa32.26■■■□□ 2.76
UBE3A-214ENST00000627018 LTBP4Q8N2S1 1624 aa32.26■■■□□ 2.76
UBE3A-214ENST00000627018 RANGAP1P46060 587 aaPredicted RBP32.26■■■□□ 2.75
UBE3A-214ENST00000627018 CDK13Q14004 1512 aaKnown RBP32.23■■■□□ 2.75
UBE3A-214ENST00000627018 SETD1BQ9UPS6 1966 aaKnown RBP32.21■■■□□ 2.75
UBE3A-214ENST00000627018 CSRNP3Q8WYN3 585 aa32.21■■■□□ 2.75
UBE3A-214ENST00000627018 IQSEC2Q5JU85 1478 aa32.16■■■□□ 2.74
UBE3A-214ENST00000627018 C3P01024 1663 aa32.14■■■□□ 2.74
UBE3A-214ENST00000627018 MYO5CQ9NQX4 1742 aa32.12■■■□□ 2.73
UBE3A-214ENST00000627018 KDM5CP41229 1560 aa32.12■■■□□ 2.73
UBE3A-214ENST00000627018 ZNF518AQ6AHZ1 1483 aa32.11■■■□□ 2.73
UBE3A-214ENST00000627018 EFCAB2Q5VUJ9 269 aa32.1■■■□□ 2.73
UBE3A-214ENST00000627018 DIP2CQ9Y2E4 1556 aa32.1■■■□□ 2.73
UBE3A-214ENST00000627018 NCOA1Q15788 1441 aa32.07■■■□□ 2.72
UBE3A-214ENST00000627018 REREQ9P2R6 1566 aa32.07■■■□□ 2.72
UBE3A-214ENST00000627018 AFAP1Q8N556 730 aa32.06■■■□□ 2.72
UBE3A-214ENST00000627018 TRAPPC8Q9Y2L5 1435 aa32.02■■■□□ 2.72
UBE3A-214ENST00000627018 KIF14Q15058 1648 aa32.02■■■□□ 2.72
UBE3A-214ENST00000627018 ABCA6Q8N139 1617 aa32.02■■■□□ 2.72
UBE3A-214ENST00000627018 ARHGAP5Q13017 1502 aa31.96■■■□□ 2.71
UBE3A-214ENST00000627018 AGLP35573 1532 aa31.95■■■□□ 2.71
UBE3A-214ENST00000627018 MLH3Q9UHC1 1453 aa31.94■■■□□ 2.7
UBE3A-214ENST00000627018 MYT1LQ9UL68 1186 aa31.92■■■□□ 2.7
UBE3A-214ENST00000627018 CAMSAP1Q5T5Y3 1602 aa31.92■■■□□ 2.7
UBE3A-214ENST00000627018 UBAP1LF5GYI3 381 aa31.88■■■□□ 2.69
UBE3A-214ENST00000627018 ZNF335Q9H4Z2 1342 aaPredicted RBP31.88■■■□□ 2.69
UBE3A-214ENST00000627018 EEA1Q15075 1411 aa31.87■■■□□ 2.69
UBE3A-214ENST00000627018 ESF1Q9H501 851 aaKnown RBP31.87■■■□□ 2.69
UBE3A-214ENST00000627018 TROQ12816 1431 aaPredicted RBP31.85■■■□□ 2.69
UBE3A-214ENST00000627018 CNTLNQ9NXG0 1405 aa31.85■■■□□ 2.69
UBE3A-214ENST00000627018 CDC42BPBQ9Y5S2 1711 aa31.83■■■□□ 2.69
UBE3A-214ENST00000627018 ATP1B4Q9UN42 357 aaPredicted RBP31.83■■■□□ 2.69
UBE3A-214ENST00000627018 NCKAP5LQ9HCH0 1330 aa31.82■■■□□ 2.68
UBE3A-214ENST00000627018 CDK11AQ9UQ88 783 aaPredicted RBP31.82■■■□□ 2.68
UBE3A-214ENST00000627018 NPATQ14207 1427 aa31.81■■■□□ 2.68
UBE3A-214ENST00000627018 ABCC1P33527 1531 aa31.8■■■□□ 2.68
UBE3A-214ENST00000627018 KIDINS220Q9ULH0 1771 aa31.79■■■□□ 2.68
UBE3A-214ENST00000627018 FMN1Q68DA7 1419 aa31.79■■■□□ 2.68
UBE3A-214ENST00000627018 MROH2AA6NES4 1674 aa31.78■■■□□ 2.68
UBE3A-214ENST00000627018 ITSN2Q9NZM3 1697 aa31.76■■■□□ 2.68
UBE3A-214ENST00000627018 CLIP1P30622 1438 aa31.75■■■□□ 2.67
UBE3A-214ENST00000627018 PREX2Q70Z35 1606 aa31.74■■■□□ 2.67
UBE3A-214ENST00000627018 MED1Q15648 1581 aaPredicted RBP31.73■■■□□ 2.67
UBE3A-214ENST00000627018 LRRIQ1Q96JM4 1722 aa31.73■■■□□ 2.67
UBE3A-214ENST00000627018 PLA2R1Q13018 1463 aa31.72■■■□□ 2.67
UBE3A-214ENST00000627018 ZMYM3Q14202 1370 aa31.71■■■□□ 2.67
UBE3A-214ENST00000627018 ZNF142P52746 1687 aaPredicted RBP31.71■■■□□ 2.67
UBE3A-214ENST00000627018 TCOF1Q13428 1488 aaKnown RBP31.71■■■□□ 2.67
UBE3A-214ENST00000627018 MYO3AQ8NEV4 1616 aa31.7■■■□□ 2.66
UBE3A-214ENST00000627018 ARHGAP35Q9NRY4 1499 aa31.7■■■□□ 2.66
UBE3A-214ENST00000627018 PKD2Q13563 968 aa31.66■■■□□ 2.66
UBE3A-214ENST00000627018 HSPA1LP34931 641 aa31.65■■■□□ 2.66
UBE3A-214ENST00000627018 CEP170BQ9Y4F5 1589 aaPredicted RBP31.64■■■□□ 2.66
UBE3A-214ENST00000627018 SAMD9LQ8IVG5 1584 aa31.62■■■□□ 2.65
UBE3A-214ENST00000627018 SUPT6HQ7KZ85 1726 aaKnown RBP31.61■■■□□ 2.65
UBE3A-214ENST00000627018 CLTCQ00610 1675 aaKnown RBP31.61■■■□□ 2.65
UBE3A-214ENST00000627018 PTPRKQ15262 1439 aa31.59■■■□□ 2.65
UBE3A-214ENST00000627018 PPP6R1Q9UPN7 881 aa31.57■■■□□ 2.64
UBE3A-214ENST00000627018 CDC42BPAQ5VT25 1732 aa31.56■■■□□ 2.64
UBE3A-214ENST00000627018 SCAF1Q9H7N4 1312 aaKnown RBP31.53■■■□□ 2.64
UBE3A-214ENST00000627018 PLXNC1O60486 1568 aa31.53■■■□□ 2.64
UBE3A-214ENST00000627018 PIP4K2BP78356 416 aa31.53■■■□□ 2.64
UBE3A-214ENST00000627018 EHMT2Q96KQ7 1210 aa31.5■■■□□ 2.63
UBE3A-214ENST00000627018 SYCP2Q9BX26 1530 aa31.49■■■□□ 2.63
UBE3A-214ENST00000627018 UBTFP17480 764 aaKnown RBP31.48■■■□□ 2.63
UBE3A-214ENST00000627018 SPAG9O60271 1321 aaKnown RBP31.48■■■□□ 2.63
UBE3A-214ENST00000627018 ATP7AQ04656 1500 aa31.46■■■□□ 2.63
UBE3A-214ENST00000627018 DNMT1P26358 1616 aaKnown RBP31.46■■■□□ 2.63
UBE3A-214ENST00000627018 CPS1P31327 1500 aa31.45■■■□□ 2.63
UBE3A-214ENST00000627018 TOM1O60784 492 aa31.45■■■□□ 2.63
UBE3A-214ENST00000627018 A2ML1A8K2U0 1454 aa31.44■■■□□ 2.62
UBE3A-214ENST00000627018 NEURL4Q96JN8 1562 aa31.43■■■□□ 2.62
UBE3A-214ENST00000627018 INO80Q9ULG1 1556 aaPredicted RBP31.43■■■□□ 2.62
UBE3A-214ENST00000627018 A2MP01023 1474 aa31.43■■■□□ 2.62
UBE3A-214ENST00000627018 CCDC18Q5T9S5 1454 aa31.42■■■□□ 2.62
UBE3A-214ENST00000627018 ZNF777Q9ULD5 760 aaPredicted RBP31.42■■■□□ 2.62
UBE3A-214ENST00000627018 ALKQ9UM73 1620 aa31.42■■■□□ 2.62
UBE3A-214ENST00000627018 SHANK2Q9UPX8 1470 aa31.4■■■□□ 2.62
UBE3A-214ENST00000627018 HNRNPMP52272 730 aaKnown RBP eCLIP31.4■■■□□ 2.62
UBE3A-214ENST00000627018 POLR1AO95602 1720 aaPredicted RBP31.39■■■□□ 2.62
UBE3A-214ENST00000627018 GGT6Q6P531 493 aa31.39■■■□□ 2.62
UBE3A-214ENST00000627018 PHF23Q9BUL5 403 aaPredicted RBP31.39■■■□□ 2.62
UBE3A-214ENST00000627018 CASKIN1Q8WXD9 1431 aa31.37■■■□□ 2.61
UBE3A-214ENST00000627018 GPATCH8Q9UKJ3 1502 aaKnown RBP31.36■■■□□ 2.61
UBE3A-214ENST00000627018 VWDEQ8N2E2 1590 aa31.33■■■□□ 2.61
UBE3A-214ENST00000627018 KIAA1107Q9UPP5 1409 aa31.32■■■□□ 2.6
UBE3A-214ENST00000627018 ADGBQ8N7X0 1667 aa31.26■■■□□ 2.6
UBE3A-214ENST00000627018 PLEKHH2Q8IVE3 1493 aa31.25■■■□□ 2.59
UBE3A-214ENST00000627018 TNRQ92752 1358 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms