RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 NUP153P49790 1475 aaKnown RBP12.56□□□□□ -0.4
LINC00963-218ENST00000624138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.56□□□□□ -0.42e-6■■■□□ 16.6
LINC00963-218ENST00000624138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
LINC00963-218ENST00000624138 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
LINC00963-218ENST00000624138 MLECQ14165 292 aa12.52□□□□□ -0.41
LINC00963-218ENST00000624138 PLEKHD1A6NEE1 506 aa12.51□□□□□ -0.41
LINC00963-218ENST00000624138 PTPRTO14522 1441 aa12.51□□□□□ -0.41
LINC00963-218ENST00000624138 ATP10AO60312 1499 aa12.5□□□□□ -0.41
LINC00963-218ENST00000624138 IQSEC2Q5JU85 1478 aa12.5□□□□□ -0.41
LINC00963-218ENST00000624138 LTBP4Q8N2S1 1624 aa12.5□□□□□ -0.41
LINC00963-218ENST00000624138 C3P01024 1663 aa12.49□□□□□ -0.41
LINC00963-218ENST00000624138 CEBPAP49715 358 aaPredicted RBP12.48□□□□□ -0.41
LINC00963-218ENST00000624138 MYO5CQ9NQX4 1742 aa12.48□□□□□ -0.41
LINC00963-218ENST00000624138 C9orf84Q5VXU9 1444 aa12.47□□□□□ -0.41
LINC00963-218ENST00000624138 UHRF1BP1Q6BDS2 1440 aa12.47□□□□□ -0.41
LINC00963-218ENST00000624138 SCAPERQ9BY12 1400 aa12.47□□□□□ -0.41
LINC00963-218ENST00000624138 PLCH2O75038 1416 aa12.45□□□□□ -0.42
LINC00963-218ENST00000624138 REREQ9P2R6 1566 aa12.43□□□□□ -0.42
LINC00963-218ENST00000624138 KDM5CP41229 1560 aa12.41□□□□□ -0.42
LINC00963-218ENST00000624138 DIP2CQ9Y2E4 1556 aa12.39□□□□□ -0.43
LINC00963-218ENST00000624138 CDK13Q14004 1512 aaKnown RBP12.39□□□□□ -0.43
LINC00963-218ENST00000624138 ZNF518AQ6AHZ1 1483 aa12.39□□□□□ -0.43
LINC00963-218ENST00000624138 NCOA1Q15788 1441 aa12.38□□□□□ -0.43
LINC00963-218ENST00000624138 SUPT6HQ7KZ85 1726 aaKnown RBP12.38□□□□□ -0.43
LINC00963-218ENST00000624138 EFCAB2Q5VUJ9 269 aa12.38□□□□□ -0.43
LINC00963-218ENST00000624138 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
LINC00963-218ENST00000624138 TRAPPC8Q9Y2L5 1435 aa12.37□□□□□ -0.43
LINC00963-218ENST00000624138 ABCA6Q8N139 1617 aa12.37□□□□□ -0.43
LINC00963-218ENST00000624138 CDC42BPBQ9Y5S2 1711 aa12.37□□□□□ -0.43
LINC00963-218ENST00000624138 AGLP35573 1532 aa12.37□□□□□ -0.43
LINC00963-218ENST00000624138 MROH2AA6NES4 1674 aa12.36□□□□□ -0.43
LINC00963-218ENST00000624138 CAMSAP1Q5T5Y3 1602 aa12.35□□□□□ -0.43
LINC00963-218ENST00000624138 KIF14Q15058 1648 aa12.34□□□□□ -0.43
LINC00963-218ENST00000624138 AFAP1Q8N556 730 aa12.34□□□□□ -0.43
LINC00963-218ENST00000624138 MLH3Q9UHC1 1453 aa12.34□□□□□ -0.43
LINC00963-218ENST00000624138 RANGAP1P46060 587 aaPredicted RBP12.33□□□□□ -0.44
LINC00963-218ENST00000624138 KIDINS220Q9ULH0 1771 aa12.33□□□□□ -0.44
LINC00963-218ENST00000624138 LRRIQ1Q96JM4 1722 aa12.32□□□□□ -0.44
LINC00963-218ENST00000624138 ZNF142P52746 1687 aaPredicted RBP12.32□□□□□ -0.44
LINC00963-218ENST00000624138 ITSN2Q9NZM3 1697 aa12.32□□□□□ -0.44
LINC00963-218ENST00000624138 CNTLNQ9NXG0 1405 aa12.31□□□□□ -0.44
LINC00963-218ENST00000624138 UBAP1LF5GYI3 381 aa12.31□□□□□ -0.44
LINC00963-218ENST00000624138 ARHGAP5Q13017 1502 aa12.31□□□□□ -0.44
LINC00963-218ENST00000624138 MED1Q15648 1581 aaPredicted RBP12.3□□□□□ -0.44
LINC00963-218ENST00000624138 NPATQ14207 1427 aa12.29□□□□□ -0.44
LINC00963-218ENST00000624138 ESF1Q9H501 851 aaKnown RBP12.29□□□□□ -0.44
LINC00963-218ENST00000624138 ZNF335Q9H4Z2 1342 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-218ENST00000624138 MYT1LQ9UL68 1186 aa12.28□□□□□ -0.44
LINC00963-218ENST00000624138 PREX2Q70Z35 1606 aa12.27□□□□□ -0.44
LINC00963-218ENST00000624138 NCKAP5LQ9HCH0 1330 aa12.27□□□□□ -0.45
LINC00963-218ENST00000624138 PLA2R1Q13018 1463 aa12.27□□□□□ -0.45
LINC00963-218ENST00000624138 MYO3AQ8NEV4 1616 aa12.26□□□□□ -0.45
LINC00963-218ENST00000624138 CLTCQ00610 1675 aaKnown RBP12.26□□□□□ -0.45
LINC00963-218ENST00000624138 CDK11AQ9UQ88 783 aaPredicted RBP12.26□□□□□ -0.45
LINC00963-218ENST00000624138 TROQ12816 1431 aaPredicted RBP12.26□□□□□ -0.45
LINC00963-218ENST00000624138 EEA1Q15075 1411 aa12.26□□□□□ -0.45
LINC00963-218ENST00000624138 ABCC1P33527 1531 aa12.26□□□□□ -0.45
LINC00963-218ENST00000624138 CDC42BPAQ5VT25 1732 aa12.25□□□□□ -0.45
LINC00963-218ENST00000624138 PKD2Q13563 968 aa12.25□□□□□ -0.45
LINC00963-218ENST00000624138 TCOF1Q13428 1488 aaKnown RBP12.25□□□□□ -0.45
LINC00963-218ENST00000624138 POLR1AO95602 1720 aaPredicted RBP12.24□□□□□ -0.45
LINC00963-218ENST00000624138 ZMYM3Q14202 1370 aa12.24□□□□□ -0.45
LINC00963-218ENST00000624138 CEP170BQ9Y4F5 1589 aaPredicted RBP12.23□□□□□ -0.45
LINC00963-218ENST00000624138 FMN1Q68DA7 1419 aa12.23□□□□□ -0.45
LINC00963-218ENST00000624138 CLIP1P30622 1438 aa12.21□□□□□ -0.45
LINC00963-218ENST00000624138 HSPA1LP34931 641 aa12.21□□□□□ -0.45
LINC00963-218ENST00000624138 ATP1B4Q9UN42 357 aaPredicted RBP12.2□□□□□ -0.46
LINC00963-218ENST00000624138 SAMD9LQ8IVG5 1584 aa12.2□□□□□ -0.46
LINC00963-218ENST00000624138 DNMT1P26358 1616 aaKnown RBP12.19□□□□□ -0.46
LINC00963-218ENST00000624138 PTPRKQ15262 1439 aa12.19□□□□□ -0.46
LINC00963-218ENST00000624138 CPS1P31327 1500 aa12.18□□□□□ -0.46
LINC00963-218ENST00000624138 PPP6R1Q9UPN7 881 aa12.18□□□□□ -0.46
LINC00963-218ENST00000624138 ARHGAP35Q9NRY4 1499 aa12.18□□□□□ -0.46
LINC00963-218ENST00000624138 PLXNC1O60486 1568 aa12.18□□□□□ -0.46
LINC00963-218ENST00000624138 TOM1O60784 492 aa12.17□□□□□ -0.46
LINC00963-218ENST00000624138 ALKQ9UM73 1620 aa12.16□□□□□ -0.46
LINC00963-218ENST00000624138 NEURL4Q96JN8 1562 aa12.16□□□□□ -0.46
LINC00963-218ENST00000624138 PIP4K2BP78356 416 aa12.15□□□□□ -0.46
LINC00963-218ENST00000624138 ADGBQ8N7X0 1667 aa12.15□□□□□ -0.46
LINC00963-218ENST00000624138 A2ML1A8K2U0 1454 aa12.14□□□□□ -0.47
LINC00963-218ENST00000624138 SHANK2Q9UPX8 1470 aa12.14□□□□□ -0.47
LINC00963-218ENST00000624138 INO80Q9ULG1 1556 aaPredicted RBP12.13□□□□□ -0.47
LINC00963-218ENST00000624138 SCAF1Q9H7N4 1312 aaKnown RBP12.13□□□□□ -0.47
LINC00963-218ENST00000624138 ATP7AQ04656 1500 aa12.13□□□□□ -0.47
LINC00963-218ENST00000624138 PHF23Q9BUL5 403 aaPredicted RBP12.12□□□□□ -0.47
LINC00963-218ENST00000624138 VWDEQ8N2E2 1590 aa12.12□□□□□ -0.47
LINC00963-218ENST00000624138 STRCP1A6NGW2 1772 aa12.12□□□□□ -0.47
LINC00963-218ENST00000624138 SPAG9O60271 1321 aaKnown RBP12.11□□□□□ -0.47
LINC00963-218ENST00000624138 SYCP2Q9BX26 1530 aa12.11□□□□□ -0.47
LINC00963-218ENST00000624138 A2MP01023 1474 aa12.11□□□□□ -0.47
LINC00963-218ENST00000624138 CCDC18Q5T9S5 1454 aa12.1□□□□□ -0.47
LINC00963-218ENST00000624138 DEPDC5O75140 1603 aa12.09□□□□□ -0.47
LINC00963-218ENST00000624138 HNRNPMP52272 730 aaKnown RBP eCLIP12.08□□□□□ -0.48
LINC00963-218ENST00000624138 GGT6Q6P531 493 aa12.08□□□□□ -0.48
LINC00963-218ENST00000624138 KIAA1107Q9UPP5 1409 aa12.08□□□□□ -0.48
LINC00963-218ENST00000624138 GPATCH8Q9UKJ3 1502 aaKnown RBP12.07□□□□□ -0.48
LINC00963-218ENST00000624138 UBTFP17480 764 aaKnown RBP12.07□□□□□ -0.48
LINC00963-218ENST00000624138 MED14O60244 1454 aa12.07□□□□□ -0.48
LINC00963-218ENST00000624138 CASKIN1Q8WXD9 1431 aa12.06□□□□□ -0.48
LINC00963-218ENST00000624138 XIRP1Q702N8 1843 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms