RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 CAMSAP1Q5T5Y3 1602 aa9.53□□□□□ -0.88
EBF1-211ENST00000622875 PTPRKQ15262 1439 aa9.53□□□□□ -0.88
EBF1-211ENST00000622875 TCOF1Q13428 1488 aaKnown RBP9.51□□□□□ -0.89
EBF1-211ENST00000622875 UPF1Q92900 1129 aaKnown RBP eCLIP9.51□□□□□ -0.89
EBF1-211ENST00000622875 REREQ9P2R6 1566 aa9.5□□□□□ -0.89
EBF1-211ENST00000622875 TOM1O60784 492 aa9.5□□□□□ -0.89
EBF1-211ENST00000622875 LRP5O75197 1615 aa9.5□□□□□ -0.89
EBF1-211ENST00000622875 MROH2AA6NES4 1674 aa9.49□□□□□ -0.89
EBF1-211ENST00000622875 RNF17Q9BXT8 1623 aaKnown RBP9.49□□□□□ -0.89
EBF1-211ENST00000622875 ZNF335Q9H4Z2 1342 aaPredicted RBP9.49□□□□□ -0.89
EBF1-211ENST00000622875 DENND4BO75064 1496 aaPredicted RBP9.48□□□□□ -0.89
EBF1-211ENST00000622875 POTEAQ6S8J7 498 aa9.48□□□□□ -0.89
EBF1-211ENST00000622875 RAPGEF3O95398 923 aa9.47□□□□□ -0.89
EBF1-211ENST00000622875 ERICH6Q7L0X2 663 aa9.47□□□□□ -0.89
EBF1-211ENST00000622875 TRAPPC8Q9Y2L5 1435 aa9.46□□□□□ -0.89
EBF1-211ENST00000622875 SUPT6HQ7KZ85 1726 aaKnown RBP9.46□□□□□ -0.89
EBF1-211ENST00000622875 RAPGEF2Q9Y4G8 1499 aa9.46□□□□□ -0.89
EBF1-211ENST00000622875 POLR1AO95602 1720 aaPredicted RBP9.46□□□□□ -0.9
EBF1-211ENST00000622875 CDK12Q9NYV4 1490 aaPredicted RBP9.45□□□□□ -0.9
EBF1-211ENST00000622875 SYNMO15061 1565 aa9.45□□□□□ -0.9
EBF1-211ENST00000622875 NPATQ14207 1427 aa9.45□□□□□ -0.9
EBF1-211ENST00000622875 C9orf84Q5VXU9 1444 aa9.44□□□□□ -0.9
EBF1-211ENST00000622875 HECW1Q76N89 1606 aa9.44□□□□□ -0.9
EBF1-211ENST00000622875 AGLP35573 1532 aa9.43□□□□□ -0.9
EBF1-211ENST00000622875 PKD2Q13563 968 aa9.43□□□□□ -0.9
EBF1-211ENST00000622875 ATP10AO60312 1499 aa9.42□□□□□ -0.9
EBF1-211ENST00000622875 MYO3AQ8NEV4 1616 aa9.42□□□□□ -0.9
EBF1-211ENST00000622875 VWDEQ8N2E2 1590 aa9.42□□□□□ -0.9
EBF1-211ENST00000622875 SHANK2Q9UPX8 1470 aa9.4□□□□□ -0.9
EBF1-211ENST00000622875 LRRC7Q96NW7 1537 aa9.4□□□□□ -0.91
EBF1-211ENST00000622875 RAPGEF6Q8TEU7 1601 aa9.38□□□□□ -0.91
EBF1-211ENST00000622875 NEURL4Q96JN8 1562 aa9.38□□□□□ -0.91
EBF1-211ENST00000622875 PIP4K2BP78356 416 aa9.37□□□□□ -0.91
EBF1-211ENST00000622875 SLC24A1O60721 1099 aa9.37□□□□□ -0.91
EBF1-211ENST00000622875 CEP170BQ9Y4F5 1589 aaPredicted RBP9.36□□□□□ -0.91
EBF1-211ENST00000622875 IGF1RP08069 1367 aa9.36□□□□□ -0.91
EBF1-211ENST00000622875 CNTLNQ9NXG0 1405 aa9.36□□□□□ -0.91
EBF1-211ENST00000622875 SETBP1Q9Y6X0 1596 aa9.36□□□□□ -0.91
EBF1-211ENST00000622875 CEBPAP49715 358 aaPredicted RBP9.35□□□□□ -0.91
EBF1-211ENST00000622875 PLPPR3Q6T4P5 718 aa9.34□□□□□ -0.91
EBF1-211ENST00000622875 SCAF1Q9H7N4 1312 aaKnown RBP9.33□□□□□ -0.92
EBF1-211ENST00000622875 KCNH8Q96L42 1107 aa9.33□□□□□ -0.92
EBF1-211ENST00000622875 CDK13Q14004 1512 aaKnown RBP9.33□□□□□ -0.92
EBF1-211ENST00000622875 STRCP1A6NGW2 1772 aa9.33□□□□□ -0.92
EBF1-211ENST00000622875 DEPDC5O75140 1603 aa9.32□□□□□ -0.92
EBF1-211ENST00000622875 KDM5CP41229 1560 aa9.31□□□□□ -0.92
EBF1-211ENST00000622875 ATP10BO94823 1461 aa9.31□□□□□ -0.92
EBF1-211ENST00000622875 FOXD1Q16676 465 aa9.31□□□□□ -0.92
EBF1-211ENST00000622875 NCKAP5LQ9HCH0 1330 aa9.31□□□□□ -0.92
EBF1-211ENST00000622875 NHSL1Q5SYE7 1610 aa9.31□□□□□ -0.92
EBF1-211ENST00000622875 DIP2CQ9Y2E4 1556 aa9.3□□□□□ -0.92
EBF1-211ENST00000622875 XIRP1Q702N8 1843 aaKnown RBP9.3□□□□□ -0.92
EBF1-211ENST00000622875 PPP6R1Q9UPN7 881 aa9.3□□□□□ -0.92
EBF1-211ENST00000622875 GOLGA3Q08378 1498 aa9.29□□□□□ -0.92
EBF1-211ENST00000622875 CTTNBP2Q8WZ74 1663 aa9.29□□□□□ -0.92
EBF1-211ENST00000622875 FAM135BQ49AJ0 1406 aa9.28□□□□□ -0.92
EBF1-211ENST00000622875 DNMT1P26358 1616 aaKnown RBP9.28□□□□□ -0.92
EBF1-211ENST00000622875 MED14O60244 1454 aa9.27□□□□□ -0.93
EBF1-211ENST00000622875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.26□□□□□ -0.93
EBF1-211ENST00000622875 MLECQ14165 292 aa9.25□□□□□ -0.93
EBF1-211ENST00000622875 ABCA6Q8N139 1617 aa9.24□□□□□ -0.93
EBF1-211ENST00000622875 KIF27Q86VH2 1401 aa9.24□□□□□ -0.93
EBF1-211ENST00000622875 A2ML1A8K2U0 1454 aa9.24□□□□□ -0.93
EBF1-211ENST00000622875 RBM33Q96EV2 1170 aaKnown RBP9.23□□□□□ -0.93
EBF1-211ENST00000622875 CARMIL1Q5VZK9 1371 aa9.23□□□□□ -0.93
EBF1-211ENST00000622875 ZRANB1Q9UGI0 708 aa9.23□□□□□ -0.93
EBF1-211ENST00000622875 SHPRHQ149N8 1683 aa9.22□□□□□ -0.93
EBF1-211ENST00000622875 IQGAP1P46940 1657 aa9.22□□□□□ -0.93
EBF1-211ENST00000622875 KIF14Q15058 1648 aa9.22□□□□□ -0.93
EBF1-211ENST00000622875 ROBO1Q9Y6N7 1651 aa9.22□□□□□ -0.93
EBF1-211ENST00000622875 ZNF772Q68DY9 489 aaPredicted RBP9.19□□□□□ -0.94
EBF1-211ENST00000622875 ZC3H13Q5T200 1668 aaKnown RBP9.19□□□□□ -0.94
EBF1-211ENST00000622875 PHLPP1O60346 1717 aa9.19□□□□□ -0.94
EBF1-211ENST00000622875 LRRC9Q6ZRR7 1453 aa9.19□□□□□ -0.94
EBF1-211ENST00000622875 ZNF518AQ6AHZ1 1483 aa9.19□□□□□ -0.94
EBF1-211ENST00000622875 MLH3Q9UHC1 1453 aa9.18□□□□□ -0.94
EBF1-211ENST00000622875 COL16A1Q07092 1604 aaPredicted RBP9.17□□□□□ -0.94
EBF1-211ENST00000622875 SLC34A2O95436 690 aa9.17□□□□□ -0.94
EBF1-211ENST00000622875 CLTCQ00610 1675 aaKnown RBP9.17□□□□□ -0.94
EBF1-211ENST00000622875 LRP6O75581 1613 aa9.17□□□□□ -0.94
EBF1-211ENST00000622875 KDM5DQ9BY66 1539 aa9.17□□□□□ -0.94
EBF1-211ENST00000622875 NWD1Q149M9 1564 aa9.16□□□□□ -0.94
EBF1-211ENST00000622875 SCAPERQ9BY12 1400 aa9.16□□□□□ -0.94
EBF1-211ENST00000622875 RGS12O14924 1447 aa9.15□□□□□ -0.94
EBF1-211ENST00000622875 FGD6Q6ZV73 1430 aa9.15□□□□□ -0.94
EBF1-211ENST00000622875 MYO5CQ9NQX4 1742 aa9.15□□□□□ -0.94
EBF1-211ENST00000622875 JCADQ9P266 1359 aa9.15□□□□□ -0.94
EBF1-211ENST00000622875 PCDH10Q9P2E7 1040 aa9.14□□□□□ -0.95
EBF1-211ENST00000622875 ATAD2Q6PL18 1390 aa9.12□□□□□ -0.95
EBF1-211ENST00000622875 ZMYM3Q14202 1370 aa9.12□□□□□ -0.95
EBF1-211ENST00000622875 PLCH2O75038 1416 aa9.12□□□□□ -0.95
EBF1-211ENST00000622875 NPHP4O75161 1426 aaPredicted RBP9.12□□□□□ -0.95
EBF1-211ENST00000622875 RXRBP28702 533 aa9.12□□□□□ -0.95
EBF1-211ENST00000622875 SPATA31A6Q5VVP1 1343 aa9.12□□□□□ -0.95
EBF1-211ENST00000622875 ITSN2Q9NZM3 1697 aa9.11□□□□□ -0.95
EBF1-211ENST00000622875 KIDINS220Q9ULH0 1771 aa9.11□□□□□ -0.95
EBF1-211ENST00000622875 TRIM52Q96A61 297 aa9.1□□□□□ -0.95
EBF1-211ENST00000622875 ATP7AQ04656 1500 aa9.09□□□□□ -0.95
EBF1-211ENST00000622875 CCDC125Q86Z20 511 aa9.09□□□□□ -0.95
EBF1-211ENST00000622875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms