RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 MPHOSPH9Q99550 1183 aa18.75■□□□□ 0.59
PCDHB17P-202ENST00000623466 NUP153P49790 1475 aaKnown RBP18.75■□□□□ 0.59
PCDHB17P-202ENST00000623466 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
PCDHB17P-202ENST00000623466 ANP32CO43423 234 aa18.74■□□□□ 0.59
PCDHB17P-202ENST00000623466 CHD1O14646 1710 aa18.73■□□□□ 0.59
PCDHB17P-202ENST00000623466 RBM19Q9Y4C8 960 aaKnown RBP18.72■□□□□ 0.59
PCDHB17P-202ENST00000623466 KIAA0556O60303 1618 aa18.71■□□□□ 0.59
PCDHB17P-202ENST00000623466 KDM6BO15054 1643 aa18.7■□□□□ 0.58
PCDHB17P-202ENST00000623466 CEP170Q5SW79 1584 aa18.69■□□□□ 0.58
PCDHB17P-202ENST00000623466 NUP160Q12769 1436 aa18.68■□□□□ 0.58
PCDHB17P-202ENST00000623466 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
PCDHB17P-202ENST00000623466 PLEKHD1A6NEE1 506 aa18.66■□□□□ 0.58
PCDHB17P-202ENST00000623466 L3MBTL2Q969R5 705 aa18.66■□□□□ 0.58
PCDHB17P-202ENST00000623466 TIMELESSQ9UNS1 1208 aa18.65■□□□□ 0.58
PCDHB17P-202ENST00000623466 CCER2I3L3R5 266 aa18.65■□□□□ 0.58
PCDHB17P-202ENST00000623466 IRX6P78412 446 aaPredicted RBP18.64■□□□□ 0.57
PCDHB17P-202ENST00000623466 CNGB1Q14028 1251 aaPredicted RBP18.64■□□□□ 0.57
PCDHB17P-202ENST00000623466 ABCC5O15440 1437 aa18.63■□□□□ 0.57
PCDHB17P-202ENST00000623466 ZNF326Q5BKZ1 582 aaKnown RBP18.62■□□□□ 0.57
PCDHB17P-202ENST00000623466 DENND4BO75064 1496 aaPredicted RBP18.62■□□□□ 0.57
PCDHB17P-202ENST00000623466 DAPK1P53355 1430 aa18.61■□□□□ 0.57
PCDHB17P-202ENST00000623466 CARMIL2Q6F5E8 1435 aa18.61■□□□□ 0.57
PCDHB17P-202ENST00000623466 TCOF1Q13428 1488 aaKnown RBP18.61■□□□□ 0.57
PCDHB17P-202ENST00000623466 MIA2Q96PC5 1412 aa18.61■□□□□ 0.57
PCDHB17P-202ENST00000623466 HNRNPMP52272 730 aaKnown RBP eCLIP18.6■□□□□ 0.57
PCDHB17P-202ENST00000623466 RAPGEF6Q8TEU7 1601 aa18.6■□□□□ 0.57
PCDHB17P-202ENST00000623466 HSPA5P11021 654 aaKnown RBP18.59■□□□□ 0.57
PCDHB17P-202ENST00000623466 HNRNPUQ00839 825 aaKnown RBP eCLIP18.58■□□□□ 0.56
PCDHB17P-202ENST00000623466 TROQ12816 1431 aaPredicted RBP18.57■□□□□ 0.56
PCDHB17P-202ENST00000623466 OSCARQ8IYS5 282 aa18.56■□□□□ 0.56
PCDHB17P-202ENST00000623466 GCC2Q8IWJ2 1684 aa18.56■□□□□ 0.56
PCDHB17P-202ENST00000623466 NBPF8Q3BBV2 869 aa18.55■□□□□ 0.56
PCDHB17P-202ENST00000623466 POLR3GLQ9BT43 218 aa18.53■□□□□ 0.56
PCDHB17P-202ENST00000623466 GPATCH8Q9UKJ3 1502 aaKnown RBP18.53■□□□□ 0.56
PCDHB17P-202ENST00000623466 KIF14Q15058 1648 aa18.53■□□□□ 0.56
PCDHB17P-202ENST00000623466 PTPRGP23470 1445 aa18.52■□□□□ 0.56
PCDHB17P-202ENST00000623466 CLASP1Q7Z460 1538 aa18.52■□□□□ 0.56
PCDHB17P-202ENST00000623466 C11orf95C9JLR9 678 aaPredicted RBP18.52■□□□□ 0.56
PCDHB17P-202ENST00000623466 PKD2Q13563 968 aa18.52■□□□□ 0.55
PCDHB17P-202ENST00000623466 MSH5O43196 834 aa18.51■□□□□ 0.55
PCDHB17P-202ENST00000623466 ATP10BO94823 1461 aa18.51■□□□□ 0.55
PCDHB17P-202ENST00000623466 CAMSAP2Q08AD1 1489 aa18.49■□□□□ 0.55
PCDHB17P-202ENST00000623466 WASHC2AQ641Q2 1341 aa18.49■□□□□ 0.55
PCDHB17P-202ENST00000623466 EIF4G2P78344 907 aaKnown RBP eCLIP18.48■□□□□ 0.55
PCDHB17P-202ENST00000623466 TSPY4P0CV99 314 aa18.48■□□□□ 0.55
PCDHB17P-202ENST00000623466 TSPY10P0CW01 314 aa18.48■□□□□ 0.55
PCDHB17P-202ENST00000623466 KDM2AQ9Y2K7 1162 aa18.47■□□□□ 0.55
PCDHB17P-202ENST00000623466 SALL2Q9Y467 1007 aaPredicted RBP18.47■□□□□ 0.55
PCDHB17P-202ENST00000623466 CCDC136Q96JN2 1154 aa18.47■□□□□ 0.55
PCDHB17P-202ENST00000623466 ANKRD30BQ9BXX2 1392 aa18.46■□□□□ 0.55
PCDHB17P-202ENST00000623466 NCOA1Q15788 1441 aa18.46■□□□□ 0.55
PCDHB17P-202ENST00000623466 KDM5BQ9UGL1 1544 aa18.46■□□□□ 0.55
PCDHB17P-202ENST00000623466 AKNAQ7Z591 1439 aa18.46■□□□□ 0.55
PCDHB17P-202ENST00000623466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.46■□□□□ 0.54
PCDHB17P-202ENST00000623466 SHROOM2Q13796 1616 aa18.45■□□□□ 0.54
PCDHB17P-202ENST00000623466 ADCY10Q96PN6 1610 aa18.45■□□□□ 0.54
PCDHB17P-202ENST00000623466 CCDC184Q52MB2 194 aa18.43■□□□□ 0.54
PCDHB17P-202ENST00000623466 DEKP35659 375 aaKnown RBP18.43■□□□□ 0.54
PCDHB17P-202ENST00000623466 ROCK1Q13464 1354 aa18.43■□□□□ 0.54
PCDHB17P-202ENST00000623466 DNMT1P26358 1616 aaKnown RBP18.42■□□□□ 0.54
PCDHB17P-202ENST00000623466 NUP155O75694 1391 aa18.42■□□□□ 0.54
PCDHB17P-202ENST00000623466 SENP3-EIF4A1A0A087X0R7 540 aa18.41■□□□□ 0.54
PCDHB17P-202ENST00000623466 ABCA8O94911 1581 aa18.39■□□□□ 0.54
PCDHB17P-202ENST00000623466 ANKRD30AQ9BXX3 1397 aa18.39■□□□□ 0.54
PCDHB17P-202ENST00000623466 ANKRD50Q9ULJ7 1429 aa18.38■□□□□ 0.53
PCDHB17P-202ENST00000623466 ITSN2Q9NZM3 1697 aa18.38■□□□□ 0.53
PCDHB17P-202ENST00000623466 ERCC6L2Q5T890 1561 aa18.38■□□□□ 0.53
PCDHB17P-202ENST00000623466 FAM9BQ8IZU0 186 aa18.37■□□□□ 0.53
PCDHB17P-202ENST00000623466 RGL3Q3MIN7 710 aa18.36■□□□□ 0.53
PCDHB17P-202ENST00000623466 PZPP20742 1482 aa18.35■□□□□ 0.53
PCDHB17P-202ENST00000623466 C9orf84Q5VXU9 1444 aa18.33■□□□□ 0.53
PCDHB17P-202ENST00000623466 CROCC2H7BZ55 1655 aa18.33■□□□□ 0.53
PCDHB17P-202ENST00000623466 RPRD2Q5VT52 1461 aaKnown RBP18.32■□□□□ 0.52
PCDHB17P-202ENST00000623466 ABCC10Q5T3U5 1492 aa18.32■□□□□ 0.52
PCDHB17P-202ENST00000623466 KIF15Q9NS87 1388 aa18.31■□□□□ 0.52
PCDHB17P-202ENST00000623466 B4GALNT3Q6L9W6 998 aa18.31■□□□□ 0.52
PCDHB17P-202ENST00000623466 DCAF11Q8TEB1 546 aa18.31■□□□□ 0.52
PCDHB17P-202ENST00000623466 CDC42BPAQ5VT25 1732 aa18.31■□□□□ 0.52
PCDHB17P-202ENST00000623466 ADGBQ8N7X0 1667 aa18.31■□□□□ 0.52
PCDHB17P-202ENST00000623466 UBE2Q2Q8WVN8 375 aa18.29■□□□□ 0.52
PCDHB17P-202ENST00000623466 KIF7Q2M1P5 1343 aa18.28■□□□□ 0.52
PCDHB17P-202ENST00000623466 FANCIQ9NVI1 1328 aa18.28■□□□□ 0.52
PCDHB17P-202ENST00000623466 MRS2Q9HD23 443 aa18.27■□□□□ 0.52
PCDHB17P-202ENST00000623466 KIAA1107Q9UPP5 1409 aa18.27■□□□□ 0.51
PCDHB17P-202ENST00000623466 TEX14Q8IWB6 1497 aa18.26■□□□□ 0.51
PCDHB17P-202ENST00000623466 PPP4R2Q9NY27 417 aa18.26■□□□□ 0.51
PCDHB17P-202ENST00000623466 MYT1LQ9UL68 1186 aa18.26■□□□□ 0.51
PCDHB17P-202ENST00000623466 CCDC7Q96M83 1385 aa18.26■□□□□ 0.51
PCDHB17P-202ENST00000623466 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.25■□□□□ 0.51
PCDHB17P-202ENST00000623466 PRKRIP1Q9H875 184 aaPredicted RBP18.25■□□□□ 0.51
PCDHB17P-202ENST00000623466 CARD11Q9BXL7 1154 aa18.23■□□□□ 0.51
PCDHB17P-202ENST00000623466 AFAP1Q8N556 730 aa18.22■□□□□ 0.51
PCDHB17P-202ENST00000623466 MBD5Q9P267 1494 aa18.22■□□□□ 0.51
PCDHB17P-202ENST00000623466 CNTLNQ9NXG0 1405 aa18.2■□□□□ 0.5
PCDHB17P-202ENST00000623466 ADGRL2O95490 1459 aa18.2■□□□□ 0.5
PCDHB17P-202ENST00000623466 ARHGAP5Q13017 1502 aa18.2■□□□□ 0.5
PCDHB17P-202ENST00000623466 ST20-MTHFSA0A0A6YYL1 179 aa18.19■□□□□ 0.5
PCDHB17P-202ENST00000623466 USP47Q96K76 1375 aa18.19■□□□□ 0.5
PCDHB17P-202ENST00000623466 NBPF1Q3BBV0 1214 aa18.17■□□□□ 0.5
PCDHB17P-202ENST00000623466 RTN4Q9NQC3 1192 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms